RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 CNFNQ9BYD5 112 aa6.32□□□□□ -1.4
UFD1-210ENST00000494054 TRAV26-2A0A0B4J265 109 aa6.31□□□□□ -1.4
UFD1-210ENST00000494054 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
UFD1-210ENST00000494054 KRTAP10-4P60372 401 aaPredicted RBP6.31□□□□□ -1.4
UFD1-210ENST00000494054 BLOC1S1P78537 153 aa6.31□□□□□ -1.4
UFD1-210ENST00000494054 REG3AQ06141 175 aa6.31□□□□□ -1.4
UFD1-210ENST00000494054 LYPD6BQ8NI32 183 aa6.31□□□□□ -1.4
UFD1-210ENST00000494054 PGLYRP4Q96LB8 373 aa6.31□□□□□ -1.4
UFD1-210ENST00000494054 TMEM243Q9BU79 118 aa6.31□□□□□ -1.4
UFD1-210ENST00000494054 LRP1Q07954 4544 aaKnown RBP6.3□□□□□ -1.4
UFD1-210ENST00000494054 A0A1B0GUV1 79 aa6.3□□□□□ -1.4
UFD1-210ENST00000494054 TMEM250H0YL14 139 aa6.3□□□□□ -1.4
UFD1-210ENST00000494054 C9orf163Q8N9P6 203 aa6.3□□□□□ -1.4
UFD1-210ENST00000494054 RPL39LQ96EH5 51 aaKnown RBP6.3□□□□□ -1.4
UFD1-210ENST00000494054 FAT3Q8TDW7 4589 aa6.3□□□□□ -1.4
UFD1-210ENST00000494054 PANO1I0J062 215 aa6.29□□□□□ -1.4
UFD1-210ENST00000494054 GATCO43716 136 aaKnown RBP6.29□□□□□ -1.4
UFD1-210ENST00000494054 AMTP48728 403 aa6.29□□□□□ -1.4
UFD1-210ENST00000494054 CEBPGP53567 150 aa6.29□□□□□ -1.4
UFD1-210ENST00000494054 COTL1Q14019 142 aa6.29□□□□□ -1.4
UFD1-210ENST00000494054 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
UFD1-210ENST00000494054 FAM231DQ6ZW35 169 aa6.29□□□□□ -1.4
UFD1-210ENST00000494054 GAS8-AS1O95177 125 aa6.28□□□□□ -1.4
UFD1-210ENST00000494054 PKHD1L1Q86WI1 4243 aa6.28□□□□□ -1.4
UFD1-210ENST00000494054 TRAV8-4A0A0B4J246 113 aa6.27□□□□□ -1.41
UFD1-210ENST00000494054 A8MWL6 223 aa6.27□□□□□ -1.41
UFD1-210ENST00000494054 J3QL48 77 aa6.27□□□□□ -1.41
UFD1-210ENST00000494054 UBE2L6O14933 153 aa6.27□□□□□ -1.41
UFD1-210ENST00000494054 SLPIP03973 132 aa6.27□□□□□ -1.41
UFD1-210ENST00000494054 SDIM1Q6ZPB5 146 aa6.27□□□□□ -1.41
UFD1-210ENST00000494054 CLRN3Q8NCR9 226 aa6.27□□□□□ -1.41
UFD1-210ENST00000494054 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.27□□□□□ -1.41
UFD1-210ENST00000494054 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.26□□□□□ -1.41
UFD1-210ENST00000494054 A0A1B0GVG6 124 aa6.26□□□□□ -1.41
UFD1-210ENST00000494054 hDV102S1A0JD36 115 aa6.26□□□□□ -1.41
UFD1-210ENST00000494054 IGKV2-29A2NJV5 120 aaPredicted RBP6.26□□□□□ -1.41
UFD1-210ENST00000494054 SDHAF1A6NFY7 115 aa6.26□□□□□ -1.41
UFD1-210ENST00000494054 SRP19P09132 144 aaKnown RBP6.26□□□□□ -1.41
UFD1-210ENST00000494054 CT83Q5H943 113 aa6.26□□□□□ -1.41
UFD1-210ENST00000494054 SMIM15Q7Z3B0 74 aa6.26□□□□□ -1.41
UFD1-210ENST00000494054 LINC01551Q86U37 167 aa6.26□□□□□ -1.41
UFD1-210ENST00000494054 FAM210AQ96ND0 272 aa6.26□□□□□ -1.41
UFD1-210ENST00000494054 SMIM7Q9BQ49 75 aa6.26□□□□□ -1.41
UFD1-210ENST00000494054 EIF5A2Q9GZV4 153 aaKnown RBP6.26□□□□□ -1.41
UFD1-210ENST00000494054 IGKV3OR2-268A0A0C4DH90 116 aa6.25□□□□□ -1.41
UFD1-210ENST00000494054 FAM231BA6NCW3 169 aa6.25□□□□□ -1.41
UFD1-210ENST00000494054 GAGE12HA6NDE8 117 aa6.25□□□□□ -1.41
UFD1-210ENST00000494054 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
UFD1-210ENST00000494054 CNBPP62633 177 aaKnown RBP6.25□□□□□ -1.41
UFD1-210ENST00000494054 TRBV6-5A0A0K0K1A5 114 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 ZNF727A8MUV8 499 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 HIGD1CA8MV81 97 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 NDUFS6O75380 124 aaKnown RBP6.24□□□□□ -1.41
UFD1-210ENST00000494054 NCR2O95944 276 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 APCSP02743 223 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 FGF6P10767 208 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 AMMECR1LQ6DCA0 310 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 TEX261Q6UWH6 196 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 C15orf56Q8N910 161 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 TSKUQ8WUA8 353 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 RNF185Q96GF1 192 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 OSTCQ9NRP0 149 aa6.24□□□□□ -1.41
UFD1-210ENST00000494054 A0A1B0GUT8 65 aa6.23□□□□□ -1.41
UFD1-210ENST00000494054 H7C423 109 aa6.23□□□□□ -1.41
UFD1-210ENST00000494054 I3L3M4 83 aa6.23□□□□□ -1.41
UFD1-210ENST00000494054 TSHBP01222 138 aa6.23□□□□□ -1.41
UFD1-210ENST00000494054 ESDP10768 282 aa6.23□□□□□ -1.41
UFD1-210ENST00000494054 PMCHP20382 165 aa6.23□□□□□ -1.41
UFD1-210ENST00000494054 RPS10P46783 165 aaKnown RBP6.23□□□□□ -1.41
UFD1-210ENST00000494054 HNRNPA3P51991 378 aaKnown RBP6.23□□□□□ -1.41
UFD1-210ENST00000494054 CIRBPQ14011 172 aaKnown RBP6.23□□□□□ -1.41
UFD1-210ENST00000494054 RNASEKQ6P5S7 137 aaKnown RBP6.23□□□□□ -1.41
UFD1-210ENST00000494054 CHCHD10Q8WYQ3 142 aaPredicted RBP6.23□□□□□ -1.41
UFD1-210ENST00000494054 TMEM191AQ9H0A3 160 aa6.23□□□□□ -1.41
UFD1-210ENST00000494054 V9GYV3 84 aa6.23□□□□□ -1.41
UFD1-210ENST00000494054 C9JQL5 133 aa6.22□□□□□ -1.41
UFD1-210ENST00000494054 CHTF8P0CG12 524 aa6.22□□□□□ -1.41
UFD1-210ENST00000494054 RAB4AP20338 218 aa6.22□□□□□ -1.41
UFD1-210ENST00000494054 POLR2KP53803 58 aaKnown RBP6.22□□□□□ -1.41
UFD1-210ENST00000494054 RPL37AP61513 92 aaKnown RBP6.22□□□□□ -1.41
UFD1-210ENST00000494054 AMN1Q8IY45 258 aa6.22□□□□□ -1.41
UFD1-210ENST00000494054 BORCS7Q96B45 105 aa6.22□□□□□ -1.41
UFD1-210ENST00000494054 ST20Q9HBF5 79 aa6.22□□□□□ -1.41
UFD1-210ENST00000494054 AP5S1Q9NUS5 200 aa6.22□□□□□ -1.41
UFD1-210ENST00000494054 TMEM242Q9NWH2 141 aa6.22□□□□□ -1.41
UFD1-210ENST00000494054 HMCN2Q8NDA2 5059 aa6.21□□□□□ -1.42
UFD1-210ENST00000494054 IGHV3-64A0A075B6Q5 118 aa6.21□□□□□ -1.42
UFD1-210ENST00000494054 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.21□□□□□ -1.42
UFD1-210ENST00000494054 SMKR1H3BMG3 65 aa6.21□□□□□ -1.42
UFD1-210ENST00000494054 SRSF3P84103 164 aaKnown RBP6.21□□□□□ -1.42
UFD1-210ENST00000494054 HIGD2BQ4VC39 106 aa6.21□□□□□ -1.42
UFD1-210ENST00000494054 NUP35Q8NFH5 326 aa6.21□□□□□ -1.42
UFD1-210ENST00000494054 ISOC2Q96AB3 205 aa6.21□□□□□ -1.42
UFD1-210ENST00000494054 RPL23P62829 140 aaKnown RBP6.2□□□□□ -1.42
UFD1-210ENST00000494054 FOXI1Q12951 378 aa6.2□□□□□ -1.42
UFD1-210ENST00000494054 TMEM241Q24JQ0 296 aa6.2□□□□□ -1.42
UFD1-210ENST00000494054 CFAP161Q6P656 301 aa6.2□□□□□ -1.42
UFD1-210ENST00000494054 OR5A1Q8NGJ0 315 aa6.2□□□□□ -1.42
UFD1-210ENST00000494054 A0A087WYN8 130 aa6.19□□□□□ -1.42
UFD1-210ENST00000494054 GVQW2A0A096LPI5 108 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms