RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 hDV102S1A0JD36 115 aa11.61□□□□□ -0.55
HLA-A-208ENST00000496081 IGIPA6NJ69 53 aa11.61□□□□□ -0.55
HLA-A-208ENST00000496081 FAM222AQ5U5X8 452 aa11.61□□□□□ -0.55
HLA-A-208ENST00000496081 PHLDA1Q8WV24 401 aaPredicted RBP11.61□□□□□ -0.55
HLA-A-208ENST00000496081 TRGV4A0A0C4DH28 118 aa11.6□□□□□ -0.55
HLA-A-208ENST00000496081 IGHV3-38A0A0C4DH36 116 aa11.6□□□□□ -0.55
HLA-A-208ENST00000496081 TRBV6-4A0A1B0GX49 114 aa11.6□□□□□ -0.55
HLA-A-208ENST00000496081 LYRM9A8MSI8 78 aa11.6□□□□□ -0.55
HLA-A-208ENST00000496081 RPL36AP83881 106 aaKnown RBP11.6□□□□□ -0.55
HLA-A-208ENST00000496081 RPL36ALQ969Q0 106 aaKnown RBP11.6□□□□□ -0.55
HLA-A-208ENST00000496081 BAALCQ8WXS3 180 aa11.59□□□□□ -0.55
HLA-A-208ENST00000496081 TRAV12-1A0A0B4J245 112 aa11.59□□□□□ -0.55
HLA-A-208ENST00000496081 DEFA6Q01524 100 aa11.59□□□□□ -0.55
HLA-A-208ENST00000496081 TIMM17AQ99595 171 aa11.59□□□□□ -0.55
HLA-A-208ENST00000496081 DNAH3Q8TD57 4116 aa11.58□□□□□ -0.56
HLA-A-208ENST00000496081 A0A087WX48 190 aa11.58□□□□□ -0.56
HLA-A-208ENST00000496081 GAGE12JA6NER3 117 aa11.58□□□□□ -0.56
HLA-A-208ENST00000496081 GAGE1Q13065 139 aa11.58□□□□□ -0.56
HLA-A-208ENST00000496081 GAGE4Q13068 117 aa11.58□□□□□ -0.56
HLA-A-208ENST00000496081 GAGE5Q13069 117 aa11.58□□□□□ -0.56
HLA-A-208ENST00000496081 GAGE13Q4V321 117 aa11.58□□□□□ -0.56
HLA-A-208ENST00000496081 TMEM141Q96I45 108 aa11.58□□□□□ -0.56
HLA-A-208ENST00000496081 UBE2D3P61077 147 aa11.57□□□□□ -0.56
HLA-A-208ENST00000496081 UBE2D2P62837 147 aa11.57□□□□□ -0.56
HLA-A-208ENST00000496081 CTAG1AP78358 180 aa11.57□□□□□ -0.56
HLA-A-208ENST00000496081 COTL1Q14019 142 aa11.57□□□□□ -0.56
HLA-A-208ENST00000496081 CHCHD7Q9BUK0 85 aa11.57□□□□□ -0.56
HLA-A-208ENST00000496081 MRPL35Q9NZE8 188 aaKnown RBP11.57□□□□□ -0.56
HLA-A-208ENST00000496081 NOTCH1P46531 2555 aa11.57□□□□□ -0.56
HLA-A-208ENST00000496081 LOC100131303A0A0U1RQF7 123 aa11.56□□□□□ -0.56
HLA-A-208ENST00000496081 HSBP1L1C9JCN9 74 aa11.56□□□□□ -0.56
HLA-A-208ENST00000496081 IGLC3P0DOY3 106 aa11.56□□□□□ -0.56
HLA-A-208ENST00000496081 DAZ4Q86SG3 579 aaKnown RBP11.56□□□□□ -0.56
HLA-A-208ENST00000496081 DAZ3Q9NR90 486 aaKnown RBP11.56□□□□□ -0.56
HLA-A-208ENST00000496081 PRSS29PA6NIE9 313 aa11.55□□□□□ -0.56
HLA-A-208ENST00000496081 DPM2O94777 84 aa11.55□□□□□ -0.56
HLA-A-208ENST00000496081 IGKCP01834 107 aa11.55□□□□□ -0.56
HLA-A-208ENST00000496081 MIEN1Q9BRT3 115 aa11.55□□□□□ -0.56
HLA-A-208ENST00000496081 CELA1Q9UNI1 258 aa11.55□□□□□ -0.56
HLA-A-208ENST00000496081 HHLA3Q9XRX5 114 aa11.55□□□□□ -0.56
HLA-A-208ENST00000496081 STPG4Q8N801 248 aa11.54□□□□□ -0.56
HLA-A-208ENST00000496081 C14orf144Q96I85 54 aa11.54□□□□□ -0.56
HLA-A-208ENST00000496081 PRADC1Q9BSG0 188 aa11.54□□□□□ -0.56
HLA-A-208ENST00000496081 RETNQ9HD89 108 aa11.54□□□□□ -0.56
HLA-A-208ENST00000496081 CHTOPQ9Y3Y2 248 aaKnown RBP11.54□□□□□ -0.56
HLA-A-208ENST00000496081 F8VRH5 84 aa11.54□□□□□ -0.56
HLA-A-208ENST00000496081 ZC2HC1BQ5TFG8 222 aa11.54□□□□□ -0.56
HLA-A-208ENST00000496081 OPRPNQ99935 248 aaPredicted RBP11.54□□□□□ -0.56
HLA-A-208ENST00000496081 NBEAL1Q6ZS30 2694 aa11.53□□□□□ -0.56
HLA-A-208ENST00000496081 PMVKQ15126 192 aa11.53□□□□□ -0.56
HLA-A-208ENST00000496081 ANKRD39Q53RE8 183 aa11.53□□□□□ -0.56
HLA-A-208ENST00000496081 NTM-AS1Q6ZSK4 140 aa11.53□□□□□ -0.56
HLA-A-208ENST00000496081 PYGO1Q9Y3Y4 419 aa11.53□□□□□ -0.56
HLA-A-208ENST00000496081 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.52□□□□□ -0.57
HLA-A-208ENST00000496081 IGKV2-29A2NJV5 120 aaPredicted RBP11.52□□□□□ -0.57
HLA-A-208ENST00000496081 SPART-AS1P0CW21 52 aa11.52□□□□□ -0.57
HLA-A-208ENST00000496081 CRYBA4P53673 196 aa11.52□□□□□ -0.57
HLA-A-208ENST00000496081 DAD1P61803 113 aa11.52□□□□□ -0.57
HLA-A-208ENST00000496081 CST9LQ9H4G1 147 aa11.52□□□□□ -0.57
HLA-A-208ENST00000496081 PRB2P02812 416 aaPredicted RBP11.51□□□□□ -0.57
HLA-A-208ENST00000496081 LINC00694P0DN24 101 aa11.51□□□□□ -0.57
HLA-A-208ENST00000496081 PLNP26678 52 aa11.51□□□□□ -0.57
HLA-A-208ENST00000496081 FAM104AQ969W3 186 aa11.51□□□□□ -0.57
HLA-A-208ENST00000496081 UQCR10Q9UDW1 63 aa11.51□□□□□ -0.57
HLA-A-208ENST00000496081 PRO0255Q9UI72 69 aa11.51□□□□□ -0.57
HLA-A-208ENST00000496081 IGLV4-3A0A075B6K6 122 aa11.51□□□□□ -0.57
HLA-A-208ENST00000496081 CEMP1Q6PRD7 247 aaPredicted RBP11.51□□□□□ -0.57
HLA-A-208ENST00000496081 UBE2D4Q9Y2X8 147 aa11.51□□□□□ -0.57
HLA-A-208ENST00000496081 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
HLA-A-208ENST00000496081 MGAM2Q2M2H8 2515 aa11.49□□□□□ -0.57
HLA-A-208ENST00000496081 TCTAP57738 103 aa11.49□□□□□ -0.57
HLA-A-208ENST00000496081 IGLV4-69A0A075B6H9 119 aa11.49□□□□□ -0.57
HLA-A-208ENST00000496081 ATP5G1P05496 136 aa11.49□□□□□ -0.57
HLA-A-208ENST00000496081 GYPEP15421 78 aa11.49□□□□□ -0.57
HLA-A-208ENST00000496081 KPRPQ5T749 579 aaPredicted RBP11.49□□□□□ -0.57
HLA-A-208ENST00000496081 SPANXA1Q9NS26 97 aa11.49□□□□□ -0.57
HLA-A-208ENST00000496081 K7EIL1 84 aa11.48□□□□□ -0.57
HLA-A-208ENST00000496081 NPSP0C0P6 89 aa11.48□□□□□ -0.57
HLA-A-208ENST00000496081 LBHQ53QV2 105 aaPredicted RBP11.48□□□□□ -0.57
HLA-A-208ENST00000496081 VCX2Q9H322 139 aa11.48□□□□□ -0.57
HLA-A-208ENST00000496081 TP73-AS1Q9UF72 201 aa11.48□□□□□ -0.57
HLA-A-208ENST00000496081 PAPPA-AS1Q5QFB9 102 aa11.47□□□□□ -0.57
HLA-A-208ENST00000496081 MRPL52Q86TS9 123 aaKnown RBP11.47□□□□□ -0.57
HLA-A-208ENST00000496081 SBSPONQ8IVN8 264 aa11.47□□□□□ -0.57
HLA-A-208ENST00000496081 TEX48A0A1B0GUV7 120 aa11.46□□□□□ -0.57
HLA-A-208ENST00000496081 PAX4O43316 350 aa11.46□□□□□ -0.57
HLA-A-208ENST00000496081 COX8AP10176 69 aa11.46□□□□□ -0.57
HLA-A-208ENST00000496081 VSIG2Q96IQ7 327 aa11.46□□□□□ -0.57
HLA-A-208ENST00000496081 AMELXQ99217 191 aa11.46□□□□□ -0.57
HLA-A-208ENST00000496081 C11orf86A6NJI1 115 aa11.46□□□□□ -0.58
HLA-A-208ENST00000496081 SLC25A34Q6PIV7 304 aa11.46□□□□□ -0.58
HLA-A-208ENST00000496081 TIMM21Q9BVV7 248 aa11.46□□□□□ -0.58
HLA-A-208ENST00000496081 IGKV2D-26A0A0A0MRZ7 120 aa11.45□□□□□ -0.58
HLA-A-208ENST00000496081 F5H768 121 aa11.44□□□□□ -0.58
HLA-A-208ENST00000496081 FGF6P10767 208 aa11.44□□□□□ -0.58
HLA-A-208ENST00000496081 HNRNPA3P51991 378 aaKnown RBP11.44□□□□□ -0.58
HLA-A-208ENST00000496081 C12orf74Q32Q52 190 aa11.44□□□□□ -0.58
HLA-A-208ENST00000496081 RNASE13Q5GAN3 156 aaKnown RBP11.44□□□□□ -0.58
HLA-A-208ENST00000496081 Q6ZUT4 128 aa11.44□□□□□ -0.58
HLA-A-208ENST00000496081 ATP6V0E2Q8NHE4 81 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms