RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 FA2HQ7L5A8 372 aa10.3□□□□□ -0.76
ACTB-213ENST00000493945 Q8N8P6 123 aa10.3□□□□□ -0.76
ACTB-213ENST00000493945 CHCHD5Q9BSY4 110 aa10.3□□□□□ -0.76
ACTB-213ENST00000493945 CHCHD7Q9BUK0 85 aa10.3□□□□□ -0.76
ACTB-213ENST00000493945 A0A087WX48 190 aa10.29□□□□□ -0.76
ACTB-213ENST00000493945 LOC389332A0A1B0GUA5 103 aa10.29□□□□□ -0.76
ACTB-213ENST00000493945 H7C423 109 aa10.29□□□□□ -0.76
ACTB-213ENST00000493945 TTC32Q5I0X7 151 aa10.29□□□□□ -0.76
ACTB-213ENST00000493945 C10orf126Q8N4M7 172 aa10.29□□□□□ -0.76
ACTB-213ENST00000493945 Q9UF83 564 aa10.29□□□□□ -0.76
ACTB-213ENST00000493945 LINC00588Q9Y4M8 146 aa10.29□□□□□ -0.76
ACTB-213ENST00000493945 SIVA1O15304 175 aa10.28□□□□□ -0.76
ACTB-213ENST00000493945 GAS8-AS1O95177 125 aa10.28□□□□□ -0.76
ACTB-213ENST00000493945 LY6G6CO95867 125 aa10.28□□□□□ -0.76
ACTB-213ENST00000493945 LINC00476Q8WZB0 136 aa10.28□□□□□ -0.76
ACTB-213ENST00000493945 C1orf196B1AJZ1 125 aa10.27□□□□□ -0.77
ACTB-213ENST00000493945 AMMECR1LQ6DCA0 310 aa10.27□□□□□ -0.77
ACTB-213ENST00000493945 TMEM262E9PQX1 116 aa10.26□□□□□ -0.77
ACTB-213ENST00000493945 TSHBP01222 138 aa10.26□□□□□ -0.77
ACTB-213ENST00000493945 ZNF25P17030 456 aaPredicted RBP10.26□□□□□ -0.77
ACTB-213ENST00000493945 LAGE3Q14657 143 aa10.26□□□□□ -0.77
ACTB-213ENST00000493945 C18orf32Q8TCD1 76 aa10.26□□□□□ -0.77
ACTB-213ENST00000493945 TMEM101Q96IK0 257 aa10.26□□□□□ -0.77
ACTB-213ENST00000493945 AP5S1Q9NUS5 200 aa10.26□□□□□ -0.77
ACTB-213ENST00000493945 BAGE3Q86Y29 109 aa10.25□□□□□ -0.77
ACTB-213ENST00000493945 Q9H8V8 135 aa10.25□□□□□ -0.77
ACTB-213ENST00000493945 IFI27P40305 119 aaPredicted RBP10.24□□□□□ -0.77
ACTB-213ENST00000493945 LINC01556Q5JQF7 62 aa10.24□□□□□ -0.77
ACTB-213ENST00000493945 DGAT2L7PQ6IED9 249 aa10.24□□□□□ -0.77
ACTB-213ENST00000493945 CHCHD1Q96BP2 118 aaKnown RBP10.24□□□□□ -0.77
ACTB-213ENST00000493945 TENM2Q9NT68 2774 aa10.23□□□□□ -0.77
ACTB-213ENST00000493945 DNAH10OSP0CZ25 163 aa10.23□□□□□ -0.77
ACTB-213ENST00000493945 RNASEKQ6P5S7 137 aaKnown RBP10.23□□□□□ -0.77
ACTB-213ENST00000493945 NTM-AS1Q6ZSK4 140 aa10.23□□□□□ -0.77
ACTB-213ENST00000493945 NIT1Q86X76 327 aa10.23□□□□□ -0.77
ACTB-213ENST00000493945 WFDC10BQ8IUB3 73 aa10.23□□□□□ -0.77
ACTB-213ENST00000493945 CYSLTR1Q9Y271 337 aa10.23□□□□□ -0.77
ACTB-213ENST00000493945 IGLV2-18A0A075B6J9 118 aa10.22□□□□□ -0.77
ACTB-213ENST00000493945 CRPP02741 224 aa10.22□□□□□ -0.77
ACTB-213ENST00000493945 LINC00614P0C842 121 aa10.22□□□□□ -0.77
ACTB-213ENST00000493945 Q0VG73 95 aa10.22□□□□□ -0.77
ACTB-213ENST00000493945 GAGE6Q13070 117 aa10.22□□□□□ -0.77
ACTB-213ENST00000493945 STARD9Q9P2P6 4700 aa10.22□□□□□ -0.77
ACTB-213ENST00000493945 DYNC2H1Q8NCM8 4307 aaKnown RBP10.21□□□□□ -0.77
ACTB-213ENST00000493945 CSMD3Q7Z407 3707 aa10.21□□□□□ -0.77
ACTB-213ENST00000493945 LCE6AA0A183 80 aa10.21□□□□□ -0.77
ACTB-213ENST00000493945 A0A1B0GUV1 79 aa10.21□□□□□ -0.77
ACTB-213ENST00000493945 HSBP1O75506 76 aa10.21□□□□□ -0.77
ACTB-213ENST00000493945 ESDP10768 282 aa10.21□□□□□ -0.77
ACTB-213ENST00000493945 BTF3P20290 206 aaKnown RBP10.21□□□□□ -0.77
ACTB-213ENST00000493945 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.77
ACTB-213ENST00000493945 C20orf203Q8NBC4 194 aa10.21□□□□□ -0.77
ACTB-213ENST00000493945 OR5A1Q8NGJ0 315 aa10.21□□□□□ -0.77
ACTB-213ENST00000493945 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.77
ACTB-213ENST00000493945 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.2□□□□□ -0.78
ACTB-213ENST00000493945 IGKV2-29A2NJV5 120 aaPredicted RBP10.2□□□□□ -0.78
ACTB-213ENST00000493945 FGF6P10767 208 aa10.2□□□□□ -0.78
ACTB-213ENST00000493945 TIMM21Q9BVV7 248 aa10.2□□□□□ -0.78
ACTB-213ENST00000493945 LINC01546A6NGU7 62 aa10.19□□□□□ -0.78
ACTB-213ENST00000493945 ANGP03950 147 aaKnown RBP10.19□□□□□ -0.78
ACTB-213ENST00000493945 NPSP0C0P6 89 aa10.19□□□□□ -0.78
ACTB-213ENST00000493945 C2orf66Q6UXQ4 117 aa10.19□□□□□ -0.78
ACTB-213ENST00000493945 Q6ZN92 141 aa10.19□□□□□ -0.78
ACTB-213ENST00000493945 MRPL52Q86TS9 123 aaKnown RBP10.19□□□□□ -0.78
ACTB-213ENST00000493945 DEFB104AQ8WTQ1 72 aa10.19□□□□□ -0.78
ACTB-213ENST00000493945 RMI2Q96E14 147 aa10.19□□□□□ -0.78
ACTB-213ENST00000493945 CSDC2Q9Y534 153 aaKnown RBP10.19□□□□□ -0.78
ACTB-213ENST00000493945 NBDYA0A0U1RRE5 68 aa10.18□□□□□ -0.78
ACTB-213ENST00000493945 IGHV3-30P01768 117 aa10.18□□□□□ -0.78
ACTB-213ENST00000493945 IGHV3-33P01772 117 aa10.18□□□□□ -0.78
ACTB-213ENST00000493945 HBDP02042 147 aa10.18□□□□□ -0.78
ACTB-213ENST00000493945 IGHV3-30-3P0DP02 117 aa10.18□□□□□ -0.78
ACTB-213ENST00000493945 IGHV3-30-5P0DP03 117 aa10.18□□□□□ -0.78
ACTB-213ENST00000493945 RBX1P62877 108 aa10.18□□□□□ -0.78
ACTB-213ENST00000493945 MPV17L2Q567V2 206 aa10.18□□□□□ -0.78
ACTB-213ENST00000493945 TRAV8-3A0A0A6YYJ7 113 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST1H2BKO60814 126 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST1H2BJP06899 126 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST1H2BOP23527 126 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST1H2BBP33778 126 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST1H2BDP58876 126 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST1H2BCP62807 126 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST2H2BEQ16778 126 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.17□□□□□ -0.78
ACTB-213ENST00000493945 NFE4Q86UQ8 179 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST1H2BHQ93079 126 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST1H2BNQ99877 126 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 HIST1H2BMQ99879 126 aa10.17□□□□□ -0.78
ACTB-213ENST00000493945 PYGO1Q9Y3Y4 419 aa10.16□□□□□ -0.78
ACTB-213ENST00000493945 S100A6P06703 90 aa10.15□□□□□ -0.78
ACTB-213ENST00000493945 TOMM6Q96B49 74 aa10.15□□□□□ -0.78
ACTB-213ENST00000493945 TMEM141Q96I45 108 aa10.15□□□□□ -0.78
ACTB-213ENST00000493945 TIMM17AQ99595 171 aa10.15□□□□□ -0.78
ACTB-213ENST00000493945 C2orf88Q9BSF0 95 aa10.15□□□□□ -0.78
ACTB-213ENST00000493945 KLK12Q9UKR0 248 aa10.15□□□□□ -0.78
ACTB-213ENST00000493945 UBE2D4Q9Y2X8 147 aa10.15□□□□□ -0.78
ACTB-213ENST00000493945 COX11Q9Y6N1 276 aa10.15□□□□□ -0.78
ACTB-213ENST00000493945 SERF1AO75920 110 aa10.14□□□□□ -0.79
ACTB-213ENST00000493945 ATP5LO75964 103 aa10.14□□□□□ -0.79
ACTB-213ENST00000493945 MRPS36P82909 103 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms