RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 IFI27P40305 119 aaPredicted RBP3.44□□□□□ -1.86
CSTF1-205ENST00000490539 ZNF138P52744 262 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 HSD52Q0P140 79 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 GAGE2BQ13066 116 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 GAGE2EQ4V326 116 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 OCIAD2Q56VL3 154 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 GAGE2AQ6NT46 116 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 LYZL1Q6UWQ5 148 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 GTF2H5Q6ZYL4 71 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 ORMDL3Q8N138 153 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 OR8A1Q8NGG7 326 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 KIR2DL5BQ8NHK3 375 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 IFI27L1Q96BM0 104 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 C17orf77Q96MU5 243 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 PRELID3AQ96N28 172 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 ASCL2Q99929 193 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 GAGE2DQ9UEU5 116 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 TP73-AS1Q9UF72 201 aa3.44□□□□□ -1.86
CSTF1-205ENST00000490539 D6R8Y8 96 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 H0Y8G0 127 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 SH2D1AO60880 128 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 MRPL51Q4U2R6 128 aaKnown RBP3.43□□□□□ -1.86
CSTF1-205ENST00000490539 UFSP1Q6NVU6 142 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 ADAMTSL5Q6ZMM2 481 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 ERASQ7Z444 233 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 SMIM29Q86T20 159 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 AMN1Q8IY45 258 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 FER1L6-AS1Q8NA97 138 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 OR5A1Q8NGJ0 315 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 AP1S3Q96PC3 154 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 VPS25Q9BRG1 176 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 CSTL1Q9H114 145 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 SELENOKQ9Y6D0 94 aa3.43□□□□□ -1.86
CSTF1-205ENST00000490539 K7EP34 96 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 M0R3E3 92 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 ZNF688P0C7X2 276 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 IGLC6P0CF74 106 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 HLA-DRB4P13762 266 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 CKS2P33552 79 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 DEFB131AP59861 70 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 CACNG7P62955 275 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 MORN3Q6PF18 240 aaPredicted RBP3.42□□□□□ -1.86
CSTF1-205ENST00000490539 SBSPONQ8IVN8 264 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 TPPP3Q9BW30 176 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 CNFNQ9BYD5 112 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 MAP1LC3AQ9H492 121 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 HIGD1BQ9P298 99 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 TP53TG1Q9Y2A0 90 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 TIMM8BQ9Y5J9 83 aaPredicted RBP3.42□□□□□ -1.86
CSTF1-205ENST00000490539 HLA-DRB4X5D2U9 266 aa3.42□□□□□ -1.86
CSTF1-205ENST00000490539 IGLV5-45A0A087WSX0 123 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 IGKV2-40A0A087WW87 121 aaPredicted RBP3.41□□□□□ -1.86
CSTF1-205ENST00000490539 LOC389332A0A1B0GUA5 103 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 RBAKDNA6NC62 111 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 K7EQG2 157 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 ATP5LO75964 103 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 GAS8-AS1O95177 125 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 NPYP01303 97 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 IGKV2D-40P01614 121 aaPredicted RBP3.41□□□□□ -1.86
CSTF1-205ENST00000490539 SMIM17P0DL12 118 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 RPL35AP18077 110 aaKnown RBP3.41□□□□□ -1.86
CSTF1-205ENST00000490539 EVI2AP22794 236 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 FCER1GP30273 86 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 NEGR1Q7Z3B1 354 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 APRG1Q8IVJ8 170 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 RNF185Q96GF1 192 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 TM2D3Q9BRN9 247 aa3.41□□□□□ -1.86
CSTF1-205ENST00000490539 NXT2Q9NPJ8 142 aaKnown RBP3.41□□□□□ -1.86
CSTF1-205ENST00000490539 TMSB15BA0A087X1C1 80 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 A0A1W2PPM0 123 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 FABP5P3A8MUU1 101 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 C3orf84H3BNL1 204 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 H3BUT2 72 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 SNAI2O43623 268 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 DUSP14O95147 198 aaKnown RBP3.4□□□□□ -1.87
CSTF1-205ENST00000490539 IGKCP01834 107 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 SMIM13P0DJ93 91 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 DEFB135Q30KP9 77 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 FOXI2Q6ZQN5 318 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 Q8N8P6 123 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 OR10J6PQ8NGY7 276 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 DCANP1Q8TF63 244 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 MRPL53Q96EL3 112 aaKnown RBP3.4□□□□□ -1.87
CSTF1-205ENST00000490539 VGLL1Q99990 258 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 SLC50A1Q9BRV3 221 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 WFDC10AQ9H1F0 79 aa3.4□□□□□ -1.87
CSTF1-205ENST00000490539 IGLV2-18A0A075B6J9 118 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 SMKR1H3BMG3 65 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 DPM2O94777 84 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 ORM1P02763 201 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 FABP2P12104 132 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 LEPP41159 167 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 NMUP48645 174 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 ZNF80P51504 273 aaPredicted RBP3.39□□□□□ -1.87
CSTF1-205ENST00000490539 TAL2Q16559 108 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 PCP2Q8IVA1 136 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 OR11H2Q8NH07 326 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 MUC7Q8TAX7 377 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 CHAC1Q9BUX1 264 aa3.39□□□□□ -1.87
CSTF1-205ENST00000490539 HHLA3Q9XRX5 114 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms