RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 CACNG7P62955 275 aa7.57□□□□□ -1.2
SHROOM1-206ENST00000495680 PRSS3P2Q8NHM4 247 aa7.57□□□□□ -1.2
SHROOM1-206ENST00000495680 PGLYRP4Q96LB8 373 aa7.57□□□□□ -1.2
SHROOM1-206ENST00000495680 NIT2Q9NQR4 276 aa7.57□□□□□ -1.2
SHROOM1-206ENST00000495680 TRBV20OR9-2A0A075B6H5 130 aa7.56□□□□□ -1.2
SHROOM1-206ENST00000495680 IGKV2-24A0A0C4DH68 120 aa7.56□□□□□ -1.2
SHROOM1-206ENST00000495680 BCL2L11O43521 198 aa7.56□□□□□ -1.2
SHROOM1-206ENST00000495680 AMTP48728 403 aa7.56□□□□□ -1.2
SHROOM1-206ENST00000495680 RPS20P60866 119 aaKnown RBP7.56□□□□□ -1.2
SHROOM1-206ENST00000495680 LYZL1Q6UWQ5 148 aa7.56□□□□□ -1.2
SHROOM1-206ENST00000495680 BATF3Q9NR55 127 aa7.56□□□□□ -1.2
SHROOM1-206ENST00000495680 TRAV26-2A0A0B4J265 109 aa7.55□□□□□ -1.2
SHROOM1-206ENST00000495680 UBE2L6O14933 153 aa7.55□□□□□ -1.2
SHROOM1-206ENST00000495680 NTF3P20783 257 aa7.55□□□□□ -1.2
SHROOM1-206ENST00000495680 PRR3P79522 188 aaKnown RBP7.55□□□□□ -1.2
SHROOM1-206ENST00000495680 MAJINQ3KP22 176 aa7.55□□□□□ -1.2
SHROOM1-206ENST00000495680 WDR73Q6P4I2 378 aa7.55□□□□□ -1.2
SHROOM1-206ENST00000495680 Q6ZNX1 250 aa7.55□□□□□ -1.2
SHROOM1-206ENST00000495680 DPH3P1Q9H4G8 78 aa7.55□□□□□ -1.2
SHROOM1-206ENST00000495680 KANTRA0A1W2PQU2 76 aa7.54□□□□□ -1.2
SHROOM1-206ENST00000495680 RPS10P46783 165 aaKnown RBP7.54□□□□□ -1.2
SHROOM1-206ENST00000495680 COTL1Q14019 142 aa7.54□□□□□ -1.2
SHROOM1-206ENST00000495680 RGS21Q2M5E4 152 aa7.54□□□□□ -1.2
SHROOM1-206ENST00000495680 GATD1Q8NB37 220 aa7.54□□□□□ -1.2
SHROOM1-206ENST00000495680 LYPD6BQ8NI32 183 aa7.54□□□□□ -1.2
SHROOM1-206ENST00000495680 GTSF1Q8WW33 167 aa7.54□□□□□ -1.2
SHROOM1-206ENST00000495680 LINC01600Q96MT4 127 aa7.54□□□□□ -1.2
SHROOM1-206ENST00000495680 MANBALQ9NQG1 85 aa7.54□□□□□ -1.2
SHROOM1-206ENST00000495680 A0A096LNI7 61 aa7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 HMSDA8MTL9 139 aa7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 F2Z2F3 143 aa7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 NDUFS6O75380 124 aaKnown RBP7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 IFNA1P01562 189 aa7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 TRGC1P0CF51 173 aa7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 CTRLP40313 264 aa7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 GNG4P50150 75 aa7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 STPG4Q8N801 248 aa7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 C7orf33Q8WU49 177 aa7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 CHCHD10Q8WYQ3 142 aaPredicted RBP7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 RPL39LQ96EH5 51 aaKnown RBP7.53□□□□□ -1.2
SHROOM1-206ENST00000495680 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.52□□□□□ -1.21
SHROOM1-206ENST00000495680 GVQW2A0A096LPI5 108 aaPredicted RBP7.52□□□□□ -1.21
SHROOM1-206ENST00000495680 TRAV1-1A0A0B4J248 108 aa7.52□□□□□ -1.21
SHROOM1-206ENST00000495680 IGKV2-29A2NJV5 120 aaPredicted RBP7.52□□□□□ -1.21
SHROOM1-206ENST00000495680 FOXA3P55318 350 aaPredicted RBP7.52□□□□□ -1.21
SHROOM1-206ENST00000495680 TWIST1Q15672 202 aa7.52□□□□□ -1.21
SHROOM1-206ENST00000495680 CFAP161Q6P656 301 aa7.52□□□□□ -1.21
SHROOM1-206ENST00000495680 C9orf62Q8N4C0 152 aa7.52□□□□□ -1.21
SHROOM1-206ENST00000495680 LINC00526Q96FQ7 95 aa7.52□□□□□ -1.21
SHROOM1-206ENST00000495680 FOXI1Q12951 378 aa7.51□□□□□ -1.21
SHROOM1-206ENST00000495680 NUDT10Q8NFP7 164 aa7.51□□□□□ -1.21
SHROOM1-206ENST00000495680 NUDT11Q96G61 164 aa7.51□□□□□ -1.21
SHROOM1-206ENST00000495680 CNFNQ9BYD5 112 aa7.51□□□□□ -1.21
SHROOM1-206ENST00000495680 MED9Q9NWA0 146 aa7.51□□□□□ -1.21
SHROOM1-206ENST00000495680 XKRY2A2RUG3 117 aa7.5□□□□□ -1.21
SHROOM1-206ENST00000495680 MEF2BQ02080 365 aaPredicted RBP7.5□□□□□ -1.21
SHROOM1-206ENST00000495680 RNASEKQ6P5S7 137 aaKnown RBP7.5□□□□□ -1.21
SHROOM1-206ENST00000495680 SMIM12Q96EX1 92 aa7.5□□□□□ -1.21
SHROOM1-206ENST00000495680 RNASE7Q9H1E1 156 aaKnown RBP7.5□□□□□ -1.21
SHROOM1-206ENST00000495680 A0A0J9YXV3 536 aa7.49□□□□□ -1.21
SHROOM1-206ENST00000495680 K7EN84 100 aa7.49□□□□□ -1.21
SHROOM1-206ENST00000495680 GAS8-AS1O95177 125 aa7.49□□□□□ -1.21
SHROOM1-206ENST00000495680 FGF6P10767 208 aa7.49□□□□□ -1.21
SHROOM1-206ENST00000495680 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
SHROOM1-206ENST00000495680 AMMECR1LQ6DCA0 310 aa7.49□□□□□ -1.21
SHROOM1-206ENST00000495680 FAM231BA6NCW3 169 aa7.48□□□□□ -1.21
SHROOM1-206ENST00000495680 XCL1P47992 114 aa7.48□□□□□ -1.21
SHROOM1-206ENST00000495680 EIF5AP63241 154 aaKnown RBP7.48□□□□□ -1.21
SHROOM1-206ENST00000495680 RPP21Q9H633 154 aaKnown RBP7.48□□□□□ -1.21
SHROOM1-206ENST00000495680 SDHAF1A6NFY7 115 aa7.47□□□□□ -1.21
SHROOM1-206ENST00000495680 PDE6DO43924 150 aa7.47□□□□□ -1.21
SHROOM1-206ENST00000495680 NCR2O95944 276 aa7.47□□□□□ -1.21
SHROOM1-206ENST00000495680 APCSP02743 223 aa7.47□□□□□ -1.21
SHROOM1-206ENST00000495680 BCL2P10415 239 aa7.47□□□□□ -1.21
SHROOM1-206ENST00000495680 OCC1Q8TAD7 63 aa7.47□□□□□ -1.21
SHROOM1-206ENST00000495680 CCL25O15444 150 aa7.46□□□□□ -1.22
SHROOM1-206ENST00000495680 SRSF9Q13242 221 aaKnown RBP eCLIP7.46□□□□□ -1.22
SHROOM1-206ENST00000495680 OR5A1Q8NGJ0 315 aa7.46□□□□□ -1.22
SHROOM1-206ENST00000495680 LINC00959A0A1B0GUT2 108 aa7.45□□□□□ -1.22
SHROOM1-206ENST00000495680 H7C423 109 aa7.45□□□□□ -1.22
SHROOM1-206ENST00000495680 SPINK6Q6UWN8 80 aa7.45□□□□□ -1.22
SHROOM1-206ENST00000495680 CARD19Q96LW7 228 aa7.45□□□□□ -1.22
SHROOM1-206ENST00000495680 BIN3Q9NQY0 253 aa7.45□□□□□ -1.22
SHROOM1-206ENST00000495680 LPAP08519 4548 aa7.45□□□□□ -1.22
SHROOM1-206ENST00000495680 IGHV1-58A0A0C4DH39 117 aa7.44□□□□□ -1.22
SHROOM1-206ENST00000495680 TEX46H3BTG2 121 aa7.44□□□□□ -1.22
SHROOM1-206ENST00000495680 TSHBP01222 138 aa7.44□□□□□ -1.22
SHROOM1-206ENST00000495680 ESDP10768 282 aa7.44□□□□□ -1.22
SHROOM1-206ENST00000495680 TMEM242Q9NWH2 141 aa7.44□□□□□ -1.22
SHROOM1-206ENST00000495680 I3L3M4 83 aa7.43□□□□□ -1.22
SHROOM1-206ENST00000495680 ZNF25P17030 456 aaPredicted RBP7.43□□□□□ -1.22
SHROOM1-206ENST00000495680 PMCHP20382 165 aa7.43□□□□□ -1.22
SHROOM1-206ENST00000495680 TRBV6-5A0A0K0K1A5 114 aa7.42□□□□□ -1.22
SHROOM1-206ENST00000495680 A0A1W2PNN7 141 aa7.42□□□□□ -1.22
SHROOM1-206ENST00000495680 PTTG1IPP53801 180 aa7.42□□□□□ -1.22
SHROOM1-206ENST00000495680 SYCNQ0VAF6 134 aa7.42□□□□□ -1.22
SHROOM1-206ENST00000495680 EIF5AL1Q6IS14 154 aaKnown RBP7.42□□□□□ -1.22
SHROOM1-206ENST00000495680 REG3GQ6UW15 175 aa7.42□□□□□ -1.22
SHROOM1-206ENST00000495680 Q6ZRP5 223 aa7.42□□□□□ -1.22
SHROOM1-206ENST00000495680 BTF3L4Q96K17 158 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms