RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 BAGE2Q86Y30 109 aa9.53□□□□□ -0.88
SCAMP3-208ENST00000490999 MLST8Q9BVC4 326 aa9.53□□□□□ -0.88
SCAMP3-208ENST00000490999 A0A096LNI7 61 aa9.52□□□□□ -0.89
SCAMP3-208ENST00000490999 TRAV8-4A0A0B4J246 113 aa9.52□□□□□ -0.89
SCAMP3-208ENST00000490999 NDUFS6O75380 124 aaKnown RBP9.52□□□□□ -0.89
SCAMP3-208ENST00000490999 P01737 135 aa9.52□□□□□ -0.89
SCAMP3-208ENST00000490999 CXCL1P09341 107 aa9.52□□□□□ -0.89
SCAMP3-208ENST00000490999 SPINK6Q6UWN8 80 aa9.52□□□□□ -0.89
SCAMP3-208ENST00000490999 GAGE12HA6NDE8 117 aa9.51□□□□□ -0.89
SCAMP3-208ENST00000490999 CCL20P78556 96 aa9.51□□□□□ -0.89
SCAMP3-208ENST00000490999 C11orf52Q96A22 123 aa9.51□□□□□ -0.89
SCAMP3-208ENST00000490999 GNG13Q9P2W3 67 aa9.51□□□□□ -0.89
SCAMP3-208ENST00000490999 IGKV3OR2-268A0A0C4DH90 116 aa9.5□□□□□ -0.89
SCAMP3-208ENST00000490999 IFNA1P01562 189 aa9.5□□□□□ -0.89
SCAMP3-208ENST00000490999 TAGLN2P37802 199 aaKnown RBP9.5□□□□□ -0.89
SCAMP3-208ENST00000490999 RPS10P46783 165 aaKnown RBP9.5□□□□□ -0.89
SCAMP3-208ENST00000490999 SPANXN1Q5VSR9 72 aa9.5□□□□□ -0.89
SCAMP3-208ENST00000490999 PDE6DO43924 150 aa9.49□□□□□ -0.89
SCAMP3-208ENST00000490999 MGPP08493 103 aa9.49□□□□□ -0.89
SCAMP3-208ENST00000490999 RPL35P42766 123 aaKnown RBP9.49□□□□□ -0.89
SCAMP3-208ENST00000490999 SMIM12Q96EX1 92 aa9.49□□□□□ -0.89
SCAMP3-208ENST00000490999 TMEM243Q9BU79 118 aa9.49□□□□□ -0.89
SCAMP3-208ENST00000490999 SNAI2O43623 268 aa9.48□□□□□ -0.89
SCAMP3-208ENST00000490999 SMIM17P0DL12 118 aa9.48□□□□□ -0.89
SCAMP3-208ENST00000490999 NKX2-5P52952 324 aaPredicted RBP9.48□□□□□ -0.89
SCAMP3-208ENST00000490999 MEF2BQ02080 365 aaPredicted RBP9.48□□□□□ -0.89
SCAMP3-208ENST00000490999 AP1S3Q96PC3 154 aa9.48□□□□□ -0.89
SCAMP3-208ENST00000490999 SRSF9Q13242 221 aaKnown RBP eCLIP9.47□□□□□ -0.89
SCAMP3-208ENST00000490999 C9orf62Q8N4C0 152 aa9.47□□□□□ -0.89
SCAMP3-208ENST00000490999 M0QY20 66 aa9.46□□□□□ -0.9
SCAMP3-208ENST00000490999 OR5AL1P0C617 328 aa9.46□□□□□ -0.9
SCAMP3-208ENST00000490999 SUMO4Q6EEV6 95 aa9.46□□□□□ -0.9
SCAMP3-208ENST00000490999 SSBP4Q9BWG4 385 aaPredicted RBP9.46□□□□□ -0.9
SCAMP3-208ENST00000490999 BIN3Q9NQY0 253 aa9.46□□□□□ -0.9
SCAMP3-208ENST00000490999 hCG_2014768A0A024R1R8 64 aa9.45□□□□□ -0.9
SCAMP3-208ENST00000490999 A0A1B0GUV1 79 aa9.45□□□□□ -0.9
SCAMP3-208ENST00000490999 H7C1H1 209 aa9.45□□□□□ -0.9
SCAMP3-208ENST00000490999 GZMBP10144 247 aa9.45□□□□□ -0.9
SCAMP3-208ENST00000490999 BCL2P10415 239 aa9.45□□□□□ -0.9
SCAMP3-208ENST00000490999 BLOC1S1P78537 153 aa9.45□□□□□ -0.9
SCAMP3-208ENST00000490999 UBE2L6O14933 153 aa9.44□□□□□ -0.9
SCAMP3-208ENST00000490999 GNG4P50150 75 aa9.44□□□□□ -0.9
SCAMP3-208ENST00000490999 RPS20P60866 119 aaKnown RBP9.44□□□□□ -0.9
SCAMP3-208ENST00000490999 CENPWQ5EE01 88 aa9.44□□□□□ -0.9
SCAMP3-208ENST00000490999 CFAP161Q6P656 301 aa9.44□□□□□ -0.9
SCAMP3-208ENST00000490999 Q6ZRP5 223 aa9.44□□□□□ -0.9
SCAMP3-208ENST00000490999 LINC00526Q96FQ7 95 aa9.44□□□□□ -0.9
SCAMP3-208ENST00000490999 TPPP3Q9BW30 176 aa9.44□□□□□ -0.9
SCAMP3-208ENST00000490999 MED9Q9NWA0 146 aa9.44□□□□□ -0.9
SCAMP3-208ENST00000490999 GVQW2A0A096LPI5 108 aaPredicted RBP9.43□□□□□ -0.9
SCAMP3-208ENST00000490999 CHCHD10Q8WYQ3 142 aaPredicted RBP9.43□□□□□ -0.9
SCAMP3-208ENST00000490999 XKRY2A2RUG3 117 aa9.42□□□□□ -0.9
SCAMP3-208ENST00000490999 C19orf71A6NCJ1 209 aa9.42□□□□□ -0.9
SCAMP3-208ENST00000490999 AMTP48728 403 aa9.42□□□□□ -0.9
SCAMP3-208ENST00000490999 RAB19A4D1S5 217 aa9.41□□□□□ -0.9
SCAMP3-208ENST00000490999 ALKAL2Q6UX46 152 aa9.4□□□□□ -0.9
SCAMP3-208ENST00000490999 OR2D3Q8NGH3 330 aa9.4□□□□□ -0.9
SCAMP3-208ENST00000490999 FAM231BA6NCW3 169 aa9.39□□□□□ -0.91
SCAMP3-208ENST00000490999 F2Z2F3 143 aa9.39□□□□□ -0.91
SCAMP3-208ENST00000490999 TMEM250H0YL14 139 aa9.39□□□□□ -0.91
SCAMP3-208ENST00000490999 IGLC6P0CF74 106 aa9.39□□□□□ -0.91
SCAMP3-208ENST00000490999 RASL11AQ6T310 242 aa9.39□□□□□ -0.91
SCAMP3-208ENST00000490999 PGLYRP4Q96LB8 373 aa9.39□□□□□ -0.91
SCAMP3-208ENST00000490999 CARD19Q96LW7 228 aa9.39□□□□□ -0.91
SCAMP3-208ENST00000490999 LINC00474Q9P2X8 69 aa9.39□□□□□ -0.91
SCAMP3-208ENST00000490999 TRBV20OR9-2A0A075B6H5 130 aa9.38□□□□□ -0.91
SCAMP3-208ENST00000490999 CACNG7P62955 275 aa9.38□□□□□ -0.91
SCAMP3-208ENST00000490999 FOXI1Q12951 378 aa9.38□□□□□ -0.91
SCAMP3-208ENST00000490999 COTL1Q14019 142 aa9.38□□□□□ -0.91
SCAMP3-208ENST00000490999 PRR26Q8N8Z3 221 aa9.38□□□□□ -0.91
SCAMP3-208ENST00000490999 FER1L6-AS1Q8NA97 138 aa9.38□□□□□ -0.91
SCAMP3-208ENST00000490999 KRTAP9-6A0A140TA67 174 aa9.37□□□□□ -0.91
SCAMP3-208ENST00000490999 XCL1P47992 114 aa9.37□□□□□ -0.91
SCAMP3-208ENST00000490999 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.36□□□□□ -0.91
SCAMP3-208ENST00000490999 IGKV2-29A2NJV5 120 aaPredicted RBP9.36□□□□□ -0.91
SCAMP3-208ENST00000490999 AMMECR1LQ6DCA0 310 aa9.36□□□□□ -0.91
SCAMP3-208ENST00000490999 RNASEKQ6P5S7 137 aaKnown RBP9.36□□□□□ -0.91
SCAMP3-208ENST00000490999 NUDT10Q8NFP7 164 aa9.36□□□□□ -0.91
SCAMP3-208ENST00000490999 NUDT11Q96G61 164 aa9.36□□□□□ -0.91
SCAMP3-208ENST00000490999 A0A1B0GVG6 124 aa9.35□□□□□ -0.91
SCAMP3-208ENST00000490999 GAGE2BQ13066 116 aa9.35□□□□□ -0.91
SCAMP3-208ENST00000490999 OCC1Q8TAD7 63 aa9.35□□□□□ -0.91
SCAMP3-208ENST00000490999 NIT2Q9NQR4 276 aa9.35□□□□□ -0.91
SCAMP3-208ENST00000490999 PSORS1C2Q9UIG4 136 aa9.35□□□□□ -0.91
SCAMP3-208ENST00000490999 TRAV26-2A0A0B4J265 109 aa9.34□□□□□ -0.91
SCAMP3-208ENST00000490999 TRGC1P0CF51 173 aa9.34□□□□□ -0.91
SCAMP3-208ENST00000490999 PTTG1IPP53801 180 aa9.34□□□□□ -0.91
SCAMP3-208ENST00000490999 A0A1W2PNN7 141 aa9.33□□□□□ -0.92
SCAMP3-208ENST00000490999 MT-ND6P03923 174 aa9.33□□□□□ -0.92
SCAMP3-208ENST00000490999 LYZL1Q6UWQ5 148 aa9.33□□□□□ -0.92
SCAMP3-208ENST00000490999 ZNF664Q8N3J9 261 aa9.33□□□□□ -0.92
SCAMP3-208ENST00000490999 RPP21Q9H633 154 aaKnown RBP9.33□□□□□ -0.92
SCAMP3-208ENST00000490999 K7EN84 100 aa9.32□□□□□ -0.92
SCAMP3-208ENST00000490999 CCL25O15444 150 aa9.32□□□□□ -0.92
SCAMP3-208ENST00000490999 NTF3P20783 257 aa9.32□□□□□ -0.92
SCAMP3-208ENST00000490999 PRR4Q16378 134 aa9.32□□□□□ -0.92
SCAMP3-208ENST00000490999 C1orf137Q5JT78 98 aa9.32□□□□□ -0.92
SCAMP3-208ENST00000490999 FAM231DQ6ZW35 169 aa9.32□□□□□ -0.92
SCAMP3-208ENST00000490999 FAM210AQ96ND0 272 aa9.32□□□□□ -0.92
SCAMP3-208ENST00000490999 CNFNQ9BYD5 112 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms