RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 SETXQ7Z333 2677 aaKnown RBP-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 PRKDCP78527 4128 aaKnown RBP-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 GNG14A0A1W2PPG7 69 aa-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 NCR2O95944 276 aa-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 TNFP01375 233 aa-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 IGLC6P0CF74 106 aa-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 SPAG11BQ08648 103 aa-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 MIC13Q5XKP0 118 aa-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 DISP2A7MBM2 1401 aa-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 FLNBO75369 2602 aaKnown RBP-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 ARHGEF10O15013 1369 aa-0.58□□□□□ -2.5
SYCP1-208ENST00000493377 NBEAL1Q6ZS30 2694 aa-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 LRP6O75581 1613 aa-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 CHD8Q9HCK8 2581 aa-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 HYDINQ4G0P3 5121 aa-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 SCGB1A1P11684 91 aa-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 ALX1Q15699 326 aa-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 KLK9Q2XQG4 91 aa-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 PRG4Q92954 1404 aaPredicted RBP-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 RYR1P21817 5038 aa-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 TSC2P49815 1807 aa-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 PATJQ8NI35 1801 aa-0.59□□□□□ -2.5
SYCP1-208ENST00000493377 UBR4Q5T4S7 5183 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 STAB2Q8WWQ8 2551 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 C10orf71Q711Q0 1435 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 FAM236AA0A1B0GUQ0 79 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 FAM236BA0A1B0GV22 79 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 H0YJX3 145 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 I3L2K1 104 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 CBLN1P23435 193 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 CCL18P55774 89 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 UBE2G1P62253 170 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 CCL8P80075 99 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 CFAP126Q5VTH2 177 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 MRPL40Q9NQ50 206 aaKnown RBP-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 SCN3BQ9NY72 215 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 DOCK2Q92608 1830 aa-0.6□□□□□ -2.51
SYCP1-208ENST00000493377 ATRQ13535 2644 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 GOLGA4Q13439 2230 aaKnown RBP-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 SBF2Q86WG5 1849 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 A6NIN4 97 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 LOC730098B7Z3J9 87 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 BCE1O60756 84 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 SMIM6P0DI80 62 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 PIPP12273 146 aaPredicted RBP-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 RPL7L1Q6DKI1 246 aaKnown RBP-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 SCIMPQ6UWF3 145 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 Q6ZUT4 128 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 TAC4Q86UU9 113 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 SELENOSQ9BQE4 189 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 TP53AIP1Q9HCN2 124 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 URB1O60287 2271 aaKnown RBP-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 KIAA1109Q2LD37 5005 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 DOCK1Q14185 1865 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 IFT140Q96RY7 1462 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 ZNF236Q9UL36 1845 aa-0.61□□□□□ -2.51
SYCP1-208ENST00000493377 CASKIN1Q8WXD9 1431 aa-0.62□□□□□ -2.51
SYCP1-208ENST00000493377 MAP1AP78559 2803 aaPredicted RBP-0.62□□□□□ -2.51
SYCP1-208ENST00000493377 PAPPAQ13219 1627 aa-0.62□□□□□ -2.51
SYCP1-208ENST00000493377 FAM92AA1XBS5 289 aa-0.62□□□□□ -2.51
SYCP1-208ENST00000493377 LINC00694P0DN24 101 aa-0.62□□□□□ -2.51
SYCP1-208ENST00000493377 HIST1H1AQ02539 215 aaPredicted RBP-0.62□□□□□ -2.51
SYCP1-208ENST00000493377 LINC00312Q9Y6C7 94 aa-0.62□□□□□ -2.51
SYCP1-208ENST00000493377 SETD2Q9BYW2 2564 aaPredicted RBP-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 SPAARA0A1B0GVQ0 90 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 NPFFO15130 113 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 NDUFB6O95139 128 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 SIX6O95475 246 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 IL5P05113 134 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 B2MP61769 119 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 DCDP81605 110 aaKnown RBP-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 CTAGE3PQ8IX95 158 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 SMIM4Q8WVI0 70 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 AIF1LQ9BQI0 150 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 GSKIPQ9P0R6 139 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 DNAJC13O75165 2243 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 ERCC6L2Q5T890 1561 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 STARD9Q9P2P6 4700 aa-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 CNOT1A5YKK6 2376 aaKnown RBP-0.63□□□□□ -2.51
SYCP1-208ENST00000493377 FLGP20930 4061 aaPredicted RBP-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 EPPK1P58107 5090 aaKnown RBP-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 SPEF2Q9C093 1822 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 MRC1P22897 1456 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 ZNF518AQ6AHZ1 1483 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 K7EQZ3 153 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 M0R129 80 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 NEFHP12036 1026 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 S100A3P33764 101 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 RRAS2P62070 204 aaPredicted RBP-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 SPTSSAQ969W0 71 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 PSMG3Q9BT73 122 aaPredicted RBP-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 AGPAT4-IT1Q9H0P7 198 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 R4GMQ9 66 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 LAMA2P24043 3122 aaKnown RBP-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 FHAD1B1AJZ9 1412 aa-0.64□□□□□ -2.51
SYCP1-208ENST00000493377 MXRA5Q9NR99 2828 aa-0.65□□□□□ -2.51
SYCP1-208ENST00000493377 TRBV6-1A0A0K0K1D8 114 aa-0.65□□□□□ -2.51
SYCP1-208ENST00000493377 J3QR89 54 aa-0.65□□□□□ -2.51
SYCP1-208ENST00000493377 SPRR2EP22531 72 aa-0.65□□□□□ -2.51
SYCP1-208ENST00000493377 GUCA1AP43080 201 aaPredicted RBP-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms