RNA–Protein interactions for RNA: ENST00000491651.1

SMARCD3-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 4

Gene SMARCD3, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-214ENST00000491651 A0A1B0GUT8 65 aa11.54□□□□□ -0.56
SMARCD3-214ENST00000491651 UBE2L6O14933 153 aa11.54□□□□□ -0.56
SMARCD3-214ENST00000491651 AMTP48728 403 aa11.54□□□□□ -0.56
SMARCD3-214ENST00000491651 ISOC2Q96AB3 205 aa11.54□□□□□ -0.56
SMARCD3-214ENST00000491651 A0A1B0GUV1 79 aa11.53□□□□□ -0.56
SMARCD3-214ENST00000491651 LINC00269Q8N2A0 174 aa11.53□□□□□ -0.56
SMARCD3-214ENST00000491651 NAT8Q9UHE5 227 aa11.53□□□□□ -0.56
SMARCD3-214ENST00000491651 NCR2O95944 276 aa11.52□□□□□ -0.57
SMARCD3-214ENST00000491651 HLA-DQA1P01909 254 aa11.52□□□□□ -0.57
SMARCD3-214ENST00000491651 RPL23P62829 140 aaKnown RBP11.52□□□□□ -0.57
SMARCD3-214ENST00000491651 ADIRFQ15847 76 aa11.52□□□□□ -0.57
SMARCD3-214ENST00000491651 CLPSL2Q6UWE3 100 aa11.52□□□□□ -0.57
SMARCD3-214ENST00000491651 V9GYV3 84 aa11.52□□□□□ -0.57
SMARCD3-214ENST00000491651 EPM2AB3EWF7 344 aa11.51□□□□□ -0.57
SMARCD3-214ENST00000491651 REG3AQ06141 175 aa11.51□□□□□ -0.57
SMARCD3-214ENST00000491651 C20orf203Q8NBC4 194 aa11.51□□□□□ -0.57
SMARCD3-214ENST00000491651 RPL39LQ96EH5 51 aaKnown RBP11.51□□□□□ -0.57
SMARCD3-214ENST00000491651 TMEM191AQ9H0A3 160 aa11.51□□□□□ -0.57
SMARCD3-214ENST00000491651 C9JQL5 133 aa11.5□□□□□ -0.57
SMARCD3-214ENST00000491651 RIGQ13278 110 aa11.5□□□□□ -0.57
SMARCD3-214ENST00000491651 TRAV8-4A0A0B4J246 113 aa11.49□□□□□ -0.57
SMARCD3-214ENST00000491651 SDHAF1A6NFY7 115 aa11.49□□□□□ -0.57
SMARCD3-214ENST00000491651 APCSP02743 223 aa11.49□□□□□ -0.57
SMARCD3-214ENST00000491651 NAT8BQ9UHF3 227 aa11.49□□□□□ -0.57
SMARCD3-214ENST00000491651 IGLV4-60A0A075B6I1 120 aa11.48□□□□□ -0.57
SMARCD3-214ENST00000491651 TRBV6-5A0A0K0K1A5 114 aa11.48□□□□□ -0.57
SMARCD3-214ENST00000491651 SRSF3P84103 164 aaKnown RBP11.48□□□□□ -0.57
SMARCD3-214ENST00000491651 NUP35Q8NFH5 326 aa11.48□□□□□ -0.57
SMARCD3-214ENST00000491651 DEFB104AQ8WTQ1 72 aa11.48□□□□□ -0.57
SMARCD3-214ENST00000491651 MRAP2Q96G30 205 aa11.48□□□□□ -0.57
SMARCD3-214ENST00000491651 USP17L23D6RBM5 183 aa11.47□□□□□ -0.57
SMARCD3-214ENST00000491651 H7C423 109 aa11.46□□□□□ -0.57
SMARCD3-214ENST00000491651 I3L3M4 83 aa11.46□□□□□ -0.57
SMARCD3-214ENST00000491651 AMMECR1LQ6DCA0 310 aa11.46□□□□□ -0.57
SMARCD3-214ENST00000491651 Q6ZSA8 131 aa11.46□□□□□ -0.57
SMARCD3-214ENST00000491651 ST20Q9HBF5 79 aa11.46□□□□□ -0.57
SMARCD3-214ENST00000491651 SMIM27A0A1W2PRY6 76 aa11.45□□□□□ -0.58
SMARCD3-214ENST00000491651 RAB4AP20338 218 aa11.45□□□□□ -0.58
SMARCD3-214ENST00000491651 PMCHP20382 165 aa11.45□□□□□ -0.58
SMARCD3-214ENST00000491651 Q5VSD8 79 aa11.45□□□□□ -0.58
SMARCD3-214ENST00000491651 KRTAP26-1Q6PEX3 210 aa11.45□□□□□ -0.58
SMARCD3-214ENST00000491651 AMN1Q8IY45 258 aa11.45□□□□□ -0.58
SMARCD3-214ENST00000491651 RNF185Q96GF1 192 aa11.45□□□□□ -0.58
SMARCD3-214ENST00000491651 FAM30AQ9NZY2 134 aa11.45□□□□□ -0.58
SMARCD3-214ENST00000491651 IGLV10-54A0A075B6I4 117 aa11.44□□□□□ -0.58
SMARCD3-214ENST00000491651 PPP1R17O96001 155 aa11.44□□□□□ -0.58
SMARCD3-214ENST00000491651 HAMPP81172 84 aa11.44□□□□□ -0.58
SMARCD3-214ENST00000491651 A0A1B0GW15 77 aa11.43□□□□□ -0.58
SMARCD3-214ENST00000491651 ZNF25P17030 456 aaPredicted RBP11.43□□□□□ -0.58
SMARCD3-214ENST00000491651 RAB14P61106 215 aa11.43□□□□□ -0.58
SMARCD3-214ENST00000491651 RNASEKQ6P5S7 137 aaKnown RBP11.43□□□□□ -0.58
SMARCD3-214ENST00000491651 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.42□□□□□ -0.58
SMARCD3-214ENST00000491651 IGKV2-29A2NJV5 120 aaPredicted RBP11.42□□□□□ -0.58
SMARCD3-214ENST00000491651 FAM229AH3BQW9 127 aa11.42□□□□□ -0.58
SMARCD3-214ENST00000491651 GAS8-AS1O95177 125 aa11.42□□□□□ -0.58
SMARCD3-214ENST00000491651 SMR3BP02814 79 aaPredicted RBP11.42□□□□□ -0.58
SMARCD3-214ENST00000491651 CLRN3Q8NCR9 226 aa11.42□□□□□ -0.58
SMARCD3-214ENST00000491651 TRBV27A0A0K0K1C4 114 aa11.41□□□□□ -0.58
SMARCD3-214ENST00000491651 FGF6P10767 208 aa11.41□□□□□ -0.58
SMARCD3-214ENST00000491651 RPS10P46783 165 aaKnown RBP11.41□□□□□ -0.58
SMARCD3-214ENST00000491651 LINC01620Q4KN68 170 aa11.41□□□□□ -0.58
SMARCD3-214ENST00000491651 DGAT2L7PQ6IED9 249 aa11.41□□□□□ -0.58
SMARCD3-214ENST00000491651 BTF3L4Q96K17 158 aa11.41□□□□□ -0.58
SMARCD3-214ENST00000491651 TMEM242Q9NWH2 141 aa11.41□□□□□ -0.58
SMARCD3-214ENST00000491651 TSHBP01222 138 aa11.4□□□□□ -0.58
SMARCD3-214ENST00000491651 S100A8P05109 93 aa11.4□□□□□ -0.58
SMARCD3-214ENST00000491651 PRSS1P07477 247 aa11.4□□□□□ -0.58
SMARCD3-214ENST00000491651 POLR2KP53803 58 aaKnown RBP11.4□□□□□ -0.58
SMARCD3-214ENST00000491651 PPP1R2P9O14990 202 aa11.39□□□□□ -0.59
SMARCD3-214ENST00000491651 ESDP10768 282 aa11.39□□□□□ -0.59
SMARCD3-214ENST00000491651 FAM104BQ5XKR9 115 aa11.39□□□□□ -0.59
SMARCD3-214ENST00000491651 TMEM101Q96IK0 257 aa11.39□□□□□ -0.59
SMARCD3-214ENST00000491651 IGKV3OR2-268A0A0C4DH90 116 aa11.38□□□□□ -0.59
SMARCD3-214ENST00000491651 C7orf77A4D0Y5 90 aa11.38□□□□□ -0.59
SMARCD3-214ENST00000491651 SMKR1H3BMG3 65 aa11.38□□□□□ -0.59
SMARCD3-214ENST00000491651 CAMPP49913 170 aa11.38□□□□□ -0.59
SMARCD3-214ENST00000491651 DNAH8Q96JB1 4490 aa11.38□□□□□ -0.59
SMARCD3-214ENST00000491651 FAT1Q14517 4588 aa11.38□□□□□ -0.59
SMARCD3-214ENST00000491651 LINC00862A6NCI5 91 aa11.37□□□□□ -0.59
SMARCD3-214ENST00000491651 VCYO14598 125 aa11.37□□□□□ -0.59
SMARCD3-214ENST00000491651 SUMO2P61956 95 aaKnown RBP11.37□□□□□ -0.59
SMARCD3-214ENST00000491651 HBBP68871 147 aa11.37□□□□□ -0.59
SMARCD3-214ENST00000491651 PNRC1Q12796 327 aaPredicted RBP11.37□□□□□ -0.59
SMARCD3-214ENST00000491651 MRPL51Q4U2R6 128 aaKnown RBP11.37□□□□□ -0.59
SMARCD3-214ENST00000491651 NRACQ8N912 160 aa11.37□□□□□ -0.59
SMARCD3-214ENST00000491651 hDV102S1A0JD36 115 aa11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 F8W036 122 aa11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 INAFM2P0DMQ5 153 aa11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 FCER1GP30273 86 aa11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 SMAGPQ0VAQ4 97 aa11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 MRPL54Q6P161 138 aaKnown RBP11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 SCXQ7RTU7 201 aa11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 MRPL52Q86TS9 123 aaKnown RBP11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 OR5A1Q8NGJ0 315 aa11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 KIR2DL4Q99706 377 aa11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 CHAC1Q9BUX1 264 aa11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 AP5S1Q9NUS5 200 aa11.36□□□□□ -0.59
SMARCD3-214ENST00000491651 GAGE12HA6NDE8 117 aa11.35□□□□□ -0.59
SMARCD3-214ENST00000491651 CFAP161Q6P656 301 aa11.35□□□□□ -0.59
SMARCD3-214ENST00000491651 C9orf163Q8N9P6 203 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms