RNA–Protein interactions for RNA: ENST00000490990.1

RGPD6-211, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 4

Gene RGPD6, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-211ENST00000490990 DEFB104AQ8WTQ1 72 aa13.72□□□□□ -0.21
RGPD6-211ENST00000490990 ISOC2Q96AB3 205 aa13.72□□□□□ -0.21
RGPD6-211ENST00000490990 BORCS7Q96B45 105 aa13.72□□□□□ -0.21
RGPD6-211ENST00000490990 RPL39LQ96EH5 51 aaKnown RBP13.72□□□□□ -0.21
RGPD6-211ENST00000490990 V9GYV3 84 aa13.72□□□□□ -0.21
RGPD6-211ENST00000490990 A0A1B0GUT8 65 aa13.71□□□□□ -0.21
RGPD6-211ENST00000490990 A0A1B0GUV1 79 aa13.71□□□□□ -0.21
RGPD6-211ENST00000490990 RPL23P62829 140 aaKnown RBP13.71□□□□□ -0.21
RGPD6-211ENST00000490990 CLPSL2Q6UWE3 100 aa13.71□□□□□ -0.21
RGPD6-211ENST00000490990 FAT1Q14517 4588 aa13.7□□□□□ -0.22
RGPD6-211ENST00000490990 PEA15Q15121 130 aa13.7□□□□□ -0.22
RGPD6-211ENST00000490990 C20orf203Q8NBC4 194 aa13.7□□□□□ -0.22
RGPD6-211ENST00000490990 FAM30AQ9NZY2 134 aa13.7□□□□□ -0.22
RGPD6-211ENST00000490990 EPM2AB3EWF7 344 aa13.69□□□□□ -0.22
RGPD6-211ENST00000490990 AMTP48728 403 aa13.69□□□□□ -0.22
RGPD6-211ENST00000490990 HAMPP81172 84 aa13.69□□□□□ -0.22
RGPD6-211ENST00000490990 KRTAP26-1Q6PEX3 210 aa13.69□□□□□ -0.22
RGPD6-211ENST00000490990 SMDT1Q9H4I9 107 aa13.69□□□□□ -0.22
RGPD6-211ENST00000490990 NAT8Q9UHE5 227 aa13.69□□□□□ -0.22
RGPD6-211ENST00000490990 IGLV4-60A0A075B6I1 120 aa13.68□□□□□ -0.22
RGPD6-211ENST00000490990 REG3AQ06141 175 aa13.68□□□□□ -0.22
RGPD6-211ENST00000490990 Q6ZSA8 131 aa13.68□□□□□ -0.22
RGPD6-211ENST00000490990 TMEM191AQ9H0A3 160 aa13.68□□□□□ -0.22
RGPD6-211ENST00000490990 HLA-DQA1P01909 254 aa13.67□□□□□ -0.22
RGPD6-211ENST00000490990 ADIRFQ15847 76 aa13.67□□□□□ -0.22
RGPD6-211ENST00000490990 C14orf177Q52M58 125 aa13.67□□□□□ -0.22
RGPD6-211ENST00000490990 NUP35Q8NFH5 326 aa13.67□□□□□ -0.22
RGPD6-211ENST00000490990 TRBV6-5A0A0K0K1A5 114 aa13.66□□□□□ -0.22
RGPD6-211ENST00000490990 SDHAF1A6NFY7 115 aa13.66□□□□□ -0.22
RGPD6-211ENST00000490990 UBE2L6O14933 153 aa13.66□□□□□ -0.22
RGPD6-211ENST00000490990 NCR2O95944 276 aa13.66□□□□□ -0.22
RGPD6-211ENST00000490990 RNF185Q96GF1 192 aa13.66□□□□□ -0.22
RGPD6-211ENST00000490990 VPS13BQ7Z7G8 4022 aa13.66□□□□□ -0.22
RGPD6-211ENST00000490990 USP17L23D6RBM5 183 aa13.65□□□□□ -0.22
RGPD6-211ENST00000490990 GAS8-AS1O95177 125 aa13.65□□□□□ -0.22
RGPD6-211ENST00000490990 LINC01620Q4KN68 170 aa13.65□□□□□ -0.22
RGPD6-211ENST00000490990 SMR3BP02814 79 aaPredicted RBP13.64□□□□□ -0.23
RGPD6-211ENST00000490990 RAB4AP20338 218 aa13.64□□□□□ -0.23
RGPD6-211ENST00000490990 RIGQ13278 110 aa13.64□□□□□ -0.23
RGPD6-211ENST00000490990 Q5VSD8 79 aa13.64□□□□□ -0.23
RGPD6-211ENST00000490990 IGLV10-54A0A075B6I4 117 aa13.63□□□□□ -0.23
RGPD6-211ENST00000490990 TRAV8-4A0A0B4J246 113 aa13.63□□□□□ -0.23
RGPD6-211ENST00000490990 AMN1Q8IY45 258 aa13.63□□□□□ -0.23
RGPD6-211ENST00000490990 NAT8BQ9UHF3 227 aa13.63□□□□□ -0.23
RGPD6-211ENST00000490990 SMIM27A0A1W2PRY6 76 aa13.62□□□□□ -0.23
RGPD6-211ENST00000490990 I3L3M4 83 aa13.62□□□□□ -0.23
RGPD6-211ENST00000490990 APCSP02743 223 aa13.62□□□□□ -0.23
RGPD6-211ENST00000490990 MRAP2Q96G30 205 aa13.62□□□□□ -0.23
RGPD6-211ENST00000490990 H7C423 109 aa13.61□□□□□ -0.23
RGPD6-211ENST00000490990 RPS10P46783 165 aaKnown RBP13.61□□□□□ -0.23
RGPD6-211ENST00000490990 ST20Q9HBF5 79 aa13.61□□□□□ -0.23
RGPD6-211ENST00000490990 PRSS1P07477 247 aa13.6□□□□□ -0.23
RGPD6-211ENST00000490990 PMCHP20382 165 aa13.6□□□□□ -0.23
RGPD6-211ENST00000490990 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.59□□□□□ -0.23
RGPD6-211ENST00000490990 IGKV2-29A2NJV5 120 aaPredicted RBP13.59□□□□□ -0.23
RGPD6-211ENST00000490990 POLR2KP53803 58 aaKnown RBP13.59□□□□□ -0.23
RGPD6-211ENST00000490990 TSHBP01222 138 aa13.58□□□□□ -0.24
RGPD6-211ENST00000490990 AMMECR1LQ6DCA0 310 aa13.58□□□□□ -0.24
RGPD6-211ENST00000490990 TRBV27A0A0K0K1C4 114 aa13.57□□□□□ -0.24
RGPD6-211ENST00000490990 FGF6P10767 208 aa13.57□□□□□ -0.24
RGPD6-211ENST00000490990 ESDP10768 282 aa13.57□□□□□ -0.24
RGPD6-211ENST00000490990 TMEM242Q9NWH2 141 aa13.57□□□□□ -0.24
RGPD6-211ENST00000490990 SMKR1H3BMG3 65 aa13.56□□□□□ -0.24
RGPD6-211ENST00000490990 FAM229AH3BQW9 127 aa13.56□□□□□ -0.24
RGPD6-211ENST00000490990 DGAT2L7PQ6IED9 249 aa13.56□□□□□ -0.24
RGPD6-211ENST00000490990 RNASEKQ6P5S7 137 aaKnown RBP13.56□□□□□ -0.24
RGPD6-211ENST00000490990 FAM104BQ5XKR9 115 aa13.55□□□□□ -0.24
RGPD6-211ENST00000490990 NRACQ8N912 160 aa13.55□□□□□ -0.24
RGPD6-211ENST00000490990 CLRN3Q8NCR9 226 aa13.55□□□□□ -0.24
RGPD6-211ENST00000490990 A0A1B0GW15 77 aa13.54□□□□□ -0.24
RGPD6-211ENST00000490990 ZNF25P17030 456 aaPredicted RBP13.54□□□□□ -0.24
RGPD6-211ENST00000490990 SCXQ7RTU7 201 aa13.54□□□□□ -0.24
RGPD6-211ENST00000490990 IGKV3OR2-268A0A0C4DH90 116 aa13.53□□□□□ -0.24
RGPD6-211ENST00000490990 PPP1R17O96001 155 aa13.53□□□□□ -0.24
RGPD6-211ENST00000490990 INAFM2P0DMQ5 153 aa13.53□□□□□ -0.24
RGPD6-211ENST00000490990 CAMPP49913 170 aa13.53□□□□□ -0.24
RGPD6-211ENST00000490990 MRPL51Q4U2R6 128 aaKnown RBP13.53□□□□□ -0.24
RGPD6-211ENST00000490990 CHAC1Q9BUX1 264 aa13.53□□□□□ -0.24
RGPD6-211ENST00000490990 RAB14P61106 215 aa13.52□□□□□ -0.25
RGPD6-211ENST00000490990 SUMO2P61956 95 aaKnown RBP13.52□□□□□ -0.25
RGPD6-211ENST00000490990 C9orf163Q8N9P6 203 aa13.52□□□□□ -0.25
RGPD6-211ENST00000490990 GAGE12HA6NDE8 117 aa13.51□□□□□ -0.25
RGPD6-211ENST00000490990 VCYO14598 125 aa13.51□□□□□ -0.25
RGPD6-211ENST00000490990 A0A1B0GXF2 115 aa13.5□□□□□ -0.25
RGPD6-211ENST00000490990 hDV102S1A0JD36 115 aa13.5□□□□□ -0.25
RGPD6-211ENST00000490990 LINC00862A6NCI5 91 aa13.5□□□□□ -0.25
RGPD6-211ENST00000490990 HBBP68871 147 aa13.5□□□□□ -0.25
RGPD6-211ENST00000490990 MRPL54Q6P161 138 aaKnown RBP13.5□□□□□ -0.25
RGPD6-211ENST00000490990 MRPL52Q86TS9 123 aaKnown RBP13.5□□□□□ -0.25
RGPD6-211ENST00000490990 OR5A1Q8NGJ0 315 aa13.5□□□□□ -0.25
RGPD6-211ENST00000490990 CHCHD10Q8WYQ3 142 aaPredicted RBP13.5□□□□□ -0.25
RGPD6-211ENST00000490990 TMEM101Q96IK0 257 aa13.5□□□□□ -0.25
RGPD6-211ENST00000490990 BTF3L4Q96K17 158 aa13.5□□□□□ -0.25
RGPD6-211ENST00000490990 SRRM2Q9UQ35 2752 aaKnown RBP13.5□□□□□ -0.25
RGPD6-211ENST00000490990 C7orf77A4D0Y5 90 aa13.49□□□□□ -0.25
RGPD6-211ENST00000490990 PPP1R2P9O14990 202 aa13.49□□□□□ -0.25
RGPD6-211ENST00000490990 CNBPP62633 177 aaKnown RBP13.49□□□□□ -0.25
RGPD6-211ENST00000490990 CIRBP-AS1Q8TBR5 109 aa13.49□□□□□ -0.25
RGPD6-211ENST00000490990 S100A8P05109 93 aa13.48□□□□□ -0.25
RGPD6-211ENST00000490990 LINC00528Q8N1L1 170 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms