RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 HUWE1Q7Z6Z7 4374 aaKnown RBP3.74□□□□□ -1.81
PTPRK-213ENST00000490332 IGKV3-7A0A075B6H7 116 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 TRBV25-1A0A075B6N4 114 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 TRAV26-2A0A0B4J265 109 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 TRAV12-3A0A0B4J271 114 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 TRAV25A0A0B4J276 109 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 IGHV3-16A0A0C4DH30 117 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 TRBV27A0A0K0K1C4 114 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 OR11H12B2RN74 326 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 F6UB75 175 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 J3KRW8 73 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 ZNF688P0C7X2 276 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 FABP2P12104 132 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 CRYBA4P53673 196 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 LINC00315P59091 139 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 KRTAP10-3P60369 221 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 PMVKQ15126 192 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 GTSCR1Q86UQ5 136 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 PCP2Q8IVA1 136 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 OR11H1Q8NG94 326 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 OR11H2Q8NH07 326 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 CLUHP3Q96NS8 147 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 LINC00467Q9BRT7 94 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 CHAC1Q9BUX1 264 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 ZNF702PQ9H963 129 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 EDA2RQ9HAV5 297 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 DNAH10Q8IVF4 4471 aa3.73□□□□□ -1.81
PTPRK-213ENST00000490332 MYMXA0A1B0GTQ4 84 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 SDHAF1A6NFY7 115 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 PRSS29PA6NIE9 313 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 A8MTW9 85 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 A8MWV9 139 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 E9PLD3 99 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 I3L3M4 83 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 K7ERU9 68 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 HOXD3P31249 432 aaPredicted RBP3.72□□□□□ -1.81
PTPRK-213ENST00000490332 SYNJ2BPP57105 145 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 PROK1P58294 105 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 TCTEX1D4Q5JR98 221 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 SUMO4Q6EEV6 95 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 ZFP2Q6ZN57 461 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 CEND1Q8N111 149 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 BAALCQ8WXS3 180 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 RPL39LQ96EH5 51 aaKnown RBP3.72□□□□□ -1.81
PTPRK-213ENST00000490332 SPXQ9BT56 116 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 ZNF256Q9Y2P7 627 aaPredicted RBP3.72□□□□□ -1.81
PTPRK-213ENST00000490332 KMT2AQ03164 3969 aa3.72□□□□□ -1.81
PTPRK-213ENST00000490332 IGKV2D-26A0A0A0MRZ7 120 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 TRAV8-6A0A0B4J262 113 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 A0A1W2PPM0 123 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 GAGE12BA1L429 117 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 IGIPA6NJ69 53 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 H3BUT2 72 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 K7EP34 96 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 M0QY20 66 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 HOXA3O43365 443 aaPredicted RBP3.71□□□□□ -1.82
PTPRK-213ENST00000490332 CRYGDP07320 174 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 GCSHP23434 173 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 NSUN5P1Q3KNT7 163 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 Q6ZQT7 251 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 C4orf3Q8WVX3 66 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 RAX2Q96IS3 184 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 DNAJC30Q96LL9 226 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 HIST1H4GQ99525 98 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 CST9LQ9H4G1 147 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 TNFRSF18Q9Y5U5 241 aa3.71□□□□□ -1.82
PTPRK-213ENST00000490332 PKHD1P08F94 4074 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 C11orf86A6NJI1 115 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 H3BMM0 161 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 M0R2P5 195 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 RHODO00212 210 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 DEFB1P60022 68 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 ZNF415Q09FC8 603 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 SMAGPQ0VAQ4 97 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 ZNF56Q15929 161 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 TMEM95Q3KNT9 176 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 ZNF876PQ49A33 203 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 UFSP1Q6NVU6 142 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 AMTNQ6UX39 209 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 Q6ZVH6 145 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 Q8N1Y9 231 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 MAPKAPK5-AS1Q8N8E1 139 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 DYNLRB2Q8TF09 96 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 SPAG8Q99932 426 aaPredicted RBP3.7□□□□□ -1.82
PTPRK-213ENST00000490332 MDFICQ9P1T7 246 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 TP53TG1Q9Y2A0 90 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 PYGO1Q9Y3Y4 419 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 SPCS1Q9Y6A9 102 aa3.7□□□□□ -1.82
PTPRK-213ENST00000490332 A0A087WWL8 130 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 A0A1B0GWB2 263 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 F8W1H4 67 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 J3QR89 54 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 CIDEAO60543 219 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 INSP01308 110 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 DEFB131AP59861 70 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 SRSF9Q13242 221 aaKnown RBP eCLIP3.69□□□□□ -1.82
PTPRK-213ENST00000490332 SPINK13Q1W4C9 94 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 DEFB114Q30KQ6 69 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 C12orf74Q32Q52 190 aa3.69□□□□□ -1.82
PTPRK-213ENST00000490332 OCIAD2Q56VL3 154 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms