RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 H7C1H1 209 aa8.52□□□□□ -1.05
SAMM50-204ENST00000493161 ARPC5O15511 151 aa8.52□□□□□ -1.05
SAMM50-204ENST00000493161 RASL11AQ6T310 242 aa8.52□□□□□ -1.05
SAMM50-204ENST00000493161 FER1L6-AS1Q8NA97 138 aa8.52□□□□□ -1.05
SAMM50-204ENST00000493161 FAM213BQ8TBF2 198 aa8.52□□□□□ -1.05
SAMM50-204ENST00000493161 MBD3L1Q8WWY6 194 aa8.52□□□□□ -1.05
SAMM50-204ENST00000493161 LPAP08519 4548 aa8.52□□□□□ -1.05
SAMM50-204ENST00000493161 UBE2L6O14933 153 aa8.51□□□□□ -1.05
SAMM50-204ENST00000493161 RPL35P42766 123 aaKnown RBP8.51□□□□□ -1.05
SAMM50-204ENST00000493161 AMTP48728 403 aa8.51□□□□□ -1.05
SAMM50-204ENST00000493161 CFAP161Q6P656 301 aa8.51□□□□□ -1.05
SAMM50-204ENST00000493161 PGLYRP4Q96LB8 373 aa8.51□□□□□ -1.05
SAMM50-204ENST00000493161 NIT2Q9NQR4 276 aa8.51□□□□□ -1.05
SAMM50-204ENST00000493161 PFDN1O60925 122 aa8.5□□□□□ -1.05
SAMM50-204ENST00000493161 SRSF9Q13242 221 aaKnown RBP eCLIP8.5□□□□□ -1.05
SAMM50-204ENST00000493161 SPINK6Q6UWN8 80 aa8.5□□□□□ -1.05
SAMM50-204ENST00000493161 OR2D3Q8NGH3 330 aa8.5□□□□□ -1.05
SAMM50-204ENST00000493161 CHCHD10Q8WYQ3 142 aaPredicted RBP8.5□□□□□ -1.05
SAMM50-204ENST00000493161 GVQW2A0A096LPI5 108 aaPredicted RBP8.49□□□□□ -1.05
SAMM50-204ENST00000493161 SMLR1H3BR10 107 aa8.49□□□□□ -1.05
SAMM50-204ENST00000493161 COTL1Q14019 142 aa8.49□□□□□ -1.05
SAMM50-204ENST00000493161 KCNRGQ8N5I3 272 aa8.49□□□□□ -1.05
SAMM50-204ENST00000493161 LINC00526Q96FQ7 95 aa8.49□□□□□ -1.05
SAMM50-204ENST00000493161 C19orf71A6NCJ1 209 aa8.48□□□□□ -1.05
SAMM50-204ENST00000493161 CACNG7P62955 275 aa8.48□□□□□ -1.05
SAMM50-204ENST00000493161 CCL20P78556 96 aa8.48□□□□□ -1.05
SAMM50-204ENST00000493161 LYZL1Q6UWQ5 148 aa8.48□□□□□ -1.05
SAMM50-204ENST00000493161 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.47□□□□□ -1.05
SAMM50-204ENST00000493161 TRAV26-2A0A0B4J265 109 aa8.47□□□□□ -1.05
SAMM50-204ENST00000493161 IGKV2-29A2NJV5 120 aaPredicted RBP8.47□□□□□ -1.05
SAMM50-204ENST00000493161 RAB19A4D1S5 217 aa8.47□□□□□ -1.05
SAMM50-204ENST00000493161 NTF3P20783 257 aa8.47□□□□□ -1.05
SAMM50-204ENST00000493161 FOXI1Q12951 378 aa8.47□□□□□ -1.05
SAMM50-204ENST00000493161 CENPWQ5EE01 88 aa8.47□□□□□ -1.05
SAMM50-204ENST00000493161 REG3GQ6UW15 175 aa8.47□□□□□ -1.05
SAMM50-204ENST00000493161 Q6ZNX1 250 aa8.47□□□□□ -1.05
SAMM50-204ENST00000493161 RPS20P60866 119 aaKnown RBP8.46□□□□□ -1.06
SAMM50-204ENST00000493161 GATD1Q8NB37 220 aa8.46□□□□□ -1.06
SAMM50-204ENST00000493161 C11orf52Q96A22 123 aa8.46□□□□□ -1.06
SAMM50-204ENST00000493161 H2AFB1P0C5Y9 115 aa8.45□□□□□ -1.06
SAMM50-204ENST00000493161 TRGC1P0CF51 173 aa8.45□□□□□ -1.06
SAMM50-204ENST00000493161 RNASEKQ6P5S7 137 aaKnown RBP8.45□□□□□ -1.06
SAMM50-204ENST00000493161 UMAD1C9J7I0 102 aa8.44□□□□□ -1.06
SAMM50-204ENST00000493161 F2Z2F3 143 aa8.44□□□□□ -1.06
SAMM50-204ENST00000493161 XCL1P47992 114 aa8.44□□□□□ -1.06
SAMM50-204ENST00000493161 AMMECR1LQ6DCA0 310 aa8.44□□□□□ -1.06
SAMM50-204ENST00000493161 Q6ZRP5 223 aa8.44□□□□□ -1.06
SAMM50-204ENST00000493161 RPL39LQ96EH5 51 aaKnown RBP8.44□□□□□ -1.06
SAMM50-204ENST00000493161 GNG13Q9P2W3 67 aa8.44□□□□□ -1.06
SAMM50-204ENST00000493161 TRBV20OR9-2A0A075B6H5 130 aa8.43□□□□□ -1.06
SAMM50-204ENST00000493161 IFNA1P01562 189 aa8.43□□□□□ -1.06
SAMM50-204ENST00000493161 FGF6P10767 208 aa8.43□□□□□ -1.06
SAMM50-204ENST00000493161 FOXA3P55318 350 aaPredicted RBP8.43□□□□□ -1.06
SAMM50-204ENST00000493161 C9orf62Q8N4C0 152 aa8.42□□□□□ -1.06
SAMM50-204ENST00000493161 CARD19Q96LW7 228 aa8.42□□□□□ -1.06
SAMM50-204ENST00000493161 LINC00474Q9P2X8 69 aa8.42□□□□□ -1.06
SAMM50-204ENST00000493161 CCL25O15444 150 aa8.41□□□□□ -1.06
SAMM50-204ENST00000493161 CTRLP40313 264 aa8.41□□□□□ -1.06
SAMM50-204ENST00000493161 GNG4P50150 75 aa8.41□□□□□ -1.06
SAMM50-204ENST00000493161 TWIST1Q15672 202 aa8.41□□□□□ -1.06
SAMM50-204ENST00000493161 MANBALQ9NQG1 85 aa8.41□□□□□ -1.06
SAMM50-204ENST00000493161 LINC00959A0A1B0GUT2 108 aa8.4□□□□□ -1.06
SAMM50-204ENST00000493161 A0A1W2PNN7 141 aa8.4□□□□□ -1.06
SAMM50-204ENST00000493161 XKRY2A2RUG3 117 aa8.4□□□□□ -1.06
SAMM50-204ENST00000493161 FAM231BA6NCW3 169 aa8.4□□□□□ -1.06
SAMM50-204ENST00000493161 ZNF345Q14585 488 aa8.4□□□□□ -1.06
SAMM50-204ENST00000493161 NUDT10Q8NFP7 164 aa8.4□□□□□ -1.06
SAMM50-204ENST00000493161 OR5A1Q8NGJ0 315 aa8.4□□□□□ -1.06
SAMM50-204ENST00000493161 NUDT11Q96G61 164 aa8.4□□□□□ -1.06
SAMM50-204ENST00000493161 IGHV1-58A0A0C4DH39 117 aa8.39□□□□□ -1.07
SAMM50-204ENST00000493161 H7C423 109 aa8.39□□□□□ -1.07
SAMM50-204ENST00000493161 NCR2O95944 276 aa8.39□□□□□ -1.07
SAMM50-204ENST00000493161 APCSP02743 223 aa8.39□□□□□ -1.07
SAMM50-204ENST00000493161 PTTG1IPP53801 180 aa8.39□□□□□ -1.07
SAMM50-204ENST00000493161 SYCNQ0VAF6 134 aa8.39□□□□□ -1.07
SAMM50-204ENST00000493161 CNFNQ9BYD5 112 aa8.39□□□□□ -1.07
SAMM50-204ENST00000493161 SDHAF1A6NFY7 115 aa8.38□□□□□ -1.07
SAMM50-204ENST00000493161 BCL2L11O43521 198 aa8.38□□□□□ -1.07
SAMM50-204ENST00000493161 GAGE2BQ13066 116 aa8.38□□□□□ -1.07
SAMM50-204ENST00000493161 SMIM12Q96EX1 92 aa8.37□□□□□ -1.07
SAMM50-204ENST00000493161 RNASE7Q9H1E1 156 aaKnown RBP8.37□□□□□ -1.07
SAMM50-204ENST00000493161 PSORS1C2Q9UIG4 136 aa8.37□□□□□ -1.07
SAMM50-204ENST00000493161 TRAV1-1A0A0B4J248 108 aa8.36□□□□□ -1.07
SAMM50-204ENST00000493161 KANTRA0A1W2PQU2 76 aa8.36□□□□□ -1.07
SAMM50-204ENST00000493161 ZNF561-AS1K7EIQ3 104 aa8.36□□□□□ -1.07
SAMM50-204ENST00000493161 TSHBP01222 138 aa8.36□□□□□ -1.07
SAMM50-204ENST00000493161 BCL2P10415 239 aa8.36□□□□□ -1.07
SAMM50-204ENST00000493161 ZNF25P17030 456 aaPredicted RBP8.36□□□□□ -1.07
SAMM50-204ENST00000493161 MED9Q9NWA0 146 aa8.36□□□□□ -1.07
SAMM50-204ENST00000493161 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 K7EN84 100 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 ESDP10768 282 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 PMCHP20382 165 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 CAMPP49913 170 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 MEF2BQ02080 365 aaPredicted RBP8.35□□□□□ -1.07
SAMM50-204ENST00000493161 C4orf48Q5BLP8 95 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 CD164L2Q6UWJ8 174 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 PRR26Q8N8Z3 221 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 TMEM101Q96IK0 257 aa8.35□□□□□ -1.07
SAMM50-204ENST00000493161 BTF3L4Q96K17 158 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 1713.4 ms