RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 AMTP48728 403 aa11.59□□□□□ -0.55
RHBDD3-207ENST00000496342 IFITM2Q01629 132 aa11.59□□□□□ -0.55
RHBDD3-207ENST00000496342 COTL1Q14019 142 aa11.59□□□□□ -0.55
RHBDD3-207ENST00000496342 RMI2Q96E14 147 aa11.59□□□□□ -0.55
RHBDD3-207ENST00000496342 TMEM191AQ9H0A3 160 aa11.59□□□□□ -0.55
RHBDD3-207ENST00000496342 IGLV4-60A0A075B6I1 120 aa11.58□□□□□ -0.56
RHBDD3-207ENST00000496342 NCR2O95944 276 aa11.58□□□□□ -0.56
RHBDD3-207ENST00000496342 HAMPP81172 84 aa11.58□□□□□ -0.56
RHBDD3-207ENST00000496342 LINC00269Q8N2A0 174 aa11.58□□□□□ -0.56
RHBDD3-207ENST00000496342 C20orf203Q8NBC4 194 aa11.58□□□□□ -0.56
RHBDD3-207ENST00000496342 SMIM27A0A1W2PRY6 76 aa11.57□□□□□ -0.56
RHBDD3-207ENST00000496342 SDHAF1A6NFY7 115 aa11.57□□□□□ -0.56
RHBDD3-207ENST00000496342 RAB4AP20338 218 aa11.57□□□□□ -0.56
RHBDD3-207ENST00000496342 GCSHP23434 173 aa11.57□□□□□ -0.56
RHBDD3-207ENST00000496342 RAB14P61106 215 aa11.57□□□□□ -0.56
RHBDD3-207ENST00000496342 PKIAP61925 76 aa11.57□□□□□ -0.56
RHBDD3-207ENST00000496342 RIGQ13278 110 aa11.57□□□□□ -0.56
RHBDD3-207ENST00000496342 C1orf43Q9BWL3 253 aa11.57□□□□□ -0.56
RHBDD3-207ENST00000496342 NAT8BQ9UHF3 227 aa11.57□□□□□ -0.56
RHBDD3-207ENST00000496342 HLA-DQA1P01909 254 aa11.56□□□□□ -0.56
RHBDD3-207ENST00000496342 Q0VG73 95 aa11.56□□□□□ -0.56
RHBDD3-207ENST00000496342 FRZBQ92765 325 aa11.56□□□□□ -0.56
RHBDD3-207ENST00000496342 IGLV10-54A0A075B6I4 117 aa11.55□□□□□ -0.56
RHBDD3-207ENST00000496342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.55□□□□□ -0.56
RHBDD3-207ENST00000496342 IGKV2-29A2NJV5 120 aaPredicted RBP11.55□□□□□ -0.56
RHBDD3-207ENST00000496342 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
RHBDD3-207ENST00000496342 PRR34Q9NV39 138 aa11.55□□□□□ -0.56
RHBDD3-207ENST00000496342 COX11Q9Y6N1 276 aa11.55□□□□□ -0.56
RHBDD3-207ENST00000496342 UBE2L6O14933 153 aa11.54□□□□□ -0.56
RHBDD3-207ENST00000496342 CAMPP49913 170 aa11.54□□□□□ -0.56
RHBDD3-207ENST00000496342 XGP55808 180 aa11.54□□□□□ -0.56
RHBDD3-207ENST00000496342 LINC01620Q4KN68 170 aa11.54□□□□□ -0.56
RHBDD3-207ENST00000496342 CLLU1Q5K131 121 aa11.54□□□□□ -0.56
RHBDD3-207ENST00000496342 MRPL54Q6P161 138 aaKnown RBP11.54□□□□□ -0.56
RHBDD3-207ENST00000496342 TMEM242Q9NWH2 141 aa11.54□□□□□ -0.56
RHBDD3-207ENST00000496342 TRBV6-5A0A0K0K1A5 114 aa11.53□□□□□ -0.56
RHBDD3-207ENST00000496342 APCSP02743 223 aa11.53□□□□□ -0.56
RHBDD3-207ENST00000496342 REG3AQ06141 175 aa11.53□□□□□ -0.56
RHBDD3-207ENST00000496342 MIAQ16674 131 aa11.53□□□□□ -0.56
RHBDD3-207ENST00000496342 KRTAP26-1Q6PEX3 210 aa11.53□□□□□ -0.56
RHBDD3-207ENST00000496342 MRAP2Q96G30 205 aa11.52□□□□□ -0.57
RHBDD3-207ENST00000496342 TMEM70Q9BUB7 260 aa11.52□□□□□ -0.57
RHBDD3-207ENST00000496342 ST20Q9HBF5 79 aa11.52□□□□□ -0.57
RHBDD3-207ENST00000496342 TSHBP01222 138 aa11.51□□□□□ -0.57
RHBDD3-207ENST00000496342 PMCHP20382 165 aa11.51□□□□□ -0.57
RHBDD3-207ENST00000496342 MRPL51Q4U2R6 128 aaKnown RBP11.51□□□□□ -0.57
RHBDD3-207ENST00000496342 NRACQ8N912 160 aa11.51□□□□□ -0.57
RHBDD3-207ENST00000496342 FAM30AQ9NZY2 134 aa11.51□□□□□ -0.57
RHBDD3-207ENST00000496342 IGKV3OR2-268A0A0C4DH90 116 aa11.5□□□□□ -0.57
RHBDD3-207ENST00000496342 A0A1B0GUV1 79 aa11.5□□□□□ -0.57
RHBDD3-207ENST00000496342 USP17L23D6RBM5 183 aa11.5□□□□□ -0.57
RHBDD3-207ENST00000496342 I3L3M4 83 aa11.5□□□□□ -0.57
RHBDD3-207ENST00000496342 FAM104BQ5XKR9 115 aa11.5□□□□□ -0.57
RHBDD3-207ENST00000496342 A0A1B0GXF2 115 aa11.49□□□□□ -0.57
RHBDD3-207ENST00000496342 ADCYAP1P18509 176 aa11.49□□□□□ -0.57
RHBDD3-207ENST00000496342 POLR2KP53803 58 aaKnown RBP11.49□□□□□ -0.57
RHBDD3-207ENST00000496342 RNASEKQ6P5S7 137 aaKnown RBP11.49□□□□□ -0.57
RHBDD3-207ENST00000496342 FGF6P10767 208 aa11.48□□□□□ -0.57
RHBDD3-207ENST00000496342 AMMECR1LQ6DCA0 310 aa11.48□□□□□ -0.57
RHBDD3-207ENST00000496342 Q8N1X5 172 aa11.48□□□□□ -0.57
RHBDD3-207ENST00000496342 HBBP68871 147 aa11.47□□□□□ -0.57
RHBDD3-207ENST00000496342 PCLOQ9Y6V0 5065 aa11.46□□□□□ -0.57
RHBDD3-207ENST00000496342 ESDP10768 282 aa11.46□□□□□ -0.57
RHBDD3-207ENST00000496342 TRBV27A0A0K0K1C4 114 aa11.45□□□□□ -0.58
RHBDD3-207ENST00000496342 SMR3BP02814 79 aaPredicted RBP11.45□□□□□ -0.58
RHBDD3-207ENST00000496342 PRSS1P07477 247 aa11.45□□□□□ -0.58
RHBDD3-207ENST00000496342 SUMO2P61956 95 aaKnown RBP11.45□□□□□ -0.58
RHBDD3-207ENST00000496342 PNRC1Q12796 327 aaPredicted RBP11.45□□□□□ -0.58
RHBDD3-207ENST00000496342 ABCA13Q86UQ4 5058 aa11.45□□□□□ -0.58
RHBDD3-207ENST00000496342 A0A1B0GW15 77 aa11.44□□□□□ -0.58
RHBDD3-207ENST00000496342 D6R8Y8 96 aa11.44□□□□□ -0.58
RHBDD3-207ENST00000496342 PPP1R2P9O14990 202 aa11.44□□□□□ -0.58
RHBDD3-207ENST00000496342 DNAH8Q96JB1 4490 aa11.43□□□□□ -0.58
RHBDD3-207ENST00000496342 NPYP01303 97 aa11.43□□□□□ -0.58
RHBDD3-207ENST00000496342 CKS2P33552 79 aa11.43□□□□□ -0.58
RHBDD3-207ENST00000496342 TRAV8-4A0A0B4J246 113 aa11.42□□□□□ -0.58
RHBDD3-207ENST00000496342 C7orf77A4D0Y5 90 aa11.42□□□□□ -0.58
RHBDD3-207ENST00000496342 GAGE12HA6NDE8 117 aa11.42□□□□□ -0.58
RHBDD3-207ENST00000496342 H7C423 109 aa11.42□□□□□ -0.58
RHBDD3-207ENST00000496342 C14orf177Q52M58 125 aa11.42□□□□□ -0.58
RHBDD3-207ENST00000496342 COMMD7Q86VX2 200 aa11.42□□□□□ -0.58
RHBDD3-207ENST00000496342 VCYO14598 125 aa11.41□□□□□ -0.58
RHBDD3-207ENST00000496342 TNFRSF6BO95407 300 aa11.41□□□□□ -0.58
RHBDD3-207ENST00000496342 MT-ND4LP03901 98 aa11.41□□□□□ -0.58
RHBDD3-207ENST00000496342 FCER1GP30273 86 aa11.41□□□□□ -0.58
RHBDD3-207ENST00000496342 ANAPC16Q96DE5 110 aa11.41□□□□□ -0.58
RHBDD3-207ENST00000496342 TMEM218A2RU14 115 aa11.4□□□□□ -0.58
RHBDD3-207ENST00000496342 F8W036 122 aa11.4□□□□□ -0.58
RHBDD3-207ENST00000496342 S100A8P05109 93 aa11.4□□□□□ -0.58
RHBDD3-207ENST00000496342 UQCC3Q6UW78 93 aa11.4□□□□□ -0.58
RHBDD3-207ENST00000496342 Q6ZSA8 131 aa11.4□□□□□ -0.58
RHBDD3-207ENST00000496342 ATP5L2Q7Z4Y8 100 aa11.4□□□□□ -0.58
RHBDD3-207ENST00000496342 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
RHBDD3-207ENST00000496342 LINC00862A6NCI5 91 aa11.39□□□□□ -0.59
RHBDD3-207ENST00000496342 PPP1R17O96001 155 aa11.39□□□□□ -0.59
RHBDD3-207ENST00000496342 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
RHBDD3-207ENST00000496342 RNASE13Q5GAN3 156 aaKnown RBP11.39□□□□□ -0.59
RHBDD3-207ENST00000496342 Q5VSD8 79 aa11.39□□□□□ -0.59
RHBDD3-207ENST00000496342 OR5A1Q8NGJ0 315 aa11.39□□□□□ -0.59
RHBDD3-207ENST00000496342 BTF3L4Q96K17 158 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms