RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 PLXNB3Q9ULL4 1909 aa15.15■□□□□ 0.02
RNF40-203ENST00000493683 LMO4P61968 165 aa15.15■□□□□ 0.02
RNF40-203ENST00000493683 KIR2DL5BQ8NHK3 375 aa15.15■□□□□ 0.02
RNF40-203ENST00000493683 EBI3Q14213 229 aa15.15■□□□□ 0.02
RNF40-203ENST00000493683 DENND4CQ5VZ89 1909 aa15.15■□□□□ 0.02
RNF40-203ENST00000493683 ZNF295-AS1Q8N0V1 137 aa15.14■□□□□ 0.01
RNF40-203ENST00000493683 HIVEP2P31629 2446 aa15.14■□□□□ 0.01
RNF40-203ENST00000493683 IGLV4-3A0A075B6K6 122 aa15.14■□□□□ 0.01
RNF40-203ENST00000493683 TRAV23DV6A0A075B6W5 121 aa15.13■□□□□ 0.01
RNF40-203ENST00000493683 Q6ZTI0 123 aa15.13■□□□□ 0.01
RNF40-203ENST00000493683 TIMM17BO60830 172 aa15.13■□□□□ 0.01
RNF40-203ENST00000493683 LINC00308Q8TCZ7 52 aa15.13■□□□□ 0.01
RNF40-203ENST00000493683 NRGNQ92686 78 aa15.13■□□□□ 0.01
RNF40-203ENST00000493683 LINC00467Q9BRT7 94 aa15.13■□□□□ 0.01
RNF40-203ENST00000493683 PYGO1Q9Y3Y4 419 aa15.13■□□□□ 0.01
RNF40-203ENST00000493683 TNCP24821 2201 aa15.12■□□□□ 0.01
RNF40-203ENST00000493683 DNAJC9-AS1A6NH13 148 aa15.12■□□□□ 0.01
RNF40-203ENST00000493683 LINC00269Q8N2A0 174 aa15.12■□□□□ 0.01
RNF40-203ENST00000493683 CDKN2A-AS1Q9UH64 79 aa15.12■□□□□ 0.01
RNF40-203ENST00000493683 NOTCH4Q99466 2003 aa15.12■□□□□ 0.01
RNF40-203ENST00000493683 CHCHD10Q8WYQ3 142 aaPredicted RBP15.12■□□□□ 0.01
RNF40-203ENST00000493683 TP53TG3Q9ULZ0 132 aa15.12■□□□□ 0.01
RNF40-203ENST00000493683 TTC28Q96AY4 2481 aa15.12■□□□□ 0.01
RNF40-203ENST00000493683 FAM222AQ5U5X8 452 aa15.12■□□□□ 0.01
RNF40-203ENST00000493683 RNF183Q96D59 192 aa15.12■□□□□ 0.01
RNF40-203ENST00000493683 FAM236DA0A1B0GTK5 79 aa15.11■□□□□ 0.01
RNF40-203ENST00000493683 A0A1W2PNU3 283 aaPredicted RBP15.11■□□□□ 0.01
RNF40-203ENST00000493683 PRB2P02812 416 aaPredicted RBP15.11■□□□□ 0.01
RNF40-203ENST00000493683 FAM236CP0DP71 79 aa15.11■□□□□ 0.01
RNF40-203ENST00000493683 TEX49A0A1B0GTD5 131 aa15.11■□□□□ 0.01
RNF40-203ENST00000493683 DEFB4AO15263 64 aa15.11■□□□□ 0.01
RNF40-203ENST00000493683 TRBV6-5A0A0K0K1A5 114 aa15.1■□□□□ 0.01
RNF40-203ENST00000493683 ATP5EP56381 51 aaPredicted RBP15.1■□□□□ 0.01
RNF40-203ENST00000493683 TP73-AS1Q9UF72 201 aa15.1■□□□□ 0.01
RNF40-203ENST00000493683 MT-ATP8P03928 68 aa15.1■□□□□ 0.01
RNF40-203ENST00000493683 Q6YL49 198 aa15.1■□□□□ 0.01
RNF40-203ENST00000493683 C11orf45Q8TAV5 145 aa15.1■□□□□ 0.01
RNF40-203ENST00000493683 C3orf22Q8N5N4 141 aa15.09■□□□□ 0.01
RNF40-203ENST00000493683 TRBV6-4A0A1B0GX49 114 aa15.09■□□□□ 0.01
RNF40-203ENST00000493683 DEFB114Q30KQ6 69 aa15.09■□□□□ 0.01
RNF40-203ENST00000493683 BRK1Q8WUW1 75 aa15.09■□□□□ 0.01
RNF40-203ENST00000493683 Q6ZPA2 131 aa15.09■□□□□ 0.01
RNF40-203ENST00000493683 M0QY20 66 aa15.09■□□□□ 0.01
RNF40-203ENST00000493683 IMUPQ9GZP8 106 aa15.09■□□□□ 0.01
RNF40-203ENST00000493683 COL4A3Q01955 1670 aa15.08■□□□□ 0.01
RNF40-203ENST00000493683 OBSL1O75147 1896 aa15.08■□□□□ 0.01
RNF40-203ENST00000493683 C20orf197Q8N268 126 aa15.08■□□□□ 0
RNF40-203ENST00000493683 Q8NA96 180 aa15.08■□□□□ 0
RNF40-203ENST00000493683 YPEL4Q96NS1 127 aa15.08■□□□□ 0
RNF40-203ENST00000493683 ZFAND3Q9H8U3 227 aa15.08■□□□□ 0
RNF40-203ENST00000493683 TNRC6BQ9UPQ9 1833 aaKnown RBP15.08■□□□□ 0
RNF40-203ENST00000493683 IGKV4-1P06312 121 aa15.07■□□□□ 0
RNF40-203ENST00000493683 ANKHD1Q8IWZ3 2542 aaKnown RBP15.07■□□□□ 0
RNF40-203ENST00000493683 TRBV27A0A0K0K1C4 114 aa15.07■□□□□ 0
RNF40-203ENST00000493683 SPG11Q96JI7 2443 aa15.07■□□□□ 0
RNF40-203ENST00000493683 LY6LH3BQJ8 138 aa15.06■□□□□ 0
RNF40-203ENST00000493683 NDUFC1O43677 76 aa15.06■□□□□ 0
RNF40-203ENST00000493683 TRIAP1O43715 76 aa15.06■□□□□ 0
RNF40-203ENST00000493683 RNF185Q96GF1 192 aa15.06■□□□□ 0
RNF40-203ENST00000493683 CFAP126Q5VTH2 177 aa15.06■□□□□ 0
RNF40-203ENST00000493683 CRIP3Q6Q6R5 217 aa15.06■□□□□ 0
RNF40-203ENST00000493683 SDIM1Q6ZPB5 146 aa15.06■□□□□ 0
RNF40-203ENST00000493683 C20orf173Q96LM9 149 aa15.05■□□□□ -0
RNF40-203ENST00000493683 V9GYY9 64 aa15.05■□□□□ -0
RNF40-203ENST00000493683 TRBV6-8A0A0A6YYG3 113 aa15.05■□□□□ -0
RNF40-203ENST00000493683 USP17L23D6RBM5 183 aa15.04■□□□□ -0
RNF40-203ENST00000493683 HIGD2AQ9BW72 106 aa15.04■□□□□ -0
RNF40-203ENST00000493683 LINC01548A6NM66 108 aa15.03■□□□□ -0
RNF40-203ENST00000493683 NDUFC2-KCTD14E9PQ53 114 aa15.03■□□□□ -0
RNF40-203ENST00000493683 CRIP1P50238 77 aa15.02■□□□□ -0
RNF40-203ENST00000493683 MIFP14174 115 aa15.02■□□□□ -0
RNF40-203ENST00000493683 FAM240AA0A1B0GVK7 77 aa15.02□□□□□ -0.01
RNF40-203ENST00000493683 DENND4AQ7Z401 1863 aa15.02□□□□□ -0.01
RNF40-203ENST00000493683 MAPKAPK5-AS1Q8N8E1 139 aa15.02□□□□□ -0.01
RNF40-203ENST00000493683 SVIPQ8NHG7 77 aa15.01□□□□□ -0.01
RNF40-203ENST00000493683 ENHOQ6UWT2 76 aa15.01□□□□□ -0.01
RNF40-203ENST00000493683 C1orf229Q6ZS94 237 aaPredicted RBP15.01□□□□□ -0.01
RNF40-203ENST00000493683 CACNA1AO00555 2505 aa15.01□□□□□ -0.01
RNF40-203ENST00000493683 CRYGDP07320 174 aa15□□□□□ -0.01
RNF40-203ENST00000493683 CASC2Q6XLA1 102 aa15□□□□□ -0.01
RNF40-203ENST00000493683 MUC7Q8TAX7 377 aa15□□□□□ -0.01
RNF40-203ENST00000493683 FAM19A1Q7Z5A9 133 aa14.99□□□□□ -0.01
RNF40-203ENST00000493683 IGKV2-24A0A0C4DH68 120 aa14.99□□□□□ -0.01
RNF40-203ENST00000493683 WNK1Q9H4A3 2382 aa14.99□□□□□ -0.01
RNF40-203ENST00000493683 HILS1P60008 231 aa14.99□□□□□ -0.01
RNF40-203ENST00000493683 IGLV2-11P01706 119 aa14.98□□□□□ -0.01
RNF40-203ENST00000493683 IGHV4-31P0DP07 118 aa14.98□□□□□ -0.01
RNF40-203ENST00000493683 MRPS36P82909 103 aaKnown RBP14.97□□□□□ -0.01
RNF40-203ENST00000493683 PRORYQ9H606 182 aa14.97□□□□□ -0.01
RNF40-203ENST00000493683 SERP2Q8N6R1 65 aa14.97□□□□□ -0.01
RNF40-203ENST00000493683 SONP18583 2426 aaKnown RBP14.97□□□□□ -0.01
RNF40-203ENST00000493683 PIK3CD-AS1Q5SR53 167 aa14.96□□□□□ -0.01
RNF40-203ENST00000493683 CUL9Q8IWT3 2517 aa14.96□□□□□ -0.02
RNF40-203ENST00000493683 DHRS4-AS1Q9P1J3 65 aa14.95□□□□□ -0.02
RNF40-203ENST00000493683 LST1O00453 97 aa14.95□□□□□ -0.02
RNF40-203ENST00000493683 NRACQ8N912 160 aa14.95□□□□□ -0.02
RNF40-203ENST00000493683 K7ERS5 55 aa14.95□□□□□ -0.02
RNF40-203ENST00000493683 SYCNQ0VAF6 134 aa14.95□□□□□ -0.02
RNF40-203ENST00000493683 C6orf99Q4VX62 202 aa14.95□□□□□ -0.02
RNF40-203ENST00000493683 CSPG4Q6UVK1 2322 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms