RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 NUDT10Q8NFP7 164 aa10.07□□□□□ -0.8
SMPD4-220ENST00000491319 NUDT11Q96G61 164 aa10.07□□□□□ -0.8
SMPD4-220ENST00000491319 BIN3Q9NQY0 253 aa10.07□□□□□ -0.8
SMPD4-220ENST00000491319 TRAV8-4A0A0B4J246 113 aa10.06□□□□□ -0.8
SMPD4-220ENST00000491319 UBE2L6O14933 153 aa10.06□□□□□ -0.8
SMPD4-220ENST00000491319 AMTP48728 403 aa10.06□□□□□ -0.8
SMPD4-220ENST00000491319 CNBPP62633 177 aaKnown RBP10.06□□□□□ -0.8
SMPD4-220ENST00000491319 C9orf62Q8N4C0 152 aa10.06□□□□□ -0.8
SMPD4-220ENST00000491319 TRAV26-2A0A0B4J265 109 aa10.05□□□□□ -0.8
SMPD4-220ENST00000491319 COTL1Q14019 142 aa10.05□□□□□ -0.8
SMPD4-220ENST00000491319 TWIST1Q15672 202 aa10.05□□□□□ -0.8
SMPD4-220ENST00000491319 CNFNQ9BYD5 112 aa10.05□□□□□ -0.8
SMPD4-220ENST00000491319 RNASE7Q9H1E1 156 aaKnown RBP10.05□□□□□ -0.8
SMPD4-220ENST00000491319 K7EN84 100 aa10.04□□□□□ -0.8
SMPD4-220ENST00000491319 SLPIP03973 132 aa10.04□□□□□ -0.8
SMPD4-220ENST00000491319 WDR73Q6P4I2 378 aa10.04□□□□□ -0.8
SMPD4-220ENST00000491319 TCTE3Q8IZS6 198 aa10.04□□□□□ -0.8
SMPD4-220ENST00000491319 GATD1Q8NB37 220 aa10.04□□□□□ -0.8
SMPD4-220ENST00000491319 RPP21Q9H633 154 aaKnown RBP10.04□□□□□ -0.8
SMPD4-220ENST00000491319 CIRBPQ14011 172 aaKnown RBP10.03□□□□□ -0.8
SMPD4-220ENST00000491319 SERTAD4-AS1Q5TG53 156 aa10.03□□□□□ -0.8
SMPD4-220ENST00000491319 SLC51BQ86UW2 128 aa10.03□□□□□ -0.8
SMPD4-220ENST00000491319 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
SMPD4-220ENST00000491319 CHTF8P0CG12 524 aa10.02□□□□□ -0.81
SMPD4-220ENST00000491319 OCC1Q8TAD7 63 aa10.02□□□□□ -0.81
SMPD4-220ENST00000491319 RPL39LQ96EH5 51 aaKnown RBP10.02□□□□□ -0.81
SMPD4-220ENST00000491319 AP5S1Q9NUS5 200 aa10.02□□□□□ -0.81
SMPD4-220ENST00000491319 IGHV3-64A0A075B6Q5 118 aa10.01□□□□□ -0.81
SMPD4-220ENST00000491319 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.01□□□□□ -0.81
SMPD4-220ENST00000491319 TAGLN2P37802 199 aaKnown RBP10.01□□□□□ -0.81
SMPD4-220ENST00000491319 Q6ZNX1 250 aa10.01□□□□□ -0.81
SMPD4-220ENST00000491319 C15orf56Q8N910 161 aa10.01□□□□□ -0.81
SMPD4-220ENST00000491319 GTSF1Q8WW33 167 aa10.01□□□□□ -0.81
SMPD4-220ENST00000491319 GAGE12HA6NDE8 117 aa10□□□□□ -0.81
SMPD4-220ENST00000491319 FOXA3P55318 350 aaPredicted RBP10□□□□□ -0.81
SMPD4-220ENST00000491319 SPACA4Q8TDM5 124 aa9.99□□□□□ -0.81
SMPD4-220ENST00000491319 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.98□□□□□ -0.81
SMPD4-220ENST00000491319 A0A087WYN8 130 aa9.98□□□□□ -0.81
SMPD4-220ENST00000491319 IGKV2-29A2NJV5 120 aaPredicted RBP9.98□□□□□ -0.81
SMPD4-220ENST00000491319 HIGD2BQ4VC39 106 aa9.98□□□□□ -0.81
SMPD4-220ENST00000491319 AMMECR1LQ6DCA0 310 aa9.98□□□□□ -0.81
SMPD4-220ENST00000491319 HMCN2Q8NDA2 5059 aa9.97□□□□□ -0.81
SMPD4-220ENST00000491319 NCR2O95944 276 aa9.97□□□□□ -0.81
SMPD4-220ENST00000491319 APCSP02743 223 aa9.97□□□□□ -0.81
SMPD4-220ENST00000491319 RNASEKQ6P5S7 137 aaKnown RBP9.97□□□□□ -0.81
SMPD4-220ENST00000491319 CHCHD10Q8WYQ3 142 aaPredicted RBP9.97□□□□□ -0.81
SMPD4-220ENST00000491319 DPH3Q96FX2 82 aa9.97□□□□□ -0.81
SMPD4-220ENST00000491319 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
SMPD4-220ENST00000491319 SDHAF1A6NFY7 115 aa9.96□□□□□ -0.82
SMPD4-220ENST00000491319 GATCO43716 136 aaKnown RBP9.96□□□□□ -0.82
SMPD4-220ENST00000491319 SMIM15Q7Z3B0 74 aa9.96□□□□□ -0.82
SMPD4-220ENST00000491319 RNF185Q96GF1 192 aa9.96□□□□□ -0.82
SMPD4-220ENST00000491319 TMEM250H0YL14 139 aa9.95□□□□□ -0.82
SMPD4-220ENST00000491319 MT1HL1P0DM35 61 aa9.95□□□□□ -0.82
SMPD4-220ENST00000491319 FGF6P10767 208 aa9.95□□□□□ -0.82
SMPD4-220ENST00000491319 CFAP161Q6P656 301 aa9.95□□□□□ -0.82
SMPD4-220ENST00000491319 ALKAL2Q6UX46 152 aa9.95□□□□□ -0.82
SMPD4-220ENST00000491319 H7C423 109 aa9.94□□□□□ -0.82
SMPD4-220ENST00000491319 GAS8-AS1O95177 125 aa9.94□□□□□ -0.82
SMPD4-220ENST00000491319 RPS10P46783 165 aaKnown RBP9.94□□□□□ -0.82
SMPD4-220ENST00000491319 COX6A2Q02221 97 aa9.94□□□□□ -0.82
SMPD4-220ENST00000491319 TEX261Q6UWH6 196 aa9.94□□□□□ -0.82
SMPD4-220ENST00000491319 FAM231DQ6ZW35 169 aa9.94□□□□□ -0.82
SMPD4-220ENST00000491319 PLAC8Q9NZF1 115 aa9.94□□□□□ -0.82
SMPD4-220ENST00000491319 GVQW2A0A096LPI5 108 aaPredicted RBP9.93□□□□□ -0.82
SMPD4-220ENST00000491319 FAM231BA6NCW3 169 aa9.93□□□□□ -0.82
SMPD4-220ENST00000491319 A8MWL6 223 aa9.93□□□□□ -0.82
SMPD4-220ENST00000491319 CEBPGP53567 150 aa9.93□□□□□ -0.82
SMPD4-220ENST00000491319 Q6ZRU5 148 aa9.93□□□□□ -0.82
SMPD4-220ENST00000491319 PRSS3P2Q8NHM4 247 aa9.93□□□□□ -0.82
SMPD4-220ENST00000491319 IGKV2-24A0A0C4DH68 120 aa9.92□□□□□ -0.82
SMPD4-220ENST00000491319 I3L3M4 83 aa9.92□□□□□ -0.82
SMPD4-220ENST00000491319 PHOX2AO14813 284 aa9.92□□□□□ -0.82
SMPD4-220ENST00000491319 NDUFS6O75380 124 aaKnown RBP9.92□□□□□ -0.82
SMPD4-220ENST00000491319 BLOC1S1P78537 153 aa9.92□□□□□ -0.82
SMPD4-220ENST00000491319 FOXI1Q12951 378 aa9.92□□□□□ -0.82
SMPD4-220ENST00000491319 TRBV6-5A0A0K0K1A5 114 aa9.91□□□□□ -0.82
SMPD4-220ENST00000491319 TSHBP01222 138 aa9.91□□□□□ -0.82
SMPD4-220ENST00000491319 ZNF25P17030 456 aaPredicted RBP9.91□□□□□ -0.82
SMPD4-220ENST00000491319 PMCHP20382 165 aa9.91□□□□□ -0.82
SMPD4-220ENST00000491319 MAJINQ3KP22 176 aa9.91□□□□□ -0.82
SMPD4-220ENST00000491319 CT83Q5H943 113 aa9.91□□□□□ -0.82
SMPD4-220ENST00000491319 OR5A1Q8NGJ0 315 aa9.91□□□□□ -0.82
SMPD4-220ENST00000491319 LYPD6BQ8NI32 183 aa9.91□□□□□ -0.82
SMPD4-220ENST00000491319 TMEM242Q9NWH2 141 aa9.91□□□□□ -0.82
SMPD4-220ENST00000491319 XCL1P47992 114 aa9.9□□□□□ -0.82
SMPD4-220ENST00000491319 AKAP14Q86UN6 197 aa9.9□□□□□ -0.82
SMPD4-220ENST00000491319 A0A096LNI7 61 aa9.89□□□□□ -0.83
SMPD4-220ENST00000491319 HIGD1CA8MV81 97 aa9.89□□□□□ -0.83
SMPD4-220ENST00000491319 CCL25O15444 150 aa9.89□□□□□ -0.83
SMPD4-220ENST00000491319 ESDP10768 282 aa9.89□□□□□ -0.83
SMPD4-220ENST00000491319 C7orf33Q8WU49 177 aa9.89□□□□□ -0.83
SMPD4-220ENST00000491319 BORCS7Q96B45 105 aa9.89□□□□□ -0.83
SMPD4-220ENST00000491319 LINC00526Q96FQ7 95 aa9.89□□□□□ -0.83
SMPD4-220ENST00000491319 BTF3L4Q96K17 158 aa9.89□□□□□ -0.83
SMPD4-220ENST00000491319 SMIM7Q9BQ49 75 aa9.89□□□□□ -0.83
SMPD4-220ENST00000491319 ST20Q9HBF5 79 aa9.89□□□□□ -0.83
SMPD4-220ENST00000491319 hCG_2014768A0A024R1R8 64 aa9.88□□□□□ -0.83
SMPD4-220ENST00000491319 LINC00959A0A1B0GUT2 108 aa9.88□□□□□ -0.83
SMPD4-220ENST00000491319 A0A1B0GUT8 65 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms