RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 PRELID3AQ96N28 172 aa11.62□□□□□ -0.55
RAPGEF3-212ENST00000490387 LAMTOR2Q9Y2Q5 125 aa11.62□□□□□ -0.55
RAPGEF3-212ENST00000490387 IQCJQ1A5X6 159 aa11.61□□□□□ -0.55
RAPGEF3-212ENST00000490387 MRPL18Q9H0U6 180 aaKnown RBP11.61□□□□□ -0.55
RAPGEF3-212ENST00000490387 Q9H8V8 135 aa11.61□□□□□ -0.55
RAPGEF3-212ENST00000490387 TRAV8-6A0A0B4J262 113 aa11.6□□□□□ -0.55
RAPGEF3-212ENST00000490387 PRSS47A8MTI9 375 aa11.6□□□□□ -0.55
RAPGEF3-212ENST00000490387 I3L3M4 83 aa11.6□□□□□ -0.55
RAPGEF3-212ENST00000490387 SIVA1O15304 175 aa11.6□□□□□ -0.55
RAPGEF3-212ENST00000490387 DNAH10OSP0CZ25 163 aa11.6□□□□□ -0.55
RAPGEF3-212ENST00000490387 KIAA1644Q3SXP7 199 aa11.6□□□□□ -0.55
RAPGEF3-212ENST00000490387 DNAH17Q9UFH2 4485 aa11.59□□□□□ -0.55
RAPGEF3-212ENST00000490387 COLCA2A8K830 154 aa11.59□□□□□ -0.55
RAPGEF3-212ENST00000490387 TSHBP01222 138 aa11.59□□□□□ -0.55
RAPGEF3-212ENST00000490387 COTL1Q14019 142 aa11.59□□□□□ -0.55
RAPGEF3-212ENST00000490387 DEFB104AQ8WTQ1 72 aa11.59□□□□□ -0.55
RAPGEF3-212ENST00000490387 SMIM2Q9BVW6 85 aa11.59□□□□□ -0.55
RAPGEF3-212ENST00000490387 IGHV1-24A0A0C4DH33 117 aa11.58□□□□□ -0.56
RAPGEF3-212ENST00000490387 NBDYA0A0U1RRE5 68 aa11.58□□□□□ -0.56
RAPGEF3-212ENST00000490387 VCYO14598 125 aa11.58□□□□□ -0.56
RAPGEF3-212ENST00000490387 ALKBH7Q9BT30 221 aaPredicted RBP11.58□□□□□ -0.56
RAPGEF3-212ENST00000490387 TRAPPC1Q9Y5R8 145 aa11.58□□□□□ -0.56
RAPGEF3-212ENST00000490387 PKHD1P08F94 4074 aa11.57□□□□□ -0.56
RAPGEF3-212ENST00000490387 TRBV25-1A0A075B6N4 114 aa11.57□□□□□ -0.56
RAPGEF3-212ENST00000490387 PMCHP20382 165 aa11.57□□□□□ -0.56
RAPGEF3-212ENST00000490387 FABP9Q0Z7S8 132 aa11.57□□□□□ -0.56
RAPGEF3-212ENST00000490387 LINC01556Q5JQF7 62 aa11.57□□□□□ -0.56
RAPGEF3-212ENST00000490387 NIT1Q86X76 327 aa11.57□□□□□ -0.56
RAPGEF3-212ENST00000490387 KRTAP1-5Q9BYS1 174 aa11.57□□□□□ -0.56
RAPGEF3-212ENST00000490387 Q8N3U1 123 aa11.56□□□□□ -0.56
RAPGEF3-212ENST00000490387 CHCHD7Q9BUK0 85 aa11.56□□□□□ -0.56
RAPGEF3-212ENST00000490387 ESDP10768 282 aa11.55□□□□□ -0.56
RAPGEF3-212ENST00000490387 AMTP48728 403 aa11.55□□□□□ -0.56
RAPGEF3-212ENST00000490387 C6orf223Q8N319 242 aa11.55□□□□□ -0.56
RAPGEF3-212ENST00000490387 TMEM243Q9BU79 118 aa11.55□□□□□ -0.56
RAPGEF3-212ENST00000490387 RAB5AP20339 215 aa11.54□□□□□ -0.56
RAPGEF3-212ENST00000490387 KIR2DL4Q99706 377 aa11.54□□□□□ -0.56
RAPGEF3-212ENST00000490387 CHCHD5Q9BSY4 110 aa11.54□□□□□ -0.56
RAPGEF3-212ENST00000490387 MAP1LC3AQ9H492 121 aa11.54□□□□□ -0.56
RAPGEF3-212ENST00000490387 K7EP13 123 aa11.53□□□□□ -0.56
RAPGEF3-212ENST00000490387 HERC2O95714 4834 aa11.52□□□□□ -0.56
RAPGEF3-212ENST00000490387 TTC32Q5I0X7 151 aa11.52□□□□□ -0.57
RAPGEF3-212ENST00000490387 Q8N8P6 123 aa11.52□□□□□ -0.57
RAPGEF3-212ENST00000490387 LOC389332A0A1B0GUA5 103 aa11.51□□□□□ -0.57
RAPGEF3-212ENST00000490387 TCAPO15273 167 aa11.51□□□□□ -0.57
RAPGEF3-212ENST00000490387 FCER1GP30273 86 aa11.51□□□□□ -0.57
RAPGEF3-212ENST00000490387 PKIAP61925 76 aa11.51□□□□□ -0.57
RAPGEF3-212ENST00000490387 TNP2Q05952 138 aa11.51□□□□□ -0.57
RAPGEF3-212ENST00000490387 GAGE6Q13070 117 aa11.51□□□□□ -0.57
RAPGEF3-212ENST00000490387 MPV17L2Q567V2 206 aa11.51□□□□□ -0.57
RAPGEF3-212ENST00000490387 PKD1P98161 4303 aa11.51□□□□□ -0.57
RAPGEF3-212ENST00000490387 H7C423 109 aa11.5□□□□□ -0.57
RAPGEF3-212ENST00000490387 IGHV3-30P01768 117 aa11.5□□□□□ -0.57
RAPGEF3-212ENST00000490387 IGHV3-33P01772 117 aa11.5□□□□□ -0.57
RAPGEF3-212ENST00000490387 TRGC2P03986 189 aa11.5□□□□□ -0.57
RAPGEF3-212ENST00000490387 IGHV3-30-3P0DP02 117 aa11.5□□□□□ -0.57
RAPGEF3-212ENST00000490387 IGHV3-30-5P0DP03 117 aa11.5□□□□□ -0.57
RAPGEF3-212ENST00000490387 NXT2Q9NPJ8 142 aaKnown RBP11.5□□□□□ -0.57
RAPGEF3-212ENST00000490387 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-212ENST00000490387 A0A1B0GUV1 79 aa11.49□□□□□ -0.57
RAPGEF3-212ENST00000490387 IGKV2-29A2NJV5 120 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-212ENST00000490387 LINC01546A6NGU7 62 aa11.49□□□□□ -0.57
RAPGEF3-212ENST00000490387 IFI27P40305 119 aaPredicted RBP11.49□□□□□ -0.57
RAPGEF3-212ENST00000490387 RBX1P62877 108 aa11.49□□□□□ -0.57
RAPGEF3-212ENST00000490387 C10orf126Q8N4M7 172 aa11.49□□□□□ -0.57
RAPGEF3-212ENST00000490387 C18orf32Q8TCD1 76 aa11.49□□□□□ -0.57
RAPGEF3-212ENST00000490387 KIAA1109Q2LD37 5005 aa11.48□□□□□ -0.57
RAPGEF3-212ENST00000490387 TRAV9-2A0A087WT02 112 aa11.48□□□□□ -0.57
RAPGEF3-212ENST00000490387 A0A087WX48 190 aa11.48□□□□□ -0.57
RAPGEF3-212ENST00000490387 TMEM262E9PQX1 116 aa11.48□□□□□ -0.57
RAPGEF3-212ENST00000490387 K7EMI3 77 aa11.48□□□□□ -0.57
RAPGEF3-212ENST00000490387 Q8N976 141 aa11.48□□□□□ -0.57
RAPGEF3-212ENST00000490387 C20orf203Q8NBC4 194 aa11.48□□□□□ -0.57
RAPGEF3-212ENST00000490387 IBA57-AS1B1ANH7 110 aa11.47□□□□□ -0.57
RAPGEF3-212ENST00000490387 UBE2L6O14933 153 aa11.47□□□□□ -0.57
RAPGEF3-212ENST00000490387 MRPL52Q86TS9 123 aaKnown RBP11.47□□□□□ -0.57
RAPGEF3-212ENST00000490387 DNAH11Q96DT5 4516 aa11.46□□□□□ -0.57
RAPGEF3-212ENST00000490387 IGLV4-60A0A075B6I1 120 aa11.46□□□□□ -0.57
RAPGEF3-212ENST00000490387 FGF6P10767 208 aa11.46□□□□□ -0.57
RAPGEF3-212ENST00000490387 BTF3P20290 206 aaKnown RBP11.46□□□□□ -0.57
RAPGEF3-212ENST00000490387 LAGE3Q14657 143 aa11.46□□□□□ -0.57
RAPGEF3-212ENST00000490387 KRTAP17-1Q9BYP8 105 aa11.46□□□□□ -0.57
RAPGEF3-212ENST00000490387 ZNF25P17030 456 aaPredicted RBP11.45□□□□□ -0.58
RAPGEF3-212ENST00000490387 PRSS3P2Q8NHM4 247 aa11.45□□□□□ -0.58
RAPGEF3-212ENST00000490387 URB1-AS1Q96HZ7 61 aa11.45□□□□□ -0.58
RAPGEF3-212ENST00000490387 KLK12Q9UKR0 248 aa11.45□□□□□ -0.58
RAPGEF3-212ENST00000490387 DYNC1H1Q14204 4646 aaKnown RBP11.44□□□□□ -0.58
RAPGEF3-212ENST00000490387 C16orf90A8MZG2 172 aa11.44□□□□□ -0.58
RAPGEF3-212ENST00000490387 RPL39P62891 51 aaKnown RBP11.44□□□□□ -0.58
RAPGEF3-212ENST00000490387 ORMDL2Q53FV1 153 aa11.44□□□□□ -0.58
RAPGEF3-212ENST00000490387 TIMM21Q9BVV7 248 aa11.44□□□□□ -0.58
RAPGEF3-212ENST00000490387 PRR34Q9NV39 138 aa11.44□□□□□ -0.58
RAPGEF3-212ENST00000490387 UBE2D4Q9Y2X8 147 aa11.44□□□□□ -0.58
RAPGEF3-212ENST00000490387 Q6ZRN7 208 aaPredicted RBP11.43□□□□□ -0.58
RAPGEF3-212ENST00000490387 CSDC2Q9Y534 153 aaKnown RBP11.43□□□□□ -0.58
RAPGEF3-212ENST00000490387 ANGP03950 147 aaKnown RBP11.42□□□□□ -0.58
RAPGEF3-212ENST00000490387 AMMECR1LQ6DCA0 310 aa11.42□□□□□ -0.58
RAPGEF3-212ENST00000490387 RNASEKQ6P5S7 137 aaKnown RBP11.42□□□□□ -0.58
RAPGEF3-212ENST00000490387 ENHOQ6UWT2 76 aa11.42□□□□□ -0.58
RAPGEF3-212ENST00000490387 FAM104AQ969W3 186 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms