RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 UBE2DNLQ8IWF7 75 aa0.19□□□□□ -2.38
CLK1-213ENST00000492793 TTC9CQ8N5M4 171 aa0.19□□□□□ -2.38
CLK1-213ENST00000492793 AQP10Q96PS8 301 aa0.19□□□□□ -2.38
CLK1-213ENST00000492793 UNC13BO14795 1591 aa0.19□□□□□ -2.38
CLK1-213ENST00000492793 ASXL3Q9C0F0 2248 aa0.18□□□□□ -2.38
CLK1-213ENST00000492793 LRRC37A3O60309 1634 aa0.18□□□□□ -2.38
CLK1-213ENST00000492793 A0A1B0GV90 55 aa0.18□□□□□ -2.38
CLK1-213ENST00000492793 ZNF815PA8K554 130 aa0.18□□□□□ -2.38
CLK1-213ENST00000492793 AKAIN1P0CW23 69 aa0.18□□□□□ -2.38
CLK1-213ENST00000492793 CATR1Q13166 79 aa0.18□□□□□ -2.38
CLK1-213ENST00000492793 CFAP126Q5VTH2 177 aa0.18□□□□□ -2.38
CLK1-213ENST00000492793 PPP3R2Q96LZ3 170 aa0.18□□□□□ -2.38
CLK1-213ENST00000492793 R4GMQ9 66 aa0.18□□□□□ -2.38
CLK1-213ENST00000492793 MACF1Q9UPN3 7388 aaKnown RBP0.18□□□□□ -2.38
CLK1-213ENST00000492793 NCOR2Q9Y618 2525 aa0.18□□□□□ -2.38
CLK1-213ENST00000492793 PI4KAP42356 2102 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 PXDNQ92626 1479 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 M0R135 149 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 PIN1P1O15428 100 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 APOC2P02655 101 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 SPAG11BQ08648 103 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 NAIPQ13075 1403 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 SPAG11AQ6PDA7 123 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 PP6455Q8WZ26 134 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 ARAP2Q8WZ64 1704 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 SPANXDQ9BXN6 97 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 SCN3BQ9NY72 215 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 NWD2Q9ULI1 1742 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 LRP1Q07954 4544 aaKnown RBP0.17□□□□□ -2.38
CLK1-213ENST00000492793 PIEZO1Q92508 2521 aa0.17□□□□□ -2.38
CLK1-213ENST00000492793 MRC1P22897 1456 aa0.16□□□□□ -2.38
CLK1-213ENST00000492793 IFT172Q9UG01 1749 aa0.16□□□□□ -2.38
CLK1-213ENST00000492793 PPIP5K1Q6PFW1 1433 aa0.16□□□□□ -2.38
CLK1-213ENST00000492793 DLEU1O43261 78 aa0.16□□□□□ -2.38
CLK1-213ENST00000492793 TSLPQ969D9 159 aa0.16□□□□□ -2.38
CLK1-213ENST00000492793 LENEPQ9Y5L5 61 aa0.16□□□□□ -2.38
CLK1-213ENST00000492793 OTOGQ6ZRI0 2925 aa0.16□□□□□ -2.38
CLK1-213ENST00000492793 DOCK1Q14185 1865 aa0.16□□□□□ -2.38
CLK1-213ENST00000492793 IGSF10Q6WRI0 2623 aa0.16□□□□□ -2.38
CLK1-213ENST00000492793 PATJQ8NI35 1801 aa0.15□□□□□ -2.38
CLK1-213ENST00000492793 POLQO75417 2590 aa0.15□□□□□ -2.38
CLK1-213ENST00000492793 OOSP1A8MZH6 123 aa0.15□□□□□ -2.39
CLK1-213ENST00000492793 C8orf59Q8N0T1 100 aaPredicted RBP0.15□□□□□ -2.39
CLK1-213ENST00000492793 CYP4F30PQ9H0H9 118 aa0.15□□□□□ -2.39
CLK1-213ENST00000492793 NPVFQ9HCQ7 196 aa0.15□□□□□ -2.39
CLK1-213ENST00000492793 BCL9LQ86UU0 1499 aa0.15□□□□□ -2.39
CLK1-213ENST00000492793 CPSF1Q10570 1443 aaKnown RBP0.14□□□□□ -2.39
CLK1-213ENST00000492793 PRDM2Q13029 1718 aa0.14□□□□□ -2.39
CLK1-213ENST00000492793 TRBV7-3A0A075B6L6 115 aa0.14□□□□□ -2.39
CLK1-213ENST00000492793 CTXND1A0A1B0GTU2 59 aa0.14□□□□□ -2.39
CLK1-213ENST00000492793 IFNGP01579 166 aa0.14□□□□□ -2.39
CLK1-213ENST00000492793 MRPL54Q6P161 138 aaKnown RBP0.14□□□□□ -2.39
CLK1-213ENST00000492793 C5orf38Q86SI9 138 aa0.14□□□□□ -2.39
CLK1-213ENST00000492793 LINC00474Q9P2X8 69 aa0.14□□□□□ -2.39
CLK1-213ENST00000492793 V9GYH0 126 aa0.14□□□□□ -2.39
CLK1-213ENST00000492793 MYH8P13535 1937 aa0.14□□□□□ -2.39
CLK1-213ENST00000492793 CELSR2Q9HCU4 2923 aa0.14□□□□□ -2.39
CLK1-213ENST00000492793 TNFP01375 233 aa0.13□□□□□ -2.39
CLK1-213ENST00000492793 SPINK8P0C7L1 97 aa0.13□□□□□ -2.39
CLK1-213ENST00000492793 COMMD6Q7Z4G1 85 aa0.13□□□□□ -2.39
CLK1-213ENST00000492793 SMIM4Q8WVI0 70 aa0.13□□□□□ -2.39
CLK1-213ENST00000492793 AMELXQ99217 191 aa0.13□□□□□ -2.39
CLK1-213ENST00000492793 NDUFA4L2Q9NRX3 87 aa0.13□□□□□ -2.39
CLK1-213ENST00000492793 A2ML1A8K2U0 1454 aa0.13□□□□□ -2.39
CLK1-213ENST00000492793 A0A0D9SFI3 127 aa0.12□□□□□ -2.39
CLK1-213ENST00000492793 SSSCA1O60232 199 aa0.12□□□□□ -2.39
CLK1-213ENST00000492793 SNAPC5O75971 98 aa0.12□□□□□ -2.39
CLK1-213ENST00000492793 C9orf153Q5TBE3 101 aa0.12□□□□□ -2.39
CLK1-213ENST00000492793 MGST2Q99735 147 aa0.12□□□□□ -2.39
CLK1-213ENST00000492793 C2orf88Q9BSF0 95 aa0.12□□□□□ -2.39
CLK1-213ENST00000492793 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
CLK1-213ENST00000492793 ZNF609O15014 1411 aa0.12□□□□□ -2.39
CLK1-213ENST00000492793 DMBT1Q9UGM3 2413 aaPredicted RBP0.12□□□□□ -2.39
CLK1-213ENST00000492793 ZNF236Q9UL36 1845 aa0.11□□□□□ -2.39
CLK1-213ENST00000492793 KTN1Q86UP2 1357 aaKnown RBP0.11□□□□□ -2.39
CLK1-213ENST00000492793 FAM208BQ5VWN6 2430 aa0.11□□□□□ -2.39
CLK1-213ENST00000492793 LINC00587B1AMM8 73 aa0.11□□□□□ -2.39
CLK1-213ENST00000492793 F8VRH5 84 aa0.11□□□□□ -2.39
CLK1-213ENST00000492793 TPPP2P59282 170 aa0.11□□□□□ -2.39
CLK1-213ENST00000492793 CNFNQ9BYD5 112 aa0.11□□□□□ -2.39
CLK1-213ENST00000492793 LINC00472Q9H8W2 130 aa0.11□□□□□ -2.39
CLK1-213ENST00000492793 DYNLRB1Q9NP97 96 aa0.11□□□□□ -2.39
CLK1-213ENST00000492793 SPTBN2O15020 2390 aa0.11□□□□□ -2.39
CLK1-213ENST00000492793 QRICH2Q9H0J4 1663 aa0.11□□□□□ -2.39
CLK1-213ENST00000492793 HRNRQ86YZ3 2850 aaPredicted RBP0.11□□□□□ -2.39
CLK1-213ENST00000492793 DOCK2Q92608 1830 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 IGLC7A0M8Q6 106 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 F6UZH7 168 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 CORTO00230 105 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 HMGN4O00479 90 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 BCE1O60756 84 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 HAMPP81172 84 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 TMEM170BQ5T4T1 132 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 BAGE2Q86Y30 109 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 DPH3P1Q9H4G8 78 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 PRO0255Q9UI72 69 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 IER3IP1Q9Y5U9 82 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 LINC01558Q9Y6Z2 57 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 U3KQA8 63 aa0.1□□□□□ -2.39
CLK1-213ENST00000492793 ROBO1Q9Y6N7 1651 aa0.09□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms