RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-231ENST00000494973 AMTP48728 403 aa9.4□□□□□ -0.9
APTX-231ENST00000494973 LELP1Q5T871 98 aa9.4□□□□□ -0.9
APTX-231ENST00000494973 IGLV2-18A0A075B6J9 118 aa9.39□□□□□ -0.91
APTX-231ENST00000494973 TRBV6-8A0A0A6YYG3 113 aa9.39□□□□□ -0.91
APTX-231ENST00000494973 TRAV8-6A0A0B4J262 113 aa9.39□□□□□ -0.91
APTX-231ENST00000494973 IGHV3-38A0A0C4DH36 116 aa9.39□□□□□ -0.91
APTX-231ENST00000494973 LINC01546A6NGU7 62 aa9.39□□□□□ -0.91
APTX-231ENST00000494973 H7C423 109 aa9.39□□□□□ -0.91
APTX-231ENST00000494973 LINC00614P0C842 121 aa9.39□□□□□ -0.91
APTX-231ENST00000494973 IFI27P40305 119 aaPredicted RBP9.39□□□□□ -0.91
APTX-231ENST00000494973 LAGE3Q14657 143 aa9.39□□□□□ -0.91
APTX-231ENST00000494973 IQCJQ1A5X6 159 aa9.39□□□□□ -0.91
APTX-231ENST00000494973 Q9UF83 564 aa9.39□□□□□ -0.91
APTX-231ENST00000494973 UBE2L6O14933 153 aa9.38□□□□□ -0.91
APTX-231ENST00000494973 TSHBP01222 138 aa9.38□□□□□ -0.91
APTX-231ENST00000494973 ZFAND6Q6FIF0 208 aa9.38□□□□□ -0.91
APTX-231ENST00000494973 RNASEKQ6P5S7 137 aaKnown RBP9.38□□□□□ -0.91
APTX-231ENST00000494973 LYPD5Q6UWN5 251 aa9.38□□□□□ -0.91
APTX-231ENST00000494973 TMEM243Q9BU79 118 aa9.38□□□□□ -0.91
APTX-231ENST00000494973 APLNQ9ULZ1 77 aa9.38□□□□□ -0.91
APTX-231ENST00000494973 TGP01266 2768 aa9.37□□□□□ -0.91
APTX-231ENST00000494973 HSBP1O75506 76 aa9.37□□□□□ -0.91
APTX-231ENST00000494973 S100A6P06703 90 aa9.37□□□□□ -0.91
APTX-231ENST00000494973 NIT1Q86X76 327 aa9.37□□□□□ -0.91
APTX-231ENST00000494973 COA6Q5JTJ3 125 aaKnown RBP9.36□□□□□ -0.91
APTX-231ENST00000494973 UBE2DNLQ8IWF7 75 aa9.36□□□□□ -0.91
APTX-231ENST00000494973 CHCHD7Q9BUK0 85 aa9.36□□□□□ -0.91
APTX-231ENST00000494973 CYSLTR1Q9Y271 337 aa9.36□□□□□ -0.91
APTX-231ENST00000494973 MRPS16Q9Y3D3 137 aaKnown RBP9.36□□□□□ -0.91
APTX-231ENST00000494973 ZNF25P17030 456 aaPredicted RBP9.35□□□□□ -0.91
APTX-231ENST00000494973 CHCHD5Q9BSY4 110 aa9.35□□□□□ -0.91
APTX-231ENST00000494973 UPK3BQ9BT76 320 aa9.35□□□□□ -0.91
APTX-231ENST00000494973 SERF1AO75920 110 aa9.34□□□□□ -0.91
APTX-231ENST00000494973 HBDP02042 147 aa9.34□□□□□ -0.91
APTX-231ENST00000494973 NPSP0C0P6 89 aa9.34□□□□□ -0.91
APTX-231ENST00000494973 ESDP10768 282 aa9.34□□□□□ -0.91
APTX-231ENST00000494973 ESRGQ1W209 222 aa9.34□□□□□ -0.91
APTX-231ENST00000494973 CASC10Q5T4H9 136 aa9.34□□□□□ -0.91
APTX-231ENST00000494973 C20orf203Q8NBC4 194 aa9.34□□□□□ -0.91
APTX-231ENST00000494973 K7EP13 123 aa9.33□□□□□ -0.92
APTX-231ENST00000494973 BTF3P20290 206 aaKnown RBP9.33□□□□□ -0.92
APTX-231ENST00000494973 NDUFA6P56556 154 aa9.33□□□□□ -0.92
APTX-231ENST00000494973 AMMECR1LQ6DCA0 310 aa9.33□□□□□ -0.92
APTX-231ENST00000494973 NTM-AS1Q6ZSK4 140 aa9.33□□□□□ -0.92
APTX-231ENST00000494973 TMEM101Q96IK0 257 aa9.33□□□□□ -0.92
APTX-231ENST00000494973 TIMM21Q9BVV7 248 aa9.33□□□□□ -0.92
APTX-231ENST00000494973 SPANXA1Q9NS26 97 aa9.33□□□□□ -0.92
APTX-231ENST00000494973 DNAH7Q8WXX0 4024 aa9.33□□□□□ -0.92
APTX-231ENST00000494973 A0A087WX48 190 aa9.32□□□□□ -0.92
APTX-231ENST00000494973 PAPPA-AS1Q5QFB9 102 aa9.32□□□□□ -0.92
APTX-231ENST00000494973 C2orf66Q6UXQ4 117 aa9.32□□□□□ -0.92
APTX-231ENST00000494973 MRPL52Q86TS9 123 aaKnown RBP9.32□□□□□ -0.92
APTX-231ENST00000494973 PACRGQ96M98 296 aaPredicted RBP9.32□□□□□ -0.92
APTX-231ENST00000494973 DGAT2L7PQ6IED9 249 aa9.31□□□□□ -0.92
APTX-231ENST00000494973 TOMM6Q96B49 74 aa9.31□□□□□ -0.92
APTX-231ENST00000494973 URB1-AS1Q96HZ7 61 aa9.31□□□□□ -0.92
APTX-231ENST00000494973 LINC00588Q9Y4M8 146 aa9.31□□□□□ -0.92
APTX-231ENST00000494973 CSDC2Q9Y534 153 aaKnown RBP9.31□□□□□ -0.92
APTX-231ENST00000494973 A0A1B0GUV1 79 aa9.3□□□□□ -0.92
APTX-231ENST00000494973 TMEM262E9PQX1 116 aa9.3□□□□□ -0.92
APTX-231ENST00000494973 ATP5LO75964 103 aa9.3□□□□□ -0.92
APTX-231ENST00000494973 LGALS9CQ6DKI2 356 aa9.3□□□□□ -0.92
APTX-231ENST00000494973 TIMM17AQ99595 171 aa9.3□□□□□ -0.92
APTX-231ENST00000494973 PYGO1Q9Y3Y4 419 aa9.3□□□□□ -0.92
APTX-231ENST00000494973 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.29□□□□□ -0.92
APTX-231ENST00000494973 TRAV9-2A0A087WT02 112 aa9.29□□□□□ -0.92
APTX-231ENST00000494973 IGKV2-29A2NJV5 120 aaPredicted RBP9.29□□□□□ -0.92
APTX-231ENST00000494973 SIVA1O15304 175 aa9.29□□□□□ -0.92
APTX-231ENST00000494973 FGF6P10767 208 aa9.29□□□□□ -0.92
APTX-231ENST00000494973 LINC01556Q5JQF7 62 aa9.29□□□□□ -0.92
APTX-231ENST00000494973 Q6ZN92 141 aa9.29□□□□□ -0.92
APTX-231ENST00000494973 C10orf126Q8N4M7 172 aa9.29□□□□□ -0.92
APTX-231ENST00000494973 OR5A1Q8NGJ0 315 aa9.29□□□□□ -0.92
APTX-231ENST00000494973 TMEM141Q96I45 108 aa9.29□□□□□ -0.92
APTX-231ENST00000494973 HSPB8Q9UJY1 196 aa9.29□□□□□ -0.92
APTX-231ENST00000494973 DNAH10OSP0CZ25 163 aa9.28□□□□□ -0.92
APTX-231ENST00000494973 S100A2P29034 98 aa9.28□□□□□ -0.92
APTX-231ENST00000494973 LINC00310P59036 64 aa9.28□□□□□ -0.92
APTX-231ENST00000494973 GAGE6Q13070 117 aa9.28□□□□□ -0.92
APTX-231ENST00000494973 TTC32Q5I0X7 151 aa9.28□□□□□ -0.92
APTX-231ENST00000494973 ERASQ7Z444 233 aa9.28□□□□□ -0.92
APTX-231ENST00000494973 UBE2D4Q9Y2X8 147 aa9.28□□□□□ -0.92
APTX-231ENST00000494973 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.27□□□□□ -0.93
APTX-231ENST00000494973 LEPROTL1O95214 131 aa9.27□□□□□ -0.93
APTX-231ENST00000494973 MRPS36P82909 103 aaKnown RBP9.27□□□□□ -0.93
APTX-231ENST00000494973 WFDC10BQ8IUB3 73 aa9.27□□□□□ -0.93
APTX-231ENST00000494973 DEFB104AQ8WTQ1 72 aa9.27□□□□□ -0.93
APTX-231ENST00000494973 SCGB3A1Q96QR1 104 aa9.27□□□□□ -0.93
APTX-231ENST00000494973 RBX1P62877 108 aa9.26□□□□□ -0.93
APTX-231ENST00000494973 RPL39P62891 51 aaKnown RBP9.26□□□□□ -0.93
APTX-231ENST00000494973 PDZD11Q5EBL8 140 aa9.26□□□□□ -0.93
APTX-231ENST00000494973 Q9H8V8 135 aa9.26□□□□□ -0.93
APTX-231ENST00000494973 DYNC2H1Q8NCM8 4307 aaKnown RBP9.26□□□□□ -0.93
APTX-231ENST00000494973 A0A096LNJ9 63 aa9.25□□□□□ -0.93
APTX-231ENST00000494973 MPV17L2Q567V2 206 aa9.25□□□□□ -0.93
APTX-231ENST00000494973 C2orf88Q9BSF0 95 aa9.25□□□□□ -0.93
APTX-231ENST00000494973 TMA7Q9Y2S6 64 aaKnown RBP9.25□□□□□ -0.93
APTX-231ENST00000494973 STARD9Q9P2P6 4700 aa9.24□□□□□ -0.93
APTX-231ENST00000494973 IGIPA6NJ69 53 aa9.24□□□□□ -0.93
APTX-231ENST00000494973 CRPP02741 224 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms