RNA–Protein interactions for RNA: ENST00000491494.1

PSMD2-218, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-218	ENST00000491494	RPL39L	Q96EH5	51 aa	Known RBP	11.21	□□□□□ -0.61
PSMD2-218	ENST00000491494	CT83	Q5H943	113 aa		11.2	□□□□□ -0.62
PSMD2-218	ENST00000491494	FAM30A	Q9NZY2	134 aa		11.2	□□□□□ -0.62
PSMD2-218	ENST00000491494	HIGD1C	A8MV81	97 aa		11.19	□□□□□ -0.62
PSMD2-218	ENST00000491494	USP17L23	D6RBM5	183 aa		11.19	□□□□□ -0.62
PSMD2-218	ENST00000491494	REG3A	Q06141	175 aa		11.19	□□□□□ -0.62
PSMD2-218	ENST00000491494	ADIRF	Q15847	76 aa		11.19	□□□□□ -0.62
PSMD2-218	ENST00000491494	TMEM241	Q24JQ0	296 aa		11.19	□□□□□ -0.62
PSMD2-218	ENST00000491494	TEX261	Q6UWH6	196 aa		11.19	□□□□□ -0.62
PSMD2-218	ENST00000491494	TSKU	Q8WUA8	353 aa		11.19	□□□□□ -0.62
PSMD2-218	ENST00000491494	OSTC	Q9NRP0	149 aa		11.19	□□□□□ -0.62
PSMD2-218	ENST00000491494	IGKV3OR2-268	A0A0C4DH90	116 aa		11.18	□□□□□ -0.62
PSMD2-218	ENST00000491494		A0A1B0GUT8	65 aa		11.18	□□□□□ -0.62
PSMD2-218	ENST00000491494	INAFM2	P0DMQ5	153 aa		11.18	□□□□□ -0.62
PSMD2-218	ENST00000491494	PMCH	P20382	165 aa		11.18	□□□□□ -0.62
PSMD2-218	ENST00000491494	PEA15	Q15121	130 aa		11.18	□□□□□ -0.62
PSMD2-218	ENST00000491494	AMMECR1L	Q6DCA0	310 aa		11.18	□□□□□ -0.62
PSMD2-218	ENST00000491494	IGLV4-60	A0A075B6I1	120 aa		11.17	□□□□□ -0.62
PSMD2-218	ENST00000491494	NDUFS6	O75380	124 aa	Known RBP	11.17	□□□□□ -0.62
PSMD2-218	ENST00000491494	APCS	P02743	223 aa		11.17	□□□□□ -0.62
PSMD2-218	ENST00000491494	RNASEK	Q6P5S7	137 aa	Known RBP	11.17	□□□□□ -0.62
PSMD2-218	ENST00000491494	FAM74A3	Q4VXF1	159 aa		11.16	□□□□□ -0.62
PSMD2-218	ENST00000491494	C20orf203	Q8NBC4	194 aa		11.16	□□□□□ -0.62
PSMD2-218	ENST00000491494	GFRA4	Q9GZZ7	299 aa		11.16	□□□□□ -0.62
PSMD2-218	ENST00000491494	PRR34	Q9NV39	138 aa		11.16	□□□□□ -0.62
PSMD2-218	ENST00000491494	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD2-218	ENST00000491494	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.15	□□□□□ -0.62
PSMD2-218	ENST00000491494	SDHAF1	A6NFY7	115 aa		11.15	□□□□□ -0.62
PSMD2-218	ENST00000491494	RIG	Q13278	110 aa		11.15	□□□□□ -0.62
PSMD2-218	ENST00000491494		A0A1B0GUV1	79 aa		11.14	□□□□□ -0.63
PSMD2-218	ENST00000491494	RPL23	P62829	140 aa	Known RBP	11.14	□□□□□ -0.63
PSMD2-218	ENST00000491494	ISOC2	Q96AB3	205 aa		11.14	□□□□□ -0.63
PSMD2-218	ENST00000491494	ST20	Q9HBF5	79 aa		11.14	□□□□□ -0.63
PSMD2-218	ENST00000491494	NAT8	Q9UHE5	227 aa		11.14	□□□□□ -0.63
PSMD2-218	ENST00000491494	TRAV8-4	A0A0B4J246	113 aa		11.13	□□□□□ -0.63
PSMD2-218	ENST00000491494		V9GYV3	84 aa		11.13	□□□□□ -0.63
PSMD2-218	ENST00000491494	FAM231B	A6NCW3	169 aa		11.12	□□□□□ -0.63
PSMD2-218	ENST00000491494		C9JQL5	133 aa		11.12	□□□□□ -0.63
PSMD2-218	ENST00000491494		I3L3M4	83 aa		11.12	□□□□□ -0.63
PSMD2-218	ENST00000491494	NCR2	O95944	276 aa		11.12	□□□□□ -0.63
PSMD2-218	ENST00000491494	SRSF3	P84103	164 aa	Known RBP	11.12	□□□□□ -0.63
PSMD2-218	ENST00000491494	AMN1	Q8IY45	258 aa		11.12	□□□□□ -0.63
PSMD2-218	ENST00000491494	NUP35	Q8NFH5	326 aa		11.12	□□□□□ -0.63
PSMD2-218	ENST00000491494	TMEM191A	Q9H0A3	160 aa		11.12	□□□□□ -0.63
PSMD2-218	ENST00000491494	hDV102S1	A0JD36	115 aa		11.11	□□□□□ -0.63
PSMD2-218	ENST00000491494	PRSS1	P07477	247 aa		11.11	□□□□□ -0.63
PSMD2-218	ENST00000491494	TMEM101	Q96IK0	257 aa		11.11	□□□□□ -0.63
PSMD2-218	ENST00000491494	BTF3L4	Q96K17	158 aa		11.11	□□□□□ -0.63
PSMD2-218	ENST00000491494	TMEM242	Q9NWH2	141 aa		11.11	□□□□□ -0.63
PSMD2-218	ENST00000491494	NAT8B	Q9UHF3	227 aa		11.11	□□□□□ -0.63
PSMD2-218	ENST00000491494	SMKR1	H3BMG3	65 aa		11.1	□□□□□ -0.63
PSMD2-218	ENST00000491494	GAS8-AS1	O95177	125 aa		11.1	□□□□□ -0.63
PSMD2-218	ENST00000491494	MRAP2	Q96G30	205 aa		11.1	□□□□□ -0.63
PSMD2-218	ENST00000491494	AP5S1	Q9NUS5	200 aa		11.1	□□□□□ -0.63
PSMD2-218	ENST00000491494	GAGE12H	A6NDE8	117 aa		11.09	□□□□□ -0.63
PSMD2-218	ENST00000491494	FGF6	P10767	208 aa		11.09	□□□□□ -0.63
PSMD2-218	ENST00000491494	RAB4A	P20338	218 aa		11.09	□□□□□ -0.63
PSMD2-218	ENST00000491494	CAMP	P49913	170 aa		11.09	□□□□□ -0.63
PSMD2-218	ENST00000491494		Q6ZSA8	131 aa		11.09	□□□□□ -0.63
PSMD2-218	ENST00000491494	SCX	Q7RTU7	201 aa		11.09	□□□□□ -0.63
PSMD2-218	ENST00000491494	LINC00528	Q8N1L1	170 aa		11.09	□□□□□ -0.63
PSMD2-218	ENST00000491494	TRBV6-5	A0A0K0K1A5	114 aa		11.08	□□□□□ -0.64
PSMD2-218	ENST00000491494	PLA2G1B	P04054	148 aa	Known RBP	11.08	□□□□□ -0.64
PSMD2-218	ENST00000491494	FCER1G	P30273	86 aa		11.08	□□□□□ -0.64
PSMD2-218	ENST00000491494	KRTAP26-1	Q6PEX3	210 aa		11.08	□□□□□ -0.64
PSMD2-218	ENST00000491494	CLRN3	Q8NCR9	226 aa		11.08	□□□□□ -0.64
PSMD2-218	ENST00000491494	RNF185	Q96GF1	192 aa		11.08	□□□□□ -0.64
PSMD2-218	ENST00000491494		H7C423	109 aa		11.07	□□□□□ -0.64
PSMD2-218	ENST00000491494	RPS10	P46783	165 aa	Known RBP	11.07	□□□□□ -0.64
PSMD2-218	ENST00000491494	RAB14	P61106	215 aa		11.07	□□□□□ -0.64
PSMD2-218	ENST00000491494	DGAT2L7P	Q6IED9	249 aa		11.07	□□□□□ -0.64
PSMD2-218	ENST00000491494	CHAC1	Q9BUX1	264 aa		11.07	□□□□□ -0.64
PSMD2-218	ENST00000491494	SMDT1	Q9H4I9	107 aa		11.07	□□□□□ -0.64
PSMD2-218	ENST00000491494	TSHB	P01222	138 aa		11.06	□□□□□ -0.64
PSMD2-218	ENST00000491494	OR5A1	Q8NGJ0	315 aa		11.06	□□□□□ -0.64
PSMD2-218	ENST00000491494	FAT1	Q14517	4588 aa		11.06	□□□□□ -0.64
PSMD2-218	ENST00000491494	DNAH8	Q96JB1	4490 aa		11.05	□□□□□ -0.64
PSMD2-218	ENST00000491494	PPP1R17	O96001	155 aa		11.05	□□□□□ -0.64
PSMD2-218	ENST00000491494	MRPL54	Q6P161	138 aa	Known RBP	11.05	□□□□□ -0.64
PSMD2-218	ENST00000491494	CFAP161	Q6P656	301 aa		11.05	□□□□□ -0.64
PSMD2-218	ENST00000491494	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.05	□□□□□ -0.64
PSMD2-218	ENST00000491494	DPH3	Q96FX2	82 aa		11.05	□□□□□ -0.64
PSMD2-218	ENST00000491494	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.04	□□□□□ -0.64
PSMD2-218	ENST00000491494	VCY	O14598	125 aa		11.04	□□□□□ -0.64
PSMD2-218	ENST00000491494	ZNF25	P17030	456 aa	Predicted RBP	11.04	□□□□□ -0.64
PSMD2-218	ENST00000491494	CIRBP-AS1	Q8TBR5	109 aa		11.04	□□□□□ -0.64
PSMD2-218	ENST00000491494	SMIM27	A0A1W2PRY6	76 aa		11.03	□□□□□ -0.64
PSMD2-218	ENST00000491494	C7orf77	A4D0Y5	90 aa		11.03	□□□□□ -0.64
PSMD2-218	ENST00000491494	CKS2	P33552	79 aa		11.03	□□□□□ -0.64
PSMD2-218	ENST00000491494	HIGD2B	Q4VC39	106 aa		11.03	□□□□□ -0.64
PSMD2-218	ENST00000491494	C9orf163	Q8N9P6	203 aa		11.03	□□□□□ -0.64
PSMD2-218	ENST00000491494	VPS13B	Q7Z7G8	4022 aa		11.03	□□□□□ -0.64
PSMD2-218	ENST00000491494		A0A1B0GW15	77 aa		11.02	□□□□□ -0.65
PSMD2-218	ENST00000491494	S100A8	P05109	93 aa		11.02	□□□□□ -0.65
PSMD2-218	ENST00000491494	XCL1	P47992	114 aa		11.02	□□□□□ -0.65
PSMD2-218	ENST00000491494	POLR2K	P53803	58 aa	Known RBP	11.02	□□□□□ -0.65
PSMD2-218	ENST00000491494	SUMO2	P61956	95 aa	Known RBP	11.02	□□□□□ -0.65
PSMD2-218	ENST00000491494	MRPL51	Q4U2R6	128 aa	Known RBP	11.02	□□□□□ -0.65
PSMD2-218	ENST00000491494	FAM104B	Q5XKR9	115 aa		11.02	□□□□□ -0.65
PSMD2-218	ENST00000491494	KIR2DL4	Q99706	377 aa		11.02	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms