RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SMIM9A6NGZ8 99 aa10.05□□□□□ -0.8
PTPN7-216ENST00000492977 TEP1Q99973 2627 aaKnown RBP10.05□□□□□ -0.8
PTPN7-216ENST00000492977 NIPBLQ6KC79 2804 aaeCLIP10.05□□□□□ -0.8
PTPN7-216ENST00000492977 PMVKQ15126 192 aa10.05□□□□□ -0.8
PTPN7-216ENST00000492977 Q9UF83 564 aa10.05□□□□□ -0.8
PTPN7-216ENST00000492977 TRGV2A0A075B6R0 118 aa10.04□□□□□ -0.8
PTPN7-216ENST00000492977 DLEU1O43261 78 aa10.04□□□□□ -0.8
PTPN7-216ENST00000492977 APOC4P55056 127 aa10.04□□□□□ -0.8
PTPN7-216ENST00000492977 LCE2AQ5TA79 106 aaPredicted RBP10.04□□□□□ -0.8
PTPN7-216ENST00000492977 ZC2HC1BQ5TFG8 222 aa10.04□□□□□ -0.8
PTPN7-216ENST00000492977 BOD1L2Q8IYS8 172 aa10.04□□□□□ -0.8
PTPN7-216ENST00000492977 NOTCH3Q9UM47 2321 aa10.04□□□□□ -0.8
PTPN7-216ENST00000492977 ATRQ13535 2644 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 TRBV7-3A0A075B6L6 115 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 GAGE12BA1L429 117 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 K7EQD1 137 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 GAGE7O76087 117 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 GAGE12FP0CL80 117 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 GAGE12GP0CL81 117 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 GAGE12IP0CL82 117 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 FGF6P10767 208 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 PAPPA-AS1Q5QFB9 102 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 CST9LQ9H4G1 147 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 PYGO1Q9Y3Y4 419 aa10.03□□□□□ -0.8
PTPN7-216ENST00000492977 NPSP0C0P6 89 aa10.02□□□□□ -0.81
PTPN7-216ENST00000492977 RPL36AP83881 106 aaKnown RBP10.02□□□□□ -0.81
PTPN7-216ENST00000492977 C3orf56Q8N813 242 aa10.02□□□□□ -0.81
PTPN7-216ENST00000492977 RPL36ALQ969Q0 106 aaKnown RBP10.02□□□□□ -0.81
PTPN7-216ENST00000492977 NMUP48645 174 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 COTL1Q14019 142 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 ZNRF2Q8NHG8 242 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 X6R8D5 127 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 TENM1Q9UKZ4 2725 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 A0A1B0GV90 55 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 CYSRT1A8MQ03 144 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 SIVA1O15304 175 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 CRYBA4P53673 196 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 SLC25A29Q8N8R3 303 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 CHCHD7Q9BUK0 85 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 TP73-AS1Q9UF72 201 aa10.01□□□□□ -0.81
PTPN7-216ENST00000492977 TRBV6-4A0A1B0GX49 114 aa10□□□□□ -0.81
PTPN7-216ENST00000492977 DAZ4Q86SG3 579 aaKnown RBP10□□□□□ -0.81
PTPN7-216ENST00000492977 LINC00612Q8N6U2 182 aa10□□□□□ -0.81
PTPN7-216ENST00000492977 DAZ3Q9NR90 486 aaKnown RBP10□□□□□ -0.81
PTPN7-216ENST00000492977 IGKV2D-26A0A0A0MRZ7 120 aa9.99□□□□□ -0.81
PTPN7-216ENST00000492977 TCTAP57738 103 aa9.99□□□□□ -0.81
PTPN7-216ENST00000492977 BATFQ16520 125 aa9.99□□□□□ -0.81
PTPN7-216ENST00000492977 C2orf91Q6ZV80 131 aa9.99□□□□□ -0.81
PTPN7-216ENST00000492977 PCP2Q8IVA1 136 aa9.99□□□□□ -0.81
PTPN7-216ENST00000492977 PHLDA1Q8WV24 401 aaPredicted RBP9.99□□□□□ -0.81
PTPN7-216ENST00000492977 SPANXA1Q9NS26 97 aa9.99□□□□□ -0.81
PTPN7-216ENST00000492977 IGLV4-69A0A075B6H9 119 aa9.98□□□□□ -0.81
PTPN7-216ENST00000492977 IGLV4-3A0A075B6K6 122 aa9.98□□□□□ -0.81
PTPN7-216ENST00000492977 TRGV4A0A0C4DH28 118 aa9.98□□□□□ -0.81
PTPN7-216ENST00000492977 IGHV3-38A0A0C4DH36 116 aa9.98□□□□□ -0.81
PTPN7-216ENST00000492977 EMP1P54849 157 aa9.98□□□□□ -0.81
PTPN7-216ENST00000492977 C12orf54Q6X4T0 127 aa9.98□□□□□ -0.81
PTPN7-216ENST00000492977 PRIMA1Q86XR5 153 aa9.98□□□□□ -0.81
PTPN7-216ENST00000492977 VCX2Q9H322 139 aa9.98□□□□□ -0.81
PTPN7-216ENST00000492977 VWFP04275 2813 aa9.98□□□□□ -0.81
PTPN7-216ENST00000492977 HINT1P49773 126 aaPredicted RBP9.97□□□□□ -0.81
PTPN7-216ENST00000492977 UBE2D3P61077 147 aa9.97□□□□□ -0.81
PTPN7-216ENST00000492977 UBE2D2P62837 147 aa9.97□□□□□ -0.81
PTPN7-216ENST00000492977 COL5A1-AS1Q5SY13 56 aa9.97□□□□□ -0.81
PTPN7-216ENST00000492977 OPRPNQ99935 248 aaPredicted RBP9.97□□□□□ -0.81
PTPN7-216ENST00000492977 FHL2Q14192 279 aa9.97□□□□□ -0.81
PTPN7-216ENST00000492977 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
PTPN7-216ENST00000492977 AMELXQ99217 191 aa9.97□□□□□ -0.81
PTPN7-216ENST00000492977 C11orf86A6NJI1 115 aa9.96□□□□□ -0.82
PTPN7-216ENST00000492977 LYRM9A8MSI8 78 aa9.96□□□□□ -0.82
PTPN7-216ENST00000492977 E9PLD3 99 aa9.96□□□□□ -0.82
PTPN7-216ENST00000492977 IGHV4-30-4P0DP06 118 aa9.96□□□□□ -0.82
PTPN7-216ENST00000492977 DEFB135Q30KP9 77 aa9.96□□□□□ -0.82
PTPN7-216ENST00000492977 MPV17L2Q567V2 206 aa9.96□□□□□ -0.82
PTPN7-216ENST00000492977 NFE4Q86UQ8 179 aa9.96□□□□□ -0.82
PTPN7-216ENST00000492977 PRADC1Q9BSG0 188 aa9.96□□□□□ -0.82
PTPN7-216ENST00000492977 TIMM21Q9BVV7 248 aa9.96□□□□□ -0.82
PTPN7-216ENST00000492977 UBE2D4Q9Y2X8 147 aa9.96□□□□□ -0.82
PTPN7-216ENST00000492977 GAGE12JA6NER3 117 aa9.95□□□□□ -0.82
PTPN7-216ENST00000492977 DEFB130BP0DP73 79 aa9.95□□□□□ -0.82
PTPN7-216ENST00000492977 DEFB130AP0DP74 79 aa9.95□□□□□ -0.82
PTPN7-216ENST00000492977 GAGE1Q13065 139 aa9.95□□□□□ -0.82
PTPN7-216ENST00000492977 GAGE4Q13068 117 aa9.95□□□□□ -0.82
PTPN7-216ENST00000492977 GAGE5Q13069 117 aa9.95□□□□□ -0.82
PTPN7-216ENST00000492977 GAGE13Q4V321 117 aa9.95□□□□□ -0.82
PTPN7-216ENST00000492977 OR11H2Q8NH07 326 aa9.95□□□□□ -0.82
PTPN7-216ENST00000492977 GTSF1LQ9H1H1 148 aa9.95□□□□□ -0.82
PTPN7-216ENST00000492977 HIGD1BQ9P298 99 aa9.95□□□□□ -0.82
PTPN7-216ENST00000492977 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.94□□□□□ -0.82
PTPN7-216ENST00000492977 IGKV2-29A2NJV5 120 aaPredicted RBP9.94□□□□□ -0.82
PTPN7-216ENST00000492977 HERVK_113P61574 105 aa9.94□□□□□ -0.82
PTPN7-216ENST00000492977 FAM104AQ969W3 186 aa9.94□□□□□ -0.82
PTPN7-216ENST00000492977 TRAV8-6A0A0B4J262 113 aa9.93□□□□□ -0.82
PTPN7-216ENST00000492977 MIFP14174 115 aa9.93□□□□□ -0.82
PTPN7-216ENST00000492977 MRPS36P82909 103 aaKnown RBP9.93□□□□□ -0.82
PTPN7-216ENST00000492977 EGFEM1PQ0D2K5 195 aa9.93□□□□□ -0.82
PTPN7-216ENST00000492977 SMAGPQ0VAQ4 97 aa9.93□□□□□ -0.82
PTPN7-216ENST00000492977 BVES-AS1Q5T3Y7 98 aa9.93□□□□□ -0.82
PTPN7-216ENST00000492977 RNF183Q96D59 192 aa9.93□□□□□ -0.82
PTPN7-216ENST00000492977 CEMP1Q6PRD7 247 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms