RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 KRTAP29-1A8MX34 341 aaPredicted RBP11.13□□□□□ -0.63
SGMS1-204ENST00000492601 UBE2L6O14933 153 aa11.13□□□□□ -0.63
SGMS1-204ENST00000492601 TAGLN2P37802 199 aaKnown RBP11.13□□□□□ -0.63
SGMS1-204ENST00000492601 WDR73Q6P4I2 378 aa11.13□□□□□ -0.63
SGMS1-204ENST00000492601 C9orf163Q8N9P6 203 aa11.13□□□□□ -0.63
SGMS1-204ENST00000492601 PGLYRP4Q96LB8 373 aa11.13□□□□□ -0.63
SGMS1-204ENST00000492601 A0A1B0GUV1 79 aa11.12□□□□□ -0.63
SGMS1-204ENST00000492601 AMTP48728 403 aa11.12□□□□□ -0.63
SGMS1-204ENST00000492601 COTL1Q14019 142 aa11.12□□□□□ -0.63
SGMS1-204ENST00000492601 GATD1Q8NB37 220 aa11.12□□□□□ -0.63
SGMS1-204ENST00000492601 TRAV8-4A0A0B4J246 113 aa11.11□□□□□ -0.63
SGMS1-204ENST00000492601 CLRN3Q8NCR9 226 aa11.11□□□□□ -0.63
SGMS1-204ENST00000492601 CNFNQ9BYD5 112 aa11.11□□□□□ -0.63
SGMS1-204ENST00000492601 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
SGMS1-204ENST00000492601 hDV102S1A0JD36 115 aa11.1□□□□□ -0.63
SGMS1-204ENST00000492601 FOXA3P55318 350 aaPredicted RBP11.1□□□□□ -0.63
SGMS1-204ENST00000492601 ALKAL2Q6UX46 152 aa11.1□□□□□ -0.63
SGMS1-204ENST00000492601 Q6ZNX1 250 aa11.1□□□□□ -0.63
SGMS1-204ENST00000492601 GTSF1Q8WW33 167 aa11.1□□□□□ -0.63
SGMS1-204ENST00000492601 RPL39LQ96EH5 51 aaKnown RBP11.1□□□□□ -0.63
SGMS1-204ENST00000492601 hCG_2014768A0A024R1R8 64 aa11.09□□□□□ -0.63
SGMS1-204ENST00000492601 PANO1I0J062 215 aa11.09□□□□□ -0.63
SGMS1-204ENST00000492601 AKAP14Q86UN6 197 aa11.09□□□□□ -0.63
SGMS1-204ENST00000492601 IGKV3OR2-268A0A0C4DH90 116 aa11.08□□□□□ -0.64
SGMS1-204ENST00000492601 GATCO43716 136 aaKnown RBP11.08□□□□□ -0.64
SGMS1-204ENST00000492601 CEBPGP53567 150 aa11.08□□□□□ -0.64
SGMS1-204ENST00000492601 RPL37AP61513 92 aaKnown RBP11.08□□□□□ -0.64
SGMS1-204ENST00000492601 SDIM1Q6ZPB5 146 aa11.08□□□□□ -0.64
SGMS1-204ENST00000492601 CNBPP62633 177 aaKnown RBP11.07□□□□□ -0.64
SGMS1-204ENST00000492601 BLOC1S1P78537 153 aa11.07□□□□□ -0.64
SGMS1-204ENST00000492601 SMIM15Q7Z3B0 74 aa11.07□□□□□ -0.64
SGMS1-204ENST00000492601 TMEM250H0YL14 139 aa11.06□□□□□ -0.64
SGMS1-204ENST00000492601 AP5S1Q9NUS5 200 aa11.06□□□□□ -0.64
SGMS1-204ENST00000492601 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
SGMS1-204ENST00000492601 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
SGMS1-204ENST00000492601 GAGE12HA6NDE8 117 aa11.05□□□□□ -0.64
SGMS1-204ENST00000492601 SLPIP03973 132 aa11.05□□□□□ -0.64
SGMS1-204ENST00000492601 AMMECR1LQ6DCA0 310 aa11.05□□□□□ -0.64
SGMS1-204ENST00000492601 A8MWL6 223 aa11.04□□□□□ -0.64
SGMS1-204ENST00000492601 RNASEKQ6P5S7 137 aaKnown RBP11.04□□□□□ -0.64
SGMS1-204ENST00000492601 FAM231DQ6ZW35 169 aa11.04□□□□□ -0.64
SGMS1-204ENST00000492601 IGHV3-64A0A075B6Q5 118 aa11.03□□□□□ -0.64
SGMS1-204ENST00000492601 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.03□□□□□ -0.64
SGMS1-204ENST00000492601 SDHAF1A6NFY7 115 aa11.03□□□□□ -0.64
SGMS1-204ENST00000492601 APCSP02743 223 aa11.03□□□□□ -0.64
SGMS1-204ENST00000492601 HNRNPA3P51991 378 aaKnown RBP11.03□□□□□ -0.64
SGMS1-204ENST00000492601 NCR2O95944 276 aa11.02□□□□□ -0.65
SGMS1-204ENST00000492601 OXTP01178 125 aa11.02□□□□□ -0.65
SGMS1-204ENST00000492601 CHTF8P0CG12 524 aa11.02□□□□□ -0.65
SGMS1-204ENST00000492601 TEX261Q6UWH6 196 aa11.02□□□□□ -0.65
SGMS1-204ENST00000492601 C15orf56Q8N910 161 aa11.02□□□□□ -0.65
SGMS1-204ENST00000492601 LYPD6BQ8NI32 183 aa11.02□□□□□ -0.65
SGMS1-204ENST00000492601 DPH3Q96FX2 82 aa11.02□□□□□ -0.65
SGMS1-204ENST00000492601 FGF6P10767 208 aa11.01□□□□□ -0.65
SGMS1-204ENST00000492601 CHCHD10Q8WYQ3 142 aaPredicted RBP11.01□□□□□ -0.65
SGMS1-204ENST00000492601 SMIM7Q9BQ49 75 aa11.01□□□□□ -0.65
SGMS1-204ENST00000492601 EIF5A2Q9GZV4 153 aaKnown RBP11.01□□□□□ -0.65
SGMS1-204ENST00000492601 GAS8-AS1O95177 125 aa11□□□□□ -0.65
SGMS1-204ENST00000492601 PMCHP20382 165 aa11□□□□□ -0.65
SGMS1-204ENST00000492601 CIRBPQ14011 172 aaKnown RBP11□□□□□ -0.65
SGMS1-204ENST00000492601 HIGD2BQ4VC39 106 aa11□□□□□ -0.65
SGMS1-204ENST00000492601 CT83Q5H943 113 aa11□□□□□ -0.65
SGMS1-204ENST00000492601 CFAP161Q6P656 301 aa11□□□□□ -0.65
SGMS1-204ENST00000492601 BORCS7Q96B45 105 aa11□□□□□ -0.65
SGMS1-204ENST00000492601 H7C423 109 aa10.99□□□□□ -0.65
SGMS1-204ENST00000492601 I3L3M4 83 aa10.99□□□□□ -0.65
SGMS1-204ENST00000492601 HMCN2Q8NDA2 5059 aa10.98□□□□□ -0.65
SGMS1-204ENST00000492601 A0A087WYN8 130 aa10.98□□□□□ -0.65
SGMS1-204ENST00000492601 A0A1B0GUT8 65 aa10.98□□□□□ -0.65
SGMS1-204ENST00000492601 FAM231BA6NCW3 169 aa10.98□□□□□ -0.65
SGMS1-204ENST00000492601 HIGD1CA8MV81 97 aa10.98□□□□□ -0.65
SGMS1-204ENST00000492601 LINC01551Q86U37 167 aa10.98□□□□□ -0.65
SGMS1-204ENST00000492601 ST20Q9HBF5 79 aa10.98□□□□□ -0.65
SGMS1-204ENST00000492601 TRBV6-5A0A0K0K1A5 114 aa10.97□□□□□ -0.65
SGMS1-204ENST00000492601 ZNF727A8MUV8 499 aa10.97□□□□□ -0.65
SGMS1-204ENST00000492601 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
SGMS1-204ENST00000492601 TSKUQ8WUA8 353 aa10.97□□□□□ -0.65
SGMS1-204ENST00000492601 TMEM242Q9NWH2 141 aa10.97□□□□□ -0.65
SGMS1-204ENST00000492601 TSHBP01222 138 aa10.96□□□□□ -0.65
SGMS1-204ENST00000492601 RPS10P46783 165 aaKnown RBP10.96□□□□□ -0.65
SGMS1-204ENST00000492601 COX6A2Q02221 97 aa10.96□□□□□ -0.65
SGMS1-204ENST00000492601 TMEM101Q96IK0 257 aa10.96□□□□□ -0.65
SGMS1-204ENST00000492601 BTF3L4Q96K17 158 aa10.96□□□□□ -0.65
SGMS1-204ENST00000492601 FAM210AQ96ND0 272 aa10.96□□□□□ -0.65
SGMS1-204ENST00000492601 TMEM191AQ9H0A3 160 aa10.96□□□□□ -0.65
SGMS1-204ENST00000492601 SRP19P09132 144 aaKnown RBP10.95□□□□□ -0.66
SGMS1-204ENST00000492601 ZNF25P17030 456 aaPredicted RBP10.95□□□□□ -0.66
SGMS1-204ENST00000492601 XCL1P47992 114 aa10.95□□□□□ -0.66
SGMS1-204ENST00000492601 FOXI1Q12951 378 aa10.95□□□□□ -0.66
SGMS1-204ENST00000492601 OR5A1Q8NGJ0 315 aa10.95□□□□□ -0.66
SGMS1-204ENST00000492601 RNF185Q96GF1 192 aa10.95□□□□□ -0.66
SGMS1-204ENST00000492601 OSTCQ9NRP0 149 aa10.95□□□□□ -0.66
SGMS1-204ENST00000492601 ESDP10768 282 aa10.94□□□□□ -0.66
SGMS1-204ENST00000492601 RAB4AP20338 218 aa10.94□□□□□ -0.66
SGMS1-204ENST00000492601 SERTAD4-AS1Q5TG53 156 aa10.94□□□□□ -0.66
SGMS1-204ENST00000492601 AMN1Q8IY45 258 aa10.94□□□□□ -0.66
SGMS1-204ENST00000492601 PRSS3P2Q8NHM4 247 aa10.94□□□□□ -0.66
SGMS1-204ENST00000492601 MRAP2Q96G30 205 aa10.94□□□□□ -0.66
SGMS1-204ENST00000492601 GVQW2A0A096LPI5 108 aaPredicted RBP10.93□□□□□ -0.66
SGMS1-204ENST00000492601 IGKV2-24A0A0C4DH68 120 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms