RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 PMCHP20382 165 aa10.62□□□□□ -0.71
LIME1-209ENST00000494776 FUSP35637 526 aaKnown RBP eCLIP10.62□□□□□ -0.71
LIME1-209ENST00000494776 MRPL54Q6P161 138 aaKnown RBP10.62□□□□□ -0.71
LIME1-209ENST00000494776 DNAH11Q96DT5 4516 aa10.61□□□□□ -0.71
LIME1-209ENST00000494776 LRCOL1A6NCL2 159 aa10.61□□□□□ -0.71
LIME1-209ENST00000494776 I3L3M4 83 aa10.61□□□□□ -0.71
LIME1-209ENST00000494776 CDPF1Q6NVV7 123 aa10.61□□□□□ -0.71
LIME1-209ENST00000494776 ANAPC16Q96DE5 110 aa10.61□□□□□ -0.71
LIME1-209ENST00000494776 C1orf43Q9BWL3 253 aa10.61□□□□□ -0.71
LIME1-209ENST00000494776 TRBV6-5A0A0K0K1A5 114 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 F8W036 122 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 SMKR1H3BMG3 65 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 GAS8-AS1O95177 125 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 NCR2O95944 276 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 PPP1R17O96001 155 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 APCSP02743 223 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 HBBP68871 147 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 CLPSL2Q6UWE3 100 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 ENHOQ6UWT2 76 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 LINC00269Q8N2A0 174 aa10.6□□□□□ -0.71
LIME1-209ENST00000494776 DYNC1H1Q14204 4646 aaKnown RBP10.6□□□□□ -0.71
LIME1-209ENST00000494776 LECT2O14960 151 aa10.59□□□□□ -0.71
LIME1-209ENST00000494776 FAM104BQ5XKR9 115 aa10.59□□□□□ -0.71
LIME1-209ENST00000494776 COMMD7Q86VX2 200 aa10.59□□□□□ -0.71
LIME1-209ENST00000494776 BAALCQ8WXS3 180 aa10.59□□□□□ -0.71
LIME1-209ENST00000494776 TMEM218A2RU14 115 aa10.58□□□□□ -0.72
LIME1-209ENST00000494776 RPS10P46783 165 aaKnown RBP10.58□□□□□ -0.72
LIME1-209ENST00000494776 MIAQ16674 131 aa10.58□□□□□ -0.72
LIME1-209ENST00000494776 MRPL51Q4U2R6 128 aaKnown RBP10.58□□□□□ -0.72
LIME1-209ENST00000494776 AMMECR1LQ6DCA0 310 aa10.58□□□□□ -0.72
LIME1-209ENST00000494776 Q8N814 137 aa10.58□□□□□ -0.72
LIME1-209ENST00000494776 TMEM70Q9BUB7 260 aa10.58□□□□□ -0.72
LIME1-209ENST00000494776 PCLOQ9Y6V0 5065 aa10.58□□□□□ -0.72
LIME1-209ENST00000494776 IGLV5-52A0A0A0MRZ9 124 aa10.57□□□□□ -0.72
LIME1-209ENST00000494776 A0A1B0GUV1 79 aa10.57□□□□□ -0.72
LIME1-209ENST00000494776 CKS2P33552 79 aa10.57□□□□□ -0.72
LIME1-209ENST00000494776 ATP5L2Q7Z4Y8 100 aa10.57□□□□□ -0.72
LIME1-209ENST00000494776 IGLV4-60A0A075B6I1 120 aa10.56□□□□□ -0.72
LIME1-209ENST00000494776 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.56□□□□□ -0.72
LIME1-209ENST00000494776 IGKV2-29A2NJV5 120 aaPredicted RBP10.56□□□□□ -0.72
LIME1-209ENST00000494776 LINC00862A6NCI5 91 aa10.56□□□□□ -0.72
LIME1-209ENST00000494776 REG3AQ06141 175 aa10.56□□□□□ -0.72
LIME1-209ENST00000494776 RNASEKQ6P5S7 137 aaKnown RBP10.56□□□□□ -0.72
LIME1-209ENST00000494776 MAPKAPK5-AS1Q8N8E1 139 aa10.56□□□□□ -0.72
LIME1-209ENST00000494776 C20orf203Q8NBC4 194 aa10.56□□□□□ -0.72
LIME1-209ENST00000494776 NTN5Q8WTR8 489 aaPredicted RBP10.56□□□□□ -0.72
LIME1-209ENST00000494776 PRR34Q9NV39 138 aa10.56□□□□□ -0.72
LIME1-209ENST00000494776 TMEM242Q9NWH2 141 aa10.56□□□□□ -0.72
LIME1-209ENST00000494776 A0A1B0GXF2 115 aa10.55□□□□□ -0.72
LIME1-209ENST00000494776 H7C423 109 aa10.55□□□□□ -0.72
LIME1-209ENST00000494776 VCYO14598 125 aa10.55□□□□□ -0.72
LIME1-209ENST00000494776 HLA-DQA1P01909 254 aa10.55□□□□□ -0.72
LIME1-209ENST00000494776 FCER1GP30273 86 aa10.55□□□□□ -0.72
LIME1-209ENST00000494776 POLR2KP53803 58 aaKnown RBP10.55□□□□□ -0.72
LIME1-209ENST00000494776 SUMO2P61956 95 aaKnown RBP10.55□□□□□ -0.72
LIME1-209ENST00000494776 WFDC2Q14508 124 aa10.55□□□□□ -0.72
LIME1-209ENST00000494776 TRBV27A0A0K0K1C4 114 aa10.54□□□□□ -0.72
LIME1-209ENST00000494776 TSHBP01222 138 aa10.54□□□□□ -0.72
LIME1-209ENST00000494776 ADCYAP1P18509 176 aa10.54□□□□□ -0.72
LIME1-209ENST00000494776 GCSHP23434 173 aa10.54□□□□□ -0.72
LIME1-209ENST00000494776 NRACQ8N912 160 aa10.54□□□□□ -0.72
LIME1-209ENST00000494776 SEC11CQ9BY50 192 aa10.54□□□□□ -0.72
LIME1-209ENST00000494776 IGLV10-54A0A075B6I4 117 aa10.53□□□□□ -0.72
LIME1-209ENST00000494776 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.53□□□□□ -0.72
LIME1-209ENST00000494776 CDK2AP2O75956 126 aa10.53□□□□□ -0.72
LIME1-209ENST00000494776 TMEM101Q96IK0 257 aa10.53□□□□□ -0.72
LIME1-209ENST00000494776 BTF3L4Q96K17 158 aa10.53□□□□□ -0.72
LIME1-209ENST00000494776 KIR2DL4Q99706 377 aa10.53□□□□□ -0.72
LIME1-209ENST00000494776 RYR1P21817 5038 aa10.53□□□□□ -0.72
LIME1-209ENST00000494776 TRAV8-4A0A0B4J246 113 aa10.52□□□□□ -0.73
LIME1-209ENST00000494776 IGKV3OR2-268A0A0C4DH90 116 aa10.52□□□□□ -0.73
LIME1-209ENST00000494776 D6R8Y8 96 aa10.52□□□□□ -0.73
LIME1-209ENST00000494776 FGF6P10767 208 aa10.52□□□□□ -0.73
LIME1-209ENST00000494776 C20orf78Q9BR46 151 aa10.52□□□□□ -0.73
LIME1-209ENST00000494776 KRTAP17-1Q9BYP8 105 aa10.52□□□□□ -0.73
LIME1-209ENST00000494776 C7orf77A4D0Y5 90 aa10.51□□□□□ -0.73
LIME1-209ENST00000494776 TNFRSF6BO95407 300 aa10.51□□□□□ -0.73
LIME1-209ENST00000494776 PPBPP02775 128 aa10.51□□□□□ -0.73
LIME1-209ENST00000494776 ZNF25P17030 456 aaPredicted RBP10.51□□□□□ -0.73
LIME1-209ENST00000494776 C14orf177Q52M58 125 aa10.51□□□□□ -0.73
LIME1-209ENST00000494776 CTDSP1Q9GZU7 261 aa10.51□□□□□ -0.73
LIME1-209ENST00000494776 TRBV24-1A0A075B6N3 115 aa10.5□□□□□ -0.73
LIME1-209ENST00000494776 ESDP10768 282 aa10.5□□□□□ -0.73
LIME1-209ENST00000494776 ORMDL3Q8N138 153 aa10.5□□□□□ -0.73
LIME1-209ENST00000494776 IMMP2LQ96T52 175 aa10.5□□□□□ -0.73
LIME1-209ENST00000494776 KRTAP10-1P60331 282 aa10.49□□□□□ -0.73
LIME1-209ENST00000494776 TMEM136Q6ZRR5 245 aa10.49□□□□□ -0.73
LIME1-209ENST00000494776 OR5A1Q8NGJ0 315 aa10.49□□□□□ -0.73
LIME1-209ENST00000494776 USP17L23D6RBM5 183 aa10.48□□□□□ -0.73
LIME1-209ENST00000494776 PHOX2AO14813 284 aa10.48□□□□□ -0.73
LIME1-209ENST00000494776 NPYP01303 97 aa10.48□□□□□ -0.73
LIME1-209ENST00000494776 SMAGPQ0VAQ4 97 aa10.48□□□□□ -0.73
LIME1-209ENST00000494776 DGAT2L7PQ6IED9 249 aa10.48□□□□□ -0.73
LIME1-209ENST00000494776 PRELID3AQ96N28 172 aa10.48□□□□□ -0.73
LIME1-209ENST00000494776 TCAPO15273 167 aa10.47□□□□□ -0.73
LIME1-209ENST00000494776 S100PP25815 95 aa10.47□□□□□ -0.73
LIME1-209ENST00000494776 RPL32P62910 135 aaKnown RBP10.47□□□□□ -0.73
LIME1-209ENST00000494776 TMEM18Q96B42 140 aa10.47□□□□□ -0.73
LIME1-209ENST00000494776 SMIM2Q9BVW6 85 aa10.47□□□□□ -0.73
LIME1-209ENST00000494776 KRTAP26-1Q6PEX3 210 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms