RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 URB1-AS1Q96HZ7 61 aa3.41□□□□□ -1.86
EPCAM-206ENST00000490733 IGLV2-18A0A075B6J9 118 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 TRGV2A0A075B6R0 118 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 C1orf196B1AJZ1 125 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 RHODO00212 210 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 NUPR1O60356 82 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 SPART-AS1P0CW21 52 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 SMIM17P0DL12 118 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 CKS2P33552 79 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 ZNF56Q15929 161 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 IQCJQ1A5X6 159 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 ZFP2Q6ZN57 461 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 SMIM15Q7Z3B0 74 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 ORMDL3Q8N138 153 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 LINC00469Q8N7U9 141 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 SLC25A29Q8N8R3 303 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 C18orf32Q8TCD1 76 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 MRAP2Q96G30 205 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 PRELID3AQ96N28 172 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 EDA2RQ9HAV5 297 aa3.4□□□□□ -1.87
EPCAM-206ENST00000490733 VPS13DQ5THJ4 4388 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 TRBV6-5A0A0K0K1A5 114 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 LOC100131303A0A0U1RQF7 123 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 PPBPP02775 128 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 NPSP0C0P6 89 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 LINC00694P0DN24 101 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 POLR2KP53803 58 aaKnown RBP3.39□□□□□ -1.87
EPCAM-206ENST00000490733 NANOS2P60321 138 aaKnown RBP3.39□□□□□ -1.87
EPCAM-206ENST00000490733 DAD1P61803 113 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 Q0VG73 95 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 Q6ZTC4 211 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 NEXN-AS1Q8NBZ9 246 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 VSIG2Q96IQ7 327 aa3.39□□□□□ -1.87
EPCAM-206ENST00000490733 KMT2AQ03164 3969 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 LOC389332A0A1B0GUA5 103 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 TRBV6-4A0A1B0GX49 114 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 LINC01546A6NGU7 62 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 IFITM10A6NMD0 228 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 K7EQD1 137 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 CIDEAO60543 219 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 SERF1AO75920 110 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 IFI27P40305 119 aaPredicted RBP3.38□□□□□ -1.87
EPCAM-206ENST00000490733 CRYBA4P53673 196 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 NDUFA6P56556 154 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 RAB5BP61020 215 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 SUMO2P61956 95 aaKnown RBP3.38□□□□□ -1.87
EPCAM-206ENST00000490733 OR10J3Q5JRS4 329 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 COA6Q5JTJ3 125 aaKnown RBP3.38□□□□□ -1.87
EPCAM-206ENST00000490733 NEGR1Q7Z3B1 354 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 C11orf45Q8TAV5 145 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 DEFB104AQ8WTQ1 72 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 TMEM70Q9BUB7 260 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 KRTAP4-4Q9BYR3 166 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 VCX2Q9H322 139 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 NIT2Q9NQR4 276 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 HHLA3Q9XRX5 114 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 LAMTOR2Q9Y2Q5 125 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 TENM2Q9NT68 2774 aa3.38□□□□□ -1.87
EPCAM-206ENST00000490733 TRAV26-1A0A087WT03 109 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 A0A096LNJ9 63 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 TRGV4A0A0C4DH28 118 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 A0A0J9YY99 117 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 TRBV10-1A0A0K0K1A3 114 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 TRBV27A0A0K0K1C4 114 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 TEX48A0A1B0GUV7 120 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 SDHAF1A6NFY7 115 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 F5H768 121 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 ATP5G1P05496 136 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 HTN3P15516 51 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 UBE2D3P61077 147 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 UBE2D2P62837 147 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 RPL32P62910 135 aaKnown RBP3.37□□□□□ -1.87
EPCAM-206ENST00000490733 NIT1Q86X76 327 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 RPL36ALQ969Q0 106 aaKnown RBP3.37□□□□□ -1.87
EPCAM-206ENST00000490733 C20orf78Q9BR46 151 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 SMIM2Q9BVW6 85 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 MAP1LC3AQ9H492 121 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 ST20Q9HBF5 79 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 PRO0255Q9UI72 69 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 DNAH6Q9C0G6 4158 aa3.37□□□□□ -1.87
EPCAM-206ENST00000490733 TRBV7-3A0A075B6L6 115 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 IGHV3-38A0A0C4DH36 116 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 GAGE12JA6NER3 117 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 H7C1H1 209 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 TCAPO15273 167 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 PPP1R17O96001 155 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 TSHBP01222 138 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 LINC00614P0C842 121 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 ESDP10768 282 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 SNRPEP62304 92 aaKnown RBP3.36□□□□□ -1.87
EPCAM-206ENST00000490733 GAGE1Q13065 139 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 GAGE4Q13068 117 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 GAGE5Q13069 117 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 RHOHQ15669 191 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 PMCHL1Q16048 86 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 NTM-AS1Q6ZSK4 140 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 BAGE3Q86Y29 109 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 HIST3H2BBQ8N257 126 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 Q8N8P6 123 aa3.36□□□□□ -1.87
EPCAM-206ENST00000490733 Q8N9P0 234 aaPredicted RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms