RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 PROK1P58294 105 aa11.18□□□□□ -0.62
CALD1-222ENST00000495522 TNFRSF18Q9Y5U5 241 aa11.18□□□□□ -0.62
CALD1-222ENST00000495522 FASNP49327 2511 aaKnown RBP11.18□□□□□ -0.62
CALD1-222ENST00000495522 FHL3Q13643 280 aa11.18□□□□□ -0.62
CALD1-222ENST00000495522 C11orf72Q8NBR9 251 aa11.18□□□□□ -0.62
CALD1-222ENST00000495522 SPXQ9BT56 116 aa11.18□□□□□ -0.62
CALD1-222ENST00000495522 IGLV4-3A0A075B6K6 122 aa11.17□□□□□ -0.62
CALD1-222ENST00000495522 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.624e-6■■■■□ 19.6
CALD1-222ENST00000495522 CFAP126Q5VTH2 177 aa11.17□□□□□ -0.62
CALD1-222ENST00000495522 SHISA2Q6UWI4 295 aa11.17□□□□□ -0.62
CALD1-222ENST00000495522 ESM1Q9NQ30 184 aa11.17□□□□□ -0.62
CALD1-222ENST00000495522 A0A1W2PRX2 142 aa11.17□□□□□ -0.62
CALD1-222ENST00000495522 F8W1H4 67 aa11.17□□□□□ -0.62
CALD1-222ENST00000495522 RHODO00212 210 aa11.17□□□□□ -0.62
CALD1-222ENST00000495522 TSPEAR-AS2P59090 65 aa11.17□□□□□ -0.62
CALD1-222ENST00000495522 VCX2Q9H322 139 aa11.17□□□□□ -0.62
CALD1-222ENST00000495522 TLN2Q9Y4G6 2542 aa11.16□□□□□ -0.62
CALD1-222ENST00000495522 RRN3P1Q2M238 152 aa11.16□□□□□ -0.62
CALD1-222ENST00000495522 ODF3L2Q3SX64 289 aa11.16□□□□□ -0.62
CALD1-222ENST00000495522 C11orf44Q8N8P7 122 aa11.16□□□□□ -0.62
CALD1-222ENST00000495522 PYGO1Q9Y3Y4 419 aa11.16□□□□□ -0.62
CALD1-222ENST00000495522 A0A0J9YY99 117 aa11.16□□□□□ -0.62
CALD1-222ENST00000495522 J3QQQ9 107 aa11.16□□□□□ -0.62
CALD1-222ENST00000495522 CCL24O00175 119 aa11.16□□□□□ -0.62
CALD1-222ENST00000495522 CD28P10747 220 aa11.16□□□□□ -0.62
CALD1-222ENST00000495522 SPANXB1Q9NS25 103 aaPredicted RBP11.16□□□□□ -0.62
CALD1-222ENST00000495522 BEAN1Q3B7T3 259 aa11.15□□□□□ -0.62
CALD1-222ENST00000495522 STHQ8IWL8 128 aa11.15□□□□□ -0.62
CALD1-222ENST00000495522 TMEM223A0PJW6 202 aa11.14□□□□□ -0.63
CALD1-222ENST00000495522 LGALS3P17931 250 aaKnown RBP11.14□□□□□ -0.63
CALD1-222ENST00000495522 Q6ZSN1 163 aa11.14□□□□□ -0.63
CALD1-222ENST00000495522 LEPROTO15243 131 aa11.14□□□□□ -0.63
CALD1-222ENST00000495522 XCL2Q9UBD3 114 aa11.14□□□□□ -0.63
CALD1-222ENST00000495522 ERG28Q9UKR5 140 aa11.14□□□□□ -0.63
CALD1-222ENST00000495522 NACAE9PAV3 2078 aa11.13□□□□□ -0.63
CALD1-222ENST00000495522 IGHV3-53P01767 116 aa11.13□□□□□ -0.63
CALD1-222ENST00000495522 ZNF22P17026 224 aaPredicted RBP11.13□□□□□ -0.63
CALD1-222ENST00000495522 AMELXQ99217 191 aa11.13□□□□□ -0.63
CALD1-222ENST00000495522 A0A0J9YXV3 536 aa11.13□□□□□ -0.63
CALD1-222ENST00000495522 RS1O15537 224 aa11.13□□□□□ -0.63
CALD1-222ENST00000495522 UBE2D1P51668 147 aa11.13□□□□□ -0.63
CALD1-222ENST00000495522 DNAJC30Q96LL9 226 aa11.13□□□□□ -0.63
CALD1-222ENST00000495522 PDZD2O15018 2839 aa11.12□□□□□ -0.63
CALD1-222ENST00000495522 KRTAP1-1Q07627 177 aa11.12□□□□□ -0.63
CALD1-222ENST00000495522 SLC25A29Q8N8R3 303 aa11.12□□□□□ -0.63
CALD1-222ENST00000495522 Q9UF83 564 aa11.12□□□□□ -0.63
CALD1-222ENST00000495522 SONP18583 2426 aaKnown RBP11.12□□□□□ -0.63
CALD1-222ENST00000495522 CITED2Q99967 270 aaPredicted RBP11.11□□□□□ -0.63
CALD1-222ENST00000495522 FLNAP21333 2647 aaKnown RBP11.11□□□□□ -0.63
CALD1-222ENST00000495522 UNC79Q9P2D8 2635 aa11.11□□□□□ -0.63
CALD1-222ENST00000495522 GAGE5Q13069 117 aa11.11□□□□□ -0.63
CALD1-222ENST00000495522 GAGE6Q13070 117 aa11.11□□□□□ -0.63
CALD1-222ENST00000495522 FAM104AQ969W3 186 aa11.11□□□□□ -0.63
CALD1-222ENST00000495522 YAE1D1Q9NRH1 226 aa11.11□□□□□ -0.63
CALD1-222ENST00000495522 ITPR2Q14571 2701 aa11.11□□□□□ -0.63
CALD1-222ENST00000495522 HECTD1Q9ULT8 2610 aa11.1□□□□□ -0.63
CALD1-222ENST00000495522 CHCHD7Q9BUK0 85 aa11.1□□□□□ -0.63
CALD1-222ENST00000495522 SPANXA1Q9NS26 97 aa11.1□□□□□ -0.63
CALD1-222ENST00000495522 IGHV3-30P01768 117 aa11.1□□□□□ -0.63
CALD1-222ENST00000495522 RNASE1P07998 156 aaKnown RBP11.1□□□□□ -0.63
CALD1-222ENST00000495522 IGHV3-30-5P0DP03 117 aa11.1□□□□□ -0.63
CALD1-222ENST00000495522 C1orf158Q8N1D5 194 aa11.1□□□□□ -0.63
CALD1-222ENST00000495522 LINC01006Q8NI28 216 aa11.1□□□□□ -0.63
CALD1-222ENST00000495522 C16orf95Q9H693 158 aa11.1□□□□□ -0.63
CALD1-222ENST00000495522 MRPS36P82909 103 aaKnown RBP11.09□□□□□ -0.63
CALD1-222ENST00000495522 CEMP1Q6PRD7 247 aaPredicted RBP11.09□□□□□ -0.63
CALD1-222ENST00000495522 IGHV3OR16-12A0A075B7B8 117 aa11.09□□□□□ -0.63
CALD1-222ENST00000495522 IL17DQ8TAD2 202 aa11.09□□□□□ -0.63
CALD1-222ENST00000495522 SS18L2Q9UHA2 77 aa11.09□□□□□ -0.63
CALD1-222ENST00000495522 NF1P21359 2839 aa11.08□□□□□ -0.64
CALD1-222ENST00000495522 UBE2D4Q9Y2X8 147 aa11.08□□□□□ -0.64
CALD1-222ENST00000495522 IGHV3-64A0A075B6Q5 118 aa11.07□□□□□ -0.64
CALD1-222ENST00000495522 H3BMG7 143 aa11.07□□□□□ -0.64
CALD1-222ENST00000495522 HERV-K104P63124 156 aa11.07□□□□□ -0.64
CALD1-222ENST00000495522 CCDC168Q8NDH2 2452 aa11.07□□□□□ -0.64
CALD1-222ENST00000495522 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.07□□□□□ -0.64
CALD1-222ENST00000495522 IGKV2-29A2NJV5 120 aaPredicted RBP11.07□□□□□ -0.64
CALD1-222ENST00000495522 APOMO95445 188 aa11.07□□□□□ -0.64
CALD1-222ENST00000495522 CMC4P56277 68 aaPredicted RBP11.07□□□□□ -0.64
CALD1-222ENST00000495522 TRGV1A0A0A0MS02 117 aa11.06□□□□□ -0.64
CALD1-222ENST00000495522 IGHV3-38A0A0C4DH36 116 aa11.06□□□□□ -0.64
CALD1-222ENST00000495522 NDUFA11Q86Y39 141 aa11.06□□□□□ -0.64
CALD1-222ENST00000495522 RNASE13Q5GAN3 156 aaKnown RBP11.06□□□□□ -0.64
CALD1-222ENST00000495522 ATP6V0E2Q8NHE4 81 aa11.06□□□□□ -0.64
CALD1-222ENST00000495522 TIMM21Q9BVV7 248 aa11.06□□□□□ -0.64
CALD1-222ENST00000495522 TINCRA0A1B0GVN0 87 aa11.05□□□□□ -0.64
CALD1-222ENST00000495522 SPINK8P0C7L1 97 aa11.05□□□□□ -0.64
CALD1-222ENST00000495522 RNF183Q96D59 192 aa11.05□□□□□ -0.64
CALD1-222ENST00000495522 IGHV3-30-3P0DP02 117 aa11.04□□□□□ -0.64
CALD1-222ENST00000495522 TMEM263Q8WUH6 116 aaKnown RBP11.04□□□□□ -0.64
CALD1-222ENST00000495522 CFC1BP0CG36 223 aa11.04□□□□□ -0.64
CALD1-222ENST00000495522 CFC1P0CG37 223 aa11.04□□□□□ -0.64
CALD1-222ENST00000495522 GAGE13Q4V321 117 aa11.04□□□□□ -0.64
CALD1-222ENST00000495522 Q6ZUT4 128 aa11.04□□□□□ -0.64
CALD1-222ENST00000495522 WNK1Q9H4A3 2382 aa11.04□□□□□ -0.64
CALD1-222ENST00000495522 WFDC2Q14508 124 aa11.03□□□□□ -0.64
CALD1-222ENST00000495522 C10orf126Q8N4M7 172 aa11.03□□□□□ -0.64
CALD1-222ENST00000495522 IGHV1-58A0A0C4DH39 117 aa11.02□□□□□ -0.65
CALD1-222ENST00000495522 LYRM7Q5U5X0 104 aa11.02□□□□□ -0.65
CALD1-222ENST00000495522 CUBNO60494 3623 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms