RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 FBN1P35555 2871 aaKnown RBP7.61□□□□□ -1.19
CLCN6-208ENST00000494028 HSD52Q0P140 79 aa7.61□□□□□ -1.19
CLCN6-208ENST00000494028 OVOL2Q9BRP0 275 aa7.61□□□□□ -1.19
CLCN6-208ENST00000494028 TRBV10-1A0A0K0K1A3 114 aa7.6□□□□□ -1.19
CLCN6-208ENST00000494028 SIVA1O15304 175 aa7.6□□□□□ -1.19
CLCN6-208ENST00000494028 WIPF1O43516 503 aa7.6□□□□□ -1.19
CLCN6-208ENST00000494028 KRTAP24-1Q3LI83 254 aa7.6□□□□□ -1.19
CLCN6-208ENST00000494028 TMEM97Q5BJF2 176 aa7.6□□□□□ -1.19
CLCN6-208ENST00000494028 PHLDA1Q8WV24 401 aaPredicted RBP7.6□□□□□ -1.19
CLCN6-208ENST00000494028 CST9LQ9H4G1 147 aa7.6□□□□□ -1.19
CLCN6-208ENST00000494028 IGHV3-38A0A0C4DH36 116 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 GAGE12BA1L429 117 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 E9PLD3 99 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 GAGE7O76087 117 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 GAGE12FP0CL80 117 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 GAGE12GP0CL81 117 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 GAGE12IP0CL82 117 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 EMP1P54849 157 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 C12orf54Q6X4T0 127 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 NFE4Q86UQ8 179 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 LINC00612Q8N6U2 182 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 FAM104AQ969W3 186 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 OPRPNQ99935 248 aaPredicted RBP7.59□□□□□ -1.19
CLCN6-208ENST00000494028 CHAC1Q9BUX1 264 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 HIGD1BQ9P298 99 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 PYGO1Q9Y3Y4 419 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 X6R8D5 127 aa7.59□□□□□ -1.19
CLCN6-208ENST00000494028 NOTCH3Q9UM47 2321 aa7.58□□□□□ -1.2
CLCN6-208ENST00000494028 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.58□□□□□ -1.2
CLCN6-208ENST00000494028 IGKV2-29A2NJV5 120 aaPredicted RBP7.58□□□□□ -1.2
CLCN6-208ENST00000494028 NPSP0C0P6 89 aa7.58□□□□□ -1.2
CLCN6-208ENST00000494028 COTL1Q14019 142 aa7.58□□□□□ -1.2
CLCN6-208ENST00000494028 PAPPA-AS1Q5QFB9 102 aa7.58□□□□□ -1.2
CLCN6-208ENST00000494028 Q6ZUT4 128 aa7.58□□□□□ -1.2
CLCN6-208ENST00000494028 WFDC9Q8NEX5 89 aa7.58□□□□□ -1.2
CLCN6-208ENST00000494028 OR11H2Q8NH07 326 aa7.58□□□□□ -1.2
CLCN6-208ENST00000494028 PRADC1Q9BSG0 188 aa7.58□□□□□ -1.2
CLCN6-208ENST00000494028 SPANXA1Q9NS26 97 aa7.58□□□□□ -1.2
CLCN6-208ENST00000494028 UBE2D4Q9Y2X8 147 aa7.58□□□□□ -1.2
CLCN6-208ENST00000494028 TENM1Q9UKZ4 2725 aa7.57□□□□□ -1.2
CLCN6-208ENST00000494028 LINC00694P0DN24 101 aa7.57□□□□□ -1.2
CLCN6-208ENST00000494028 UBE2D3P61077 147 aa7.57□□□□□ -1.2
CLCN6-208ENST00000494028 UBE2D2P62837 147 aa7.57□□□□□ -1.2
CLCN6-208ENST00000494028 RPL36AP83881 106 aaKnown RBP7.57□□□□□ -1.2
CLCN6-208ENST00000494028 MAPKAPK5-AS1Q8N8E1 139 aa7.57□□□□□ -1.2
CLCN6-208ENST00000494028 ZNRF2Q8NHG8 242 aa7.57□□□□□ -1.2
CLCN6-208ENST00000494028 RPL36ALQ969Q0 106 aaKnown RBP7.57□□□□□ -1.2
CLCN6-208ENST00000494028 AMELXQ99217 191 aa7.57□□□□□ -1.2
CLCN6-208ENST00000494028 TRBV7-3A0A075B6L6 115 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 TRBV25-1A0A075B6N4 114 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 TRGV2A0A075B6R0 118 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 TRAV8-6A0A0B4J262 113 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 GAGE12JA6NER3 117 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 CIDEAO60543 219 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 ZNF22P17026 224 aaPredicted RBP7.56□□□□□ -1.2
CLCN6-208ENST00000494028 CRYBA4P53673 196 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 TSPEAR-AS2P59090 65 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 HERVK_113P61574 105 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 GAGE1Q13065 139 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 GAGE4Q13068 117 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 GAGE5Q13069 117 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 GAGE13Q4V321 117 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 SLC25A29Q8N8R3 303 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 KIR2DL5BQ8NHK3 375 aa7.56□□□□□ -1.2
CLCN6-208ENST00000494028 LOC100131303A0A0U1RQF7 123 aa7.55□□□□□ -1.2
CLCN6-208ENST00000494028 TRBV6-4A0A1B0GX49 114 aa7.55□□□□□ -1.2
CLCN6-208ENST00000494028 ZNF25P17030 456 aaPredicted RBP7.55□□□□□ -1.2
CLCN6-208ENST00000494028 SEC11AP67812 179 aa7.55□□□□□ -1.2
CLCN6-208ENST00000494028 CEMP1Q6PRD7 247 aaPredicted RBP7.55□□□□□ -1.2
CLCN6-208ENST00000494028 SBSPONQ8IVN8 264 aa7.55□□□□□ -1.2
CLCN6-208ENST00000494028 TIMM21Q9BVV7 248 aa7.55□□□□□ -1.2
CLCN6-208ENST00000494028 ZMAT5Q9UDW3 170 aaKnown RBP7.55□□□□□ -1.2
CLCN6-208ENST00000494028 A0A0J9YXV3 536 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 MYMXA0A1B0GTQ4 84 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 SMIM9A6NGZ8 99 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 TAX1BP3O14907 124 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 APOC4P55056 127 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 FHL2Q14192 279 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 DEFB135Q30KP9 77 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 RNASE13Q5GAN3 156 aaKnown RBP7.54□□□□□ -1.2
CLCN6-208ENST00000494028 NTM-AS1Q6ZSK4 140 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 Q6ZVH6 145 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 DAZ4Q86SG3 579 aaKnown RBP7.54□□□□□ -1.2
CLCN6-208ENST00000494028 ORAOV1Q8WV07 137 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 DAZ3Q9NR90 486 aaKnown RBP7.54□□□□□ -1.2
CLCN6-208ENST00000494028 COX11Q9Y6N1 276 aa7.54□□□□□ -1.2
CLCN6-208ENST00000494028 TRGV4A0A0C4DH28 118 aa7.53□□□□□ -1.2
CLCN6-208ENST00000494028 TMEM223A0PJW6 202 aa7.53□□□□□ -1.2
CLCN6-208ENST00000494028 MRPS36P82909 103 aaKnown RBP7.53□□□□□ -1.2
CLCN6-208ENST00000494028 TMEM170BQ5T4T1 132 aa7.53□□□□□ -1.2
CLCN6-208ENST00000494028 VCX2Q9H322 139 aa7.53□□□□□ -1.2
CLCN6-208ENST00000494028 COL6A5A8TX70 2615 aa7.53□□□□□ -1.2
CLCN6-208ENST00000494028 ZNF815PA8K554 130 aa7.52□□□□□ -1.21
CLCN6-208ENST00000494028 FXYD2P54710 66 aa7.52□□□□□ -1.21
CLCN6-208ENST00000494028 PLEKHB2Q96CS7 222 aa7.52□□□□□ -1.21
CLCN6-208ENST00000494028 IGHV4-28A0A0C4DH34 117 aa7.51□□□□□ -1.21
CLCN6-208ENST00000494028 LYRM9A8MSI8 78 aa7.51□□□□□ -1.21
CLCN6-208ENST00000494028 IGHV4-30-4P0DP06 118 aa7.51□□□□□ -1.21
CLCN6-208ENST00000494028 TAL2Q16559 108 aa7.51□□□□□ -1.21
CLCN6-208ENST00000494028 LINC00469Q8N7U9 141 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms