RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 K7EP13 123 aa10.02□□□□□ -0.81
HDAC9-226ENST00000496026 FCER1GP30273 86 aa10.02□□□□□ -0.81
HDAC9-226ENST00000496026 PKIAP61925 76 aa10.02□□□□□ -0.81
HDAC9-226ENST00000496026 GAGE6Q13070 117 aa10.02□□□□□ -0.81
HDAC9-226ENST00000496026 KIAA1644Q3SXP7 199 aa10.02□□□□□ -0.81
HDAC9-226ENST00000496026 C10orf126Q8N4M7 172 aa10.02□□□□□ -0.81
HDAC9-226ENST00000496026 KIR2DL4Q99706 377 aa10.02□□□□□ -0.81
HDAC9-226ENST00000496026 MRPL18Q9H0U6 180 aaKnown RBP10.02□□□□□ -0.81
HDAC9-226ENST00000496026 LAMTOR2Q9Y2Q5 125 aa10.02□□□□□ -0.81
HDAC9-226ENST00000496026 UBE2L6O14933 153 aa10.01□□□□□ -0.81
HDAC9-226ENST00000496026 TSHBP01222 138 aa10.01□□□□□ -0.81
HDAC9-226ENST00000496026 FABP9Q0Z7S8 132 aa10.01□□□□□ -0.81
HDAC9-226ENST00000496026 Q8N3U1 123 aa10.01□□□□□ -0.81
HDAC9-226ENST00000496026 KRTAP1-5Q9BYS1 174 aa10.01□□□□□ -0.81
HDAC9-226ENST00000496026 MAP1LC3AQ9H492 121 aa10.01□□□□□ -0.81
HDAC9-226ENST00000496026 DNAH1Q9P2D7 4330 aa10.01□□□□□ -0.81
HDAC9-226ENST00000496026 RPL32P62910 135 aaKnown RBP10□□□□□ -0.81
HDAC9-226ENST00000496026 C1orf134Q5TEV5 83 aa10□□□□□ -0.81
HDAC9-226ENST00000496026 YPEL4Q96NS1 127 aa10□□□□□ -0.81
HDAC9-226ENST00000496026 CHCHD7Q9BUK0 85 aa10□□□□□ -0.81
HDAC9-226ENST00000496026 SMIM2Q9BVW6 85 aa10□□□□□ -0.81
HDAC9-226ENST00000496026 TRAPPC1Q9Y5R8 145 aa10□□□□□ -0.81
HDAC9-226ENST00000496026 LOC389332A0A1B0GUA5 103 aa9.99□□□□□ -0.81
HDAC9-226ENST00000496026 VPS13DQ5THJ4 4388 aa9.99□□□□□ -0.81
HDAC9-226ENST00000496026 TCAPO15273 167 aa9.98□□□□□ -0.81
HDAC9-226ENST00000496026 MPV17L2Q567V2 206 aa9.98□□□□□ -0.81
HDAC9-226ENST00000496026 C6orf223Q8N319 242 aa9.98□□□□□ -0.81
HDAC9-226ENST00000496026 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-226ENST00000496026 IGKV2-29A2NJV5 120 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-226ENST00000496026 IBA57-AS1B1ANH7 110 aa9.97□□□□□ -0.81
HDAC9-226ENST00000496026 ANGP03950 147 aaKnown RBP9.97□□□□□ -0.81
HDAC9-226ENST00000496026 RAB5AP20339 215 aa9.97□□□□□ -0.81
HDAC9-226ENST00000496026 RBX1P62877 108 aa9.97□□□□□ -0.81
HDAC9-226ENST00000496026 AMMECR1LQ6DCA0 310 aa9.97□□□□□ -0.81
HDAC9-226ENST00000496026 Q8N976 141 aa9.97□□□□□ -0.81
HDAC9-226ENST00000496026 KLK12Q9UKR0 248 aa9.97□□□□□ -0.81
HDAC9-226ENST00000496026 KMT2CQ8NEZ4 4911 aaKnown RBP9.96□□□□□ -0.81
HDAC9-226ENST00000496026 PRSS47A8MTI9 375 aa9.96□□□□□ -0.82
HDAC9-226ENST00000496026 BTF3P20290 206 aaKnown RBP9.96□□□□□ -0.82
HDAC9-226ENST00000496026 ALKBH7Q9BT30 221 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-226ENST00000496026 H7C423 109 aa9.95□□□□□ -0.82
HDAC9-226ENST00000496026 ATP6V1G1O75348 118 aa9.95□□□□□ -0.82
HDAC9-226ENST00000496026 SCO1O75880 301 aa9.95□□□□□ -0.82
HDAC9-226ENST00000496026 ESDP10768 282 aa9.95□□□□□ -0.82
HDAC9-226ENST00000496026 S100A1P23297 94 aa9.95□□□□□ -0.82
HDAC9-226ENST00000496026 RNASEKQ6P5S7 137 aaKnown RBP9.95□□□□□ -0.82
HDAC9-226ENST00000496026 NFE4Q86UQ8 179 aa9.95□□□□□ -0.82
HDAC9-226ENST00000496026 Q8N8P6 123 aa9.95□□□□□ -0.82
HDAC9-226ENST00000496026 LYSTQ99698 3801 aa9.95□□□□□ -0.82
HDAC9-226ENST00000496026 Q9HAA7 133 aa9.95□□□□□ -0.82
HDAC9-226ENST00000496026 FGF6P10767 208 aa9.94□□□□□ -0.82
HDAC9-226ENST00000496026 LAGE3Q14657 143 aa9.94□□□□□ -0.82
HDAC9-226ENST00000496026 PRSS3P2Q8NHM4 247 aa9.94□□□□□ -0.82
HDAC9-226ENST00000496026 NXT2Q9NPJ8 142 aaKnown RBP9.94□□□□□ -0.82
HDAC9-226ENST00000496026 SACSQ9NZJ4 4579 aa9.94□□□□□ -0.82
HDAC9-226ENST00000496026 IGLV4-60A0A075B6I1 120 aa9.93□□□□□ -0.82
HDAC9-226ENST00000496026 TRAV8-3A0A0A6YYJ7 113 aa9.93□□□□□ -0.82
HDAC9-226ENST00000496026 A0A1B0GUV1 79 aa9.93□□□□□ -0.82
HDAC9-226ENST00000496026 CRPP02741 224 aa9.93□□□□□ -0.82
HDAC9-226ENST00000496026 IFI27P40305 119 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-226ENST00000496026 UBE2WQ96B02 151 aa9.93□□□□□ -0.82
HDAC9-226ENST00000496026 TMEM18Q96B42 140 aa9.93□□□□□ -0.82
HDAC9-226ENST00000496026 TMEM101Q96IK0 257 aa9.93□□□□□ -0.82
HDAC9-226ENST00000496026 RTL8CO15255 209 aa9.92□□□□□ -0.82
HDAC9-226ENST00000496026 ZNF25P17030 456 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-226ENST00000496026 SMAGPQ0VAQ4 97 aa9.92□□□□□ -0.82
HDAC9-226ENST00000496026 LINC00269Q8N2A0 174 aa9.92□□□□□ -0.82
HDAC9-226ENST00000496026 C20orf203Q8NBC4 194 aa9.92□□□□□ -0.82
HDAC9-226ENST00000496026 COLCA2A8K830 154 aa9.91□□□□□ -0.82
HDAC9-226ENST00000496026 Q0VG73 95 aa9.91□□□□□ -0.82
HDAC9-226ENST00000496026 CLPSL2Q6UWE3 100 aa9.91□□□□□ -0.82
HDAC9-226ENST00000496026 MRPL52Q86TS9 123 aaKnown RBP9.91□□□□□ -0.82
HDAC9-226ENST00000496026 OR5A1Q8NGJ0 315 aa9.91□□□□□ -0.82
HDAC9-226ENST00000496026 K7EMI3 77 aa9.9□□□□□ -0.82
HDAC9-226ENST00000496026 ORMDL2Q53FV1 153 aa9.9□□□□□ -0.82
HDAC9-226ENST00000496026 DGAT2L7PQ6IED9 249 aa9.9□□□□□ -0.82
HDAC9-226ENST00000496026 LINC00336Q6ZUF6 198 aa9.9□□□□□ -0.82
HDAC9-226ENST00000496026 RMI2Q96E14 147 aa9.9□□□□□ -0.82
HDAC9-226ENST00000496026 PSCAO43653 123 aa9.89□□□□□ -0.83
HDAC9-226ENST00000496026 TRGC2P03986 189 aa9.89□□□□□ -0.83
HDAC9-226ENST00000496026 RPL39P62891 51 aaKnown RBP9.89□□□□□ -0.83
HDAC9-226ENST00000496026 REG3AQ06141 175 aa9.89□□□□□ -0.83
HDAC9-226ENST00000496026 ENHOQ6UWT2 76 aa9.89□□□□□ -0.83
HDAC9-226ENST00000496026 FA2HQ7L5A8 372 aa9.89□□□□□ -0.83
HDAC9-226ENST00000496026 TM2D2Q9BX73 214 aa9.89□□□□□ -0.83
HDAC9-226ENST00000496026 RYR2Q92736 4967 aa9.89□□□□□ -0.83
HDAC9-226ENST00000496026 HYDINQ4G0P3 5121 aa9.88□□□□□ -0.83
HDAC9-226ENST00000496026 IGKV2D-24A0A075B6R9 120 aa9.88□□□□□ -0.83
HDAC9-226ENST00000496026 PRSS29PA6NIE9 313 aa9.88□□□□□ -0.83
HDAC9-226ENST00000496026 Q6ZRN7 208 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-226ENST00000496026 C18orf32Q8TCD1 76 aa9.88□□□□□ -0.83
HDAC9-226ENST00000496026 PRR34Q9NV39 138 aa9.88□□□□□ -0.83
HDAC9-226ENST00000496026 UBE2D4Q9Y2X8 147 aa9.88□□□□□ -0.83
HDAC9-226ENST00000496026 IGKV3OR2-268A0A0C4DH90 116 aa9.87□□□□□ -0.83
HDAC9-226ENST00000496026 MIAQ16674 131 aa9.87□□□□□ -0.83
HDAC9-226ENST00000496026 TIMM21Q9BVV7 248 aa9.87□□□□□ -0.83
HDAC9-226ENST00000496026 C1orf43Q9BWL3 253 aa9.87□□□□□ -0.83
HDAC9-226ENST00000496026 SPANXA1Q9NS26 97 aa9.87□□□□□ -0.83
HDAC9-226ENST00000496026 CYSLTR1Q9Y271 337 aa9.87□□□□□ -0.83
HDAC9-226ENST00000496026 CSDC2Q9Y534 153 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms