RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 TAF9BQ9HBM6 251 aa2.05□□□□□ -2.08
GTF3A-208ENST00000493903 COPZ2Q9P299 210 aa2.05□□□□□ -2.08
GTF3A-208ENST00000493903 BOKQ9UMX3 212 aaPredicted RBP2.05□□□□□ -2.08
GTF3A-208ENST00000493903 DYNC2H1Q8NCM8 4307 aaKnown RBP2.04□□□□□ -2.08
GTF3A-208ENST00000493903 A0A087WSZ3 146 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 hDV103S1A0JD37 113 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 OR2T8A6NH00 312 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 M0R233 179 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 CRPP02741 224 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 BRS3P32247 399 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 ZNF93P35789 620 aaPredicted RBP2.04□□□□□ -2.08
GTF3A-208ENST00000493903 KRTAP10-1P60331 282 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 CDK6Q00534 326 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 CDK5R1Q15078 307 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 CCDC58Q4VC31 144 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 FP248Q71RG6 208 aaPredicted RBP2.04□□□□□ -2.08
GTF3A-208ENST00000493903 TEX29Q8N6K0 151 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 OR5D14Q8NGL3 314 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 MUCL1Q96DR8 90 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 SCN3AQ9NY46 2000 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 HYDINQ4G0P3 5121 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 DNAH3Q8TD57 4116 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 VWFP04275 2813 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 NOTCH1P46531 2555 aa2.04□□□□□ -2.08
GTF3A-208ENST00000493903 FREM1Q5H8C1 2179 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 MED12Q93074 2177 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 TRAV27A0A087WT01 109 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 IGKV2D-26A0A0A0MRZ7 120 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 TRAV14DV4A0A0A6YYC5 116 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 A0A1B0GW64 132 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 TCRBV4S1A1TA0A5B7 111 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 GPX1P07203 203 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 FABP4P15090 132 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 EVI2AP22794 236 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 C2orf82Q6UX34 121 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 COA5Q86WW8 74 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 OR4S1Q8NGB4 309 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 OR8J3Q8NGG0 315 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 BRK1Q8WUW1 75 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 C4orf3Q8WVX3 66 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 PFDN5Q99471 154 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 EXPH5Q8NEV8 1989 aa2.03□□□□□ -2.08
GTF3A-208ENST00000493903 SACSQ9NZJ4 4579 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 DSPPQ9NZW4 1301 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 B4DSR2 109 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 SAA1P0DJI8 122 aaPredicted RBP2.02□□□□□ -2.09
GTF3A-208ENST00000493903 COX4I1P13073 169 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 TPT1P13693 172 aaKnown RBP2.02□□□□□ -2.09
GTF3A-208ENST00000493903 FOXA3P55318 350 aaPredicted RBP2.02□□□□□ -2.09
GTF3A-208ENST00000493903 LSM3P62310 102 aaKnown RBP2.02□□□□□ -2.09
GTF3A-208ENST00000493903 NCMAPQ5T1S8 102 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 C1orf134Q5TEV5 83 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 C10orf105Q8TEF2 133 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 ZCCHC13Q8WW36 166 aaKnown RBP2.02□□□□□ -2.09
GTF3A-208ENST00000493903 TP53RKQ96S44 253 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 TPT1P8Q9HAU6 139 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 TPRKBQ9Y3C4 175 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 FREM3P0C091 2139 aa2.02□□□□□ -2.09
GTF3A-208ENST00000493903 TANC2Q9HCD6 1990 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 DNAH9Q9NYC9 4486 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 HERC2O95714 4834 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 DNAH1Q9P2D7 4330 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.01□□□□□ -2.09
GTF3A-208ENST00000493903 EFCAB10A6NFE3 127 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 UQCRQO14949 82 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 QRFPP83859 136 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 C1orf137Q5JT78 98 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 C10orf55Q5SWW7 151 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 SCIMPQ6UWF3 145 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 TMEM14EPQ6UXP3 125 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 Q6ZRN7 208 aaPredicted RBP2.01□□□□□ -2.09
GTF3A-208ENST00000493903 ARPINQ7Z6K5 226 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 LRRC18Q8N456 261 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 RAB37Q96AX2 223 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 OR4C12Q96R67 309 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 TSC22D3Q99576 134 aa2.01□□□□□ -2.09
GTF3A-208ENST00000493903 NINQ8N4C6 2090 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 C5orf58C9J3I9 102 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 MT-ND4LP03901 98 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 HIST1H1AQ02539 215 aaPredicted RBP2□□□□□ -2.09
GTF3A-208ENST00000493903 TMEM244Q5VVB8 128 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 HAGHLQ6PII5 290 aaPredicted RBP2□□□□□ -2.09
GTF3A-208ENST00000493903 Q96M85 177 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 AP1S3Q96PC3 154 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 NIT2Q9NQR4 276 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 CALML5Q9NZT1 146 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 CADP27708 2225 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 WNK1Q9H4A3 2382 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 PLCE1Q9P212 2302 aa2□□□□□ -2.09
GTF3A-208ENST00000493903 RYR1P21817 5038 aa1.99□□□□□ -2.09
GTF3A-208ENST00000493903 ALPK2Q86TB3 2170 aa1.99□□□□□ -2.09
GTF3A-208ENST00000493903 TRAV10A0A0B4J240 114 aa1.99□□□□□ -2.09
GTF3A-208ENST00000493903 NDUFA2O43678 99 aa1.99□□□□□ -2.09
GTF3A-208ENST00000493903 ERC2-IT1O76042 136 aa1.99□□□□□ -2.09
GTF3A-208ENST00000493903 HBDP02042 147 aa1.99□□□□□ -2.09
GTF3A-208ENST00000493903 EFNA4P52798 201 aa1.99□□□□□ -2.09
GTF3A-208ENST00000493903 CIRBPQ14011 172 aaKnown RBP1.99□□□□□ -2.09
GTF3A-208ENST00000493903 HSD17B12Q53GQ0 312 aa1.99□□□□□ -2.09
GTF3A-208ENST00000493903 ZNF833PQ6ZTB9 187 aa1.99□□□□□ -2.09
GTF3A-208ENST00000493903 C1orf54Q8WWF1 131 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms