RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 FUSP35637 526 aaKnown RBP eCLIP7.52□□□□□ -1.21
TMEM39A-211ENST00000491685 FAM104BQ5XKR9 115 aa7.52□□□□□ -1.21
TMEM39A-211ENST00000491685 Q6ZRN7 208 aaPredicted RBP7.52□□□□□ -1.21
TMEM39A-211ENST00000491685 TMEM136Q6ZRR5 245 aa7.52□□□□□ -1.21
TMEM39A-211ENST00000491685 TRAPPC1Q9Y5R8 145 aa7.52□□□□□ -1.21
TMEM39A-211ENST00000491685 SCO1O75880 301 aa7.51□□□□□ -1.21
TMEM39A-211ENST00000491685 APCSP02743 223 aa7.51□□□□□ -1.21
TMEM39A-211ENST00000491685 RPS10P46783 165 aaKnown RBP7.51□□□□□ -1.21
TMEM39A-211ENST00000491685 UBE2D3P61077 147 aa7.51□□□□□ -1.21
TMEM39A-211ENST00000491685 UBE2D2P62837 147 aa7.51□□□□□ -1.21
TMEM39A-211ENST00000491685 OR10J3Q5JRS4 329 aa7.51□□□□□ -1.21
TMEM39A-211ENST00000491685 LELP1Q5T871 98 aa7.51□□□□□ -1.21
TMEM39A-211ENST00000491685 NEXN-AS1Q8NBZ9 246 aa7.51□□□□□ -1.21
TMEM39A-211ENST00000491685 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
TMEM39A-211ENST00000491685 C1orf196B1AJZ1 125 aa7.5□□□□□ -1.21
TMEM39A-211ENST00000491685 K7EMI3 77 aa7.5□□□□□ -1.21
TMEM39A-211ENST00000491685 TCAPO15273 167 aa7.5□□□□□ -1.21
TMEM39A-211ENST00000491685 PMCHP20382 165 aa7.5□□□□□ -1.21
TMEM39A-211ENST00000491685 CKS2P33552 79 aa7.5□□□□□ -1.21
TMEM39A-211ENST00000491685 PKIAP61925 76 aa7.5□□□□□ -1.21
TMEM39A-211ENST00000491685 AMN1Q8IY45 258 aa7.5□□□□□ -1.21
TMEM39A-211ENST00000491685 C10orf126Q8N4M7 172 aa7.5□□□□□ -1.21
TMEM39A-211ENST00000491685 ST20Q9HBF5 79 aa7.5□□□□□ -1.21
TMEM39A-211ENST00000491685 PRSS47A8MTI9 375 aa7.49□□□□□ -1.21
TMEM39A-211ENST00000491685 RPL32P62910 135 aaKnown RBP7.49□□□□□ -1.21
TMEM39A-211ENST00000491685 CDPF1Q6NVV7 123 aa7.49□□□□□ -1.21
TMEM39A-211ENST00000491685 ORMDL3Q8N138 153 aa7.49□□□□□ -1.21
TMEM39A-211ENST00000491685 MRPL18Q9H0U6 180 aaKnown RBP7.49□□□□□ -1.21
TMEM39A-211ENST00000491685 PGPEP1Q9NXJ5 209 aa7.49□□□□□ -1.21
TMEM39A-211ENST00000491685 IGHV3-38A0A0C4DH36 116 aa7.48□□□□□ -1.21
TMEM39A-211ENST00000491685 TMEM262E9PQX1 116 aa7.48□□□□□ -1.21
TMEM39A-211ENST00000491685 I3L3M4 83 aa7.48□□□□□ -1.21
TMEM39A-211ENST00000491685 VCYO14598 125 aa7.48□□□□□ -1.21
TMEM39A-211ENST00000491685 RAB5BP61020 215 aa7.48□□□□□ -1.21
TMEM39A-211ENST00000491685 COTL1Q14019 142 aa7.48□□□□□ -1.21
TMEM39A-211ENST00000491685 RNF185Q96GF1 192 aa7.48□□□□□ -1.21
TMEM39A-211ENST00000491685 C20orf78Q9BR46 151 aa7.48□□□□□ -1.21
TMEM39A-211ENST00000491685 TRBV25-1A0A075B6N4 114 aa7.47□□□□□ -1.21
TMEM39A-211ENST00000491685 TRBV6-8A0A0A6YYG3 113 aa7.47□□□□□ -1.21
TMEM39A-211ENST00000491685 TRAV26-2A0A0B4J265 109 aa7.47□□□□□ -1.21
TMEM39A-211ENST00000491685 TRBV6-5A0A0K0K1A5 114 aa7.47□□□□□ -1.21
TMEM39A-211ENST00000491685 LINC01549A6NIU2 74 aa7.47□□□□□ -1.21
TMEM39A-211ENST00000491685 G0S2P27469 103 aa7.47□□□□□ -1.21
TMEM39A-211ENST00000491685 FABP9Q0Z7S8 132 aa7.47□□□□□ -1.21
TMEM39A-211ENST00000491685 MRPL51Q4U2R6 128 aaKnown RBP7.47□□□□□ -1.21
TMEM39A-211ENST00000491685 Q9UF83 564 aa7.47□□□□□ -1.21
TMEM39A-211ENST00000491685 A0A087WX48 190 aa7.46□□□□□ -1.22
TMEM39A-211ENST00000491685 IGHV1-24A0A0C4DH33 117 aa7.46□□□□□ -1.22
TMEM39A-211ENST00000491685 NCR2O95944 276 aa7.46□□□□□ -1.22
TMEM39A-211ENST00000491685 TRGC2P03986 189 aa7.46□□□□□ -1.22
TMEM39A-211ENST00000491685 DNAH10OSP0CZ25 163 aa7.46□□□□□ -1.22
TMEM39A-211ENST00000491685 LINC00694P0DN24 101 aa7.46□□□□□ -1.22
TMEM39A-211ENST00000491685 Q0VG73 95 aa7.46□□□□□ -1.22
TMEM39A-211ENST00000491685 KIR2DL4Q99706 377 aa7.46□□□□□ -1.22
TMEM39A-211ENST00000491685 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
TMEM39A-211ENST00000491685 UBE2L6O14933 153 aa7.45□□□□□ -1.22
TMEM39A-211ENST00000491685 SMAGPQ0VAQ4 97 aa7.45□□□□□ -1.22
TMEM39A-211ENST00000491685 COA6Q5JTJ3 125 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-211ENST00000491685 WFDC10BQ8IUB3 73 aa7.45□□□□□ -1.22
TMEM39A-211ENST00000491685 CHCHD5Q9BSY4 110 aa7.45□□□□□ -1.22
TMEM39A-211ENST00000491685 ALKBH7Q9BT30 221 aaPredicted RBP7.45□□□□□ -1.22
TMEM39A-211ENST00000491685 NXT2Q9NPJ8 142 aaKnown RBP7.45□□□□□ -1.22
TMEM39A-211ENST00000491685 TNFRSF6BO95407 300 aa7.44□□□□□ -1.22
TMEM39A-211ENST00000491685 FCER1GP30273 86 aa7.44□□□□□ -1.22
TMEM39A-211ENST00000491685 AMTP48728 403 aa7.44□□□□□ -1.22
TMEM39A-211ENST00000491685 SUMO2P61956 95 aaKnown RBP7.44□□□□□ -1.22
TMEM39A-211ENST00000491685 TMEM18Q96B42 140 aa7.44□□□□□ -1.22
TMEM39A-211ENST00000491685 RPL39LQ96EH5 51 aaKnown RBP7.44□□□□□ -1.22
TMEM39A-211ENST00000491685 PRELID3AQ96N28 172 aa7.44□□□□□ -1.22
TMEM39A-211ENST00000491685 CHCHD7Q9BUK0 85 aa7.44□□□□□ -1.22
TMEM39A-211ENST00000491685 FAT1Q14517 4588 aa7.43□□□□□ -1.22
TMEM39A-211ENST00000491685 D6R8Y8 96 aa7.43□□□□□ -1.22
TMEM39A-211ENST00000491685 H7C423 109 aa7.43□□□□□ -1.22
TMEM39A-211ENST00000491685 POLR2KP53803 58 aaKnown RBP7.43□□□□□ -1.22
TMEM39A-211ENST00000491685 IQCJQ1A5X6 159 aa7.43□□□□□ -1.22
TMEM39A-211ENST00000491685 LINC01556Q5JQF7 62 aa7.43□□□□□ -1.22
TMEM39A-211ENST00000491685 PACRGQ96M98 296 aaPredicted RBP7.43□□□□□ -1.22
TMEM39A-211ENST00000491685 TMEM243Q9BU79 118 aa7.43□□□□□ -1.22
TMEM39A-211ENST00000491685 TMEM70Q9BUB7 260 aa7.43□□□□□ -1.22
TMEM39A-211ENST00000491685 TRBV27A0A0K0K1C4 114 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 LINC01546A6NGU7 62 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 SMKR1H3BMG3 65 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 PSCAO43653 123 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST1H2BKO60814 126 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST1H2BJP06899 126 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST1H2BOP23527 126 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST1H2BBP33778 126 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST1H2BDP58876 126 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST1H2BCP62807 126 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST2H2BEQ16778 126 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST1H2BHQ93079 126 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 CHCHD1Q96BP2 118 aaKnown RBP7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST1H2BNQ99877 126 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 HIST1H2BMQ99879 126 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 MAP1LC3AQ9H492 121 aa7.42□□□□□ -1.22
TMEM39A-211ENST00000491685 A0A087WTM6 91 aa7.41□□□□□ -1.22
TMEM39A-211ENST00000491685 IGHV3-30P01768 117 aa7.41□□□□□ -1.22
TMEM39A-211ENST00000491685 IGHV3-33P01772 117 aa7.41□□□□□ -1.22
TMEM39A-211ENST00000491685 IGHV3-30-3P0DP02 117 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms