RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 PMCHP20382 165 aa5.6□□□□□ -1.51
SF1-218ENST00000489544 SUMO2P61956 95 aaKnown RBP5.6□□□□□ -1.51
SF1-218ENST00000489544 COTL1Q14019 142 aa5.6□□□□□ -1.51
SF1-218ENST00000489544 LINC01556Q5JQF7 62 aa5.6□□□□□ -1.51
SF1-218ENST00000489544 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.6□□□□□ -1.51
SF1-218ENST00000489544 PRELID3AQ96N28 172 aa5.6□□□□□ -1.51
SF1-218ENST00000489544 YPEL4Q96NS1 127 aa5.6□□□□□ -1.51
SF1-218ENST00000489544 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
SF1-218ENST00000489544 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.59□□□□□ -1.51
SF1-218ENST00000489544 IGHV1-24A0A0C4DH33 117 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 LOC389332A0A1B0GUA5 103 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 IGKV2-29A2NJV5 120 aaPredicted RBP5.59□□□□□ -1.51
SF1-218ENST00000489544 I3L3M4 83 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 RTL8CO15255 209 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 SCO1O75880 301 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 APCSP02743 223 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 AMTP48728 403 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 IQCJQ1A5X6 159 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 MPV17L2Q567V2 206 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 ORMDL3Q8N138 153 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 Q8N976 141 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 TMEM243Q9BU79 118 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 CHCHD7Q9BUK0 85 aa5.59□□□□□ -1.51
SF1-218ENST00000489544 TRBV24-1A0A075B6N3 115 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 A0A087WX48 190 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 TRBV27A0A0K0K1C4 114 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 VCYO14598 125 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 HLA-DQA1P01909 254 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 PPBPP02775 128 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 RBX1P62877 108 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 TMEM97Q5BJF2 176 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 TTC32Q5I0X7 151 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 C1orf134Q5TEV5 83 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 C6orf223Q8N319 242 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 SMIM2Q9BVW6 85 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 GNB1LQ9BYB4 327 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 MRPL18Q9H0U6 180 aaKnown RBP5.58□□□□□ -1.52
SF1-218ENST00000489544 Q9HAA7 133 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 SMCO4Q9NRQ5 59 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 KLK12Q9UKR0 248 aa5.58□□□□□ -1.52
SF1-218ENST00000489544 IGLV4-60A0A075B6I1 120 aa5.57□□□□□ -1.52
SF1-218ENST00000489544 TRAV9-2A0A087WT02 112 aa5.57□□□□□ -1.52
SF1-218ENST00000489544 IBA57-AS1B1ANH7 110 aa5.57□□□□□ -1.52
SF1-218ENST00000489544 TCAPO15273 167 aa5.57□□□□□ -1.52
SF1-218ENST00000489544 PPP1R17O96001 155 aa5.57□□□□□ -1.52
SF1-218ENST00000489544 FABP9Q0Z7S8 132 aa5.57□□□□□ -1.52
SF1-218ENST00000489544 CLPSL2Q6UWE3 100 aa5.57□□□□□ -1.52
SF1-218ENST00000489544 C20orf78Q9BR46 151 aa5.57□□□□□ -1.52
SF1-218ENST00000489544 DNAH11Q96DT5 4516 aa5.57□□□□□ -1.52
SF1-218ENST00000489544 FRAS1Q86XX4 4008 aa5.57□□□□□ -1.52
SF1-218ENST00000489544 PHOX2AO14813 284 aa5.56□□□□□ -1.52
SF1-218ENST00000489544 ANGP03950 147 aaKnown RBP5.56□□□□□ -1.52
SF1-218ENST00000489544 ESDP10768 282 aa5.56□□□□□ -1.52
SF1-218ENST00000489544 FCER1GP30273 86 aa5.56□□□□□ -1.52
SF1-218ENST00000489544 Q6ZRN7 208 aaPredicted RBP5.56□□□□□ -1.52
SF1-218ENST00000489544 C20orf203Q8NBC4 194 aa5.56□□□□□ -1.52
SF1-218ENST00000489544 UBE2WQ96B02 151 aa5.56□□□□□ -1.52
SF1-218ENST00000489544 KIR2DL4Q99706 377 aa5.56□□□□□ -1.52
SF1-218ENST00000489544 TRAPPC1Q9Y5R8 145 aa5.56□□□□□ -1.52
SF1-218ENST00000489544 UBE2L6O14933 153 aa5.55□□□□□ -1.52
SF1-218ENST00000489544 ATP6V1G1O75348 118 aa5.55□□□□□ -1.52
SF1-218ENST00000489544 MT-ND6P03923 174 aa5.55□□□□□ -1.52
SF1-218ENST00000489544 FGF6P10767 208 aa5.55□□□□□ -1.52
SF1-218ENST00000489544 IFI27P40305 119 aaPredicted RBP5.55□□□□□ -1.52
SF1-218ENST00000489544 RPL32P62910 135 aaKnown RBP5.55□□□□□ -1.52
SF1-218ENST00000489544 TNP2Q05952 138 aa5.55□□□□□ -1.52
SF1-218ENST00000489544 RNASEKQ6P5S7 137 aaKnown RBP5.55□□□□□ -1.52
SF1-218ENST00000489544 ENHOQ6UWT2 76 aa5.55□□□□□ -1.52
SF1-218ENST00000489544 LINC00269Q8N2A0 174 aa5.55□□□□□ -1.52
SF1-218ENST00000489544 C10orf126Q8N4M7 172 aa5.55□□□□□ -1.52
SF1-218ENST00000489544 ALKBH7Q9BT30 221 aaPredicted RBP5.55□□□□□ -1.52
SF1-218ENST00000489544 MAP1LC3AQ9H492 121 aa5.55□□□□□ -1.52
SF1-218ENST00000489544 IGKV3OR2-268A0A0C4DH90 116 aa5.54□□□□□ -1.52
SF1-218ENST00000489544 PRSS29PA6NIE9 313 aa5.54□□□□□ -1.52
SF1-218ENST00000489544 COLCA2A8K830 154 aa5.54□□□□□ -1.52
SF1-218ENST00000489544 PRSS47A8MTI9 375 aa5.54□□□□□ -1.52
SF1-218ENST00000489544 RPL39P62891 51 aaKnown RBP5.54□□□□□ -1.52
SF1-218ENST00000489544 COX19Q49B96 90 aa5.54□□□□□ -1.52
SF1-218ENST00000489544 AMMECR1LQ6DCA0 310 aa5.54□□□□□ -1.52
SF1-218ENST00000489544 Q8N8P6 123 aa5.54□□□□□ -1.52
SF1-218ENST00000489544 LAMTOR2Q9Y2Q5 125 aa5.54□□□□□ -1.52
SF1-218ENST00000489544 IGLV10-54A0A075B6I4 117 aa5.53□□□□□ -1.52
SF1-218ENST00000489544 RNASE13Q5GAN3 156 aaKnown RBP5.53□□□□□ -1.52
SF1-218ENST00000489544 OPRPNQ99935 248 aaPredicted RBP5.53□□□□□ -1.52
SF1-218ENST00000489544 PKD1P98161 4303 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 IGKV2D-24A0A075B6R9 120 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 A0A1B0GUV1 79 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 K7EP13 123 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 CRPP02741 224 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 TRGC2P03986 189 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 RAB5AP20339 215 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 LORP23490 312 aaPredicted RBP5.52□□□□□ -1.53
SF1-218ENST00000489544 FUSP35637 526 aaKnown RBP eCLIP5.52□□□□□ -1.53
SF1-218ENST00000489544 PKIAP61925 76 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 REG3AQ06141 175 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 LAGE3Q14657 143 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 MAPKAPK5-AS1Q8N8E1 139 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 PRSS3P2Q8NHM4 247 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 UBE2D4Q9Y2X8 147 aa5.52□□□□□ -1.53
SF1-218ENST00000489544 DYNC1H1Q14204 4646 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms