RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 NCR2O95944 276 aa8.47□□□□□ -1.05
UPF3A-210ENST00000493727 RHOHQ15669 191 aa8.47□□□□□ -1.05
UPF3A-210ENST00000493727 RNF185Q96GF1 192 aa8.47□□□□□ -1.05
UPF3A-210ENST00000493727 PRADC1Q9BSG0 188 aa8.47□□□□□ -1.05
UPF3A-210ENST00000493727 PRO0255Q9UI72 69 aa8.47□□□□□ -1.05
UPF3A-210ENST00000493727 HHLA3Q9XRX5 114 aa8.47□□□□□ -1.05
UPF3A-210ENST00000493727 APOBP04114 4563 aaKnown RBP8.47□□□□□ -1.05
UPF3A-210ENST00000493727 D6R8Y8 96 aa8.46□□□□□ -1.06
UPF3A-210ENST00000493727 SMKR1H3BMG3 65 aa8.46□□□□□ -1.06
UPF3A-210ENST00000493727 LINC00315P59091 139 aa8.46□□□□□ -1.06
UPF3A-210ENST00000493727 KIAA1644Q3SXP7 199 aa8.46□□□□□ -1.06
UPF3A-210ENST00000493727 UBE2DNLQ8IWF7 75 aa8.46□□□□□ -1.06
UPF3A-210ENST00000493727 ORMDL3Q8N138 153 aa8.46□□□□□ -1.06
UPF3A-210ENST00000493727 KRTAP4-5Q9BYR2 181 aa8.46□□□□□ -1.06
UPF3A-210ENST00000493727 TRAV26-1A0A087WT03 109 aa8.45□□□□□ -1.06
UPF3A-210ENST00000493727 A0A0J9YY99 117 aa8.45□□□□□ -1.06
UPF3A-210ENST00000493727 TRBV6-4A0A1B0GX49 114 aa8.45□□□□□ -1.06
UPF3A-210ENST00000493727 PRSS29PA6NIE9 313 aa8.45□□□□□ -1.06
UPF3A-210ENST00000493727 PPBPP02775 128 aa8.45□□□□□ -1.06
UPF3A-210ENST00000493727 CRYBA4P53673 196 aa8.45□□□□□ -1.06
UPF3A-210ENST00000493727 OR10J3Q5JRS4 329 aa8.45□□□□□ -1.06
UPF3A-210ENST00000493727 SLC25A29Q8N8R3 303 aa8.45□□□□□ -1.06
UPF3A-210ENST00000493727 NACAE9PAV3 2078 aa8.44□□□□□ -1.06
UPF3A-210ENST00000493727 M0QY20 66 aa8.44□□□□□ -1.06
UPF3A-210ENST00000493727 RTL8CO15255 209 aa8.44□□□□□ -1.06
UPF3A-210ENST00000493727 PPP1R17O96001 155 aa8.44□□□□□ -1.06
UPF3A-210ENST00000493727 PRELID3AQ96N28 172 aa8.44□□□□□ -1.06
UPF3A-210ENST00000493727 C1orf43Q9BWL3 253 aa8.44□□□□□ -1.06
UPF3A-210ENST00000493727 TNFRSF18Q9Y5U5 241 aa8.44□□□□□ -1.06
UPF3A-210ENST00000493727 TRBV10-1A0A0K0K1A3 114 aa8.43□□□□□ -1.06
UPF3A-210ENST00000493727 GAGE12JA6NER3 117 aa8.43□□□□□ -1.06
UPF3A-210ENST00000493727 TRGC2P03986 189 aa8.43□□□□□ -1.06
UPF3A-210ENST00000493727 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
UPF3A-210ENST00000493727 GAGE1Q13065 139 aa8.43□□□□□ -1.06
UPF3A-210ENST00000493727 GAGE4Q13068 117 aa8.43□□□□□ -1.06
UPF3A-210ENST00000493727 GAGE5Q13069 117 aa8.43□□□□□ -1.06
UPF3A-210ENST00000493727 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
UPF3A-210ENST00000493727 RPL39LQ96EH5 51 aaKnown RBP8.43□□□□□ -1.06
UPF3A-210ENST00000493727 HERC1Q15751 4861 aa8.43□□□□□ -1.06
UPF3A-210ENST00000493727 LOC100131303A0A0U1RQF7 123 aa8.42□□□□□ -1.06
UPF3A-210ENST00000493727 SRIP30626 198 aa8.42□□□□□ -1.06
UPF3A-210ENST00000493727 C15orf53Q8NAA6 179 aa8.42□□□□□ -1.06
UPF3A-210ENST00000493727 NEXN-AS1Q8NBZ9 246 aa8.42□□□□□ -1.06
UPF3A-210ENST00000493727 ZNRF2Q8NHG8 242 aa8.42□□□□□ -1.06
UPF3A-210ENST00000493727 DNAJC30Q96LL9 226 aa8.42□□□□□ -1.06
UPF3A-210ENST00000493727 ST20Q9HBF5 79 aa8.42□□□□□ -1.06
UPF3A-210ENST00000493727 NIT2Q9NQR4 276 aa8.42□□□□□ -1.06
UPF3A-210ENST00000493727 DNAH5Q8TE73 4624 aa8.41□□□□□ -1.06
UPF3A-210ENST00000493727 H3BNG1 76 aa8.41□□□□□ -1.06
UPF3A-210ENST00000493727 M0R2N4 97 aa8.41□□□□□ -1.06
UPF3A-210ENST00000493727 GAS8-AS1O95177 125 aa8.41□□□□□ -1.06
UPF3A-210ENST00000493727 TNFRSF6BO95407 300 aa8.41□□□□□ -1.06
UPF3A-210ENST00000493727 NPYP01303 97 aa8.41□□□□□ -1.06
UPF3A-210ENST00000493727 NRACQ8N912 160 aa8.41□□□□□ -1.06
UPF3A-210ENST00000493727 MAP1LC3AQ9H492 121 aa8.41□□□□□ -1.06
UPF3A-210ENST00000493727 LAMTOR2Q9Y2Q5 125 aa8.41□□□□□ -1.06
UPF3A-210ENST00000493727 ICOSQ9Y6W8 199 aa8.41□□□□□ -1.06
UPF3A-210ENST00000493727 TRBV7-3A0A075B6L6 115 aa8.4□□□□□ -1.06
UPF3A-210ENST00000493727 PHOX2AO14813 284 aa8.4□□□□□ -1.06
UPF3A-210ENST00000493727 NUDT3O95989 172 aa8.4□□□□□ -1.06
UPF3A-210ENST00000493727 VSIG2Q96IQ7 327 aa8.4□□□□□ -1.06
UPF3A-210ENST00000493727 ALKBH7Q9BT30 221 aaPredicted RBP8.4□□□□□ -1.06
UPF3A-210ENST00000493727 A0A096LPF7 62 aa8.39□□□□□ -1.07
UPF3A-210ENST00000493727 LOC389332A0A1B0GUA5 103 aa8.39□□□□□ -1.07
UPF3A-210ENST00000493727 SDHAF1A6NFY7 115 aa8.39□□□□□ -1.07
UPF3A-210ENST00000493727 C1orf196B1AJZ1 125 aa8.39□□□□□ -1.07
UPF3A-210ENST00000493727 SUMO2P61956 95 aaKnown RBP8.39□□□□□ -1.07
UPF3A-210ENST00000493727 MRPL23Q16540 153 aaKnown RBP8.39□□□□□ -1.07
UPF3A-210ENST00000493727 Q6ZR54 194 aa8.39□□□□□ -1.07
UPF3A-210ENST00000493727 SH2D6Q7Z4S9 175 aa8.39□□□□□ -1.07
UPF3A-210ENST00000493727 C20orf78Q9BR46 151 aa8.39□□□□□ -1.07
UPF3A-210ENST00000493727 Q9UF83 564 aa8.39□□□□□ -1.07
UPF3A-210ENST00000493727 IGLV2-18A0A075B6J9 118 aa8.38□□□□□ -1.07
UPF3A-210ENST00000493727 IGHV3-38A0A0C4DH36 116 aa8.38□□□□□ -1.07
UPF3A-210ENST00000493727 TRBV6-5A0A0K0K1A5 114 aa8.38□□□□□ -1.07
UPF3A-210ENST00000493727 PMCHP20382 165 aa8.37□□□□□ -1.07
UPF3A-210ENST00000493727 UBE2D3P61077 147 aa8.37□□□□□ -1.07
UPF3A-210ENST00000493727 UBE2D2P62837 147 aa8.37□□□□□ -1.07
UPF3A-210ENST00000493727 IQCJQ1A5X6 159 aa8.37□□□□□ -1.07
UPF3A-210ENST00000493727 C1orf134Q5TEV5 83 aa8.37□□□□□ -1.07
UPF3A-210ENST00000493727 NEGR1Q7Z3B1 354 aa8.37□□□□□ -1.07
UPF3A-210ENST00000493727 DAZ4Q86SG3 579 aaKnown RBP8.37□□□□□ -1.07
UPF3A-210ENST00000493727 ATP6V0E2Q8NHE4 81 aa8.37□□□□□ -1.07
UPF3A-210ENST00000493727 TMEM70Q9BUB7 260 aa8.37□□□□□ -1.07
UPF3A-210ENST00000493727 SMIM2Q9BVW6 85 aa8.37□□□□□ -1.07
UPF3A-210ENST00000493727 DAZ3Q9NR90 486 aaKnown RBP8.37□□□□□ -1.07
UPF3A-210ENST00000493727 I3L3M4 83 aa8.36□□□□□ -1.07
UPF3A-210ENST00000493727 VCYO14598 125 aa8.36□□□□□ -1.07
UPF3A-210ENST00000493727 FCER1GP30273 86 aa8.36□□□□□ -1.07
UPF3A-210ENST00000493727 RAB5BP61020 215 aa8.36□□□□□ -1.07
UPF3A-210ENST00000493727 COTL1Q14019 142 aa8.36□□□□□ -1.07
UPF3A-210ENST00000493727 BAGE3Q86Y29 109 aa8.36□□□□□ -1.07
UPF3A-210ENST00000493727 PRSS3P2Q8NHM4 247 aa8.36□□□□□ -1.07
UPF3A-210ENST00000493727 KIR2DL4Q99706 377 aa8.36□□□□□ -1.07
UPF3A-210ENST00000493727 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
UPF3A-210ENST00000493727 RPL32P62910 135 aaKnown RBP8.35□□□□□ -1.07
UPF3A-210ENST00000493727 FA2HQ7L5A8 372 aa8.35□□□□□ -1.07
UPF3A-210ENST00000493727 C18orf32Q8TCD1 76 aa8.35□□□□□ -1.07
UPF3A-210ENST00000493727 NXT2Q9NPJ8 142 aaKnown RBP8.35□□□□□ -1.07
UPF3A-210ENST00000493727 IFI27P40305 119 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms