RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, human

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG9A-222	ENST00000488833	hDV102S1	A0JD36	115 aa		11.77	□□□□□ -0.53
ATG9A-222	ENST00000488833	AMT	P48728	403 aa		11.77	□□□□□ -0.53
ATG9A-222	ENST00000488833	COTL1	Q14019	142 aa		11.77	□□□□□ -0.53
ATG9A-222	ENST00000488833	TCTE3	Q8IZS6	198 aa		11.77	□□□□□ -0.53
ATG9A-222	ENST00000488833	C9orf62	Q8N4C0	152 aa		11.77	□□□□□ -0.53
ATG9A-222	ENST00000488833	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.77	□□□□□ -0.53
ATG9A-222	ENST00000488833	TWIST1	Q15672	202 aa		11.76	□□□□□ -0.53
ATG9A-222	ENST00000488833	WDR73	Q6P4I2	378 aa		11.76	□□□□□ -0.53
ATG9A-222	ENST00000488833	RNASE7	Q9H1E1	156 aa	Known RBP	11.76	□□□□□ -0.53
ATG9A-222	ENST00000488833	RPP21	Q9H633	154 aa	Known RBP	11.76	□□□□□ -0.53
ATG9A-222	ENST00000488833	PANO1	I0J062	215 aa		11.75	□□□□□ -0.53
ATG9A-222	ENST00000488833	OXT	P01178	125 aa		11.75	□□□□□ -0.53
ATG9A-222	ENST00000488833	TAGLN2	P37802	199 aa	Known RBP	11.75	□□□□□ -0.53
ATG9A-222	ENST00000488833	CNBP	P62633	177 aa	Known RBP	11.75	□□□□□ -0.53
ATG9A-222	ENST00000488833	CNFN	Q9BYD5	112 aa		11.75	□□□□□ -0.53
ATG9A-222	ENST00000488833	TRAV26-2	A0A0B4J265	109 aa		11.74	□□□□□ -0.53
ATG9A-222	ENST00000488833		K7EN84	100 aa		11.74	□□□□□ -0.53
ATG9A-222	ENST00000488833	SDIM1	Q6ZPB5	146 aa		11.74	□□□□□ -0.53
ATG9A-222	ENST00000488833	AP5S1	Q9NUS5	200 aa		11.74	□□□□□ -0.53
ATG9A-222	ENST00000488833	GATD1	Q8NB37	220 aa		11.73	□□□□□ -0.53
ATG9A-222	ENST00000488833	OCC1	Q8TAD7	63 aa		11.72	□□□□□ -0.53
ATG9A-222	ENST00000488833	HMCN2	Q8NDA2	5059 aa		11.72	□□□□□ -0.53
ATG9A-222	ENST00000488833	IGHV3-64	A0A075B6Q5	118 aa		11.71	□□□□□ -0.53
ATG9A-222	ENST00000488833	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.71	□□□□□ -0.53
ATG9A-222	ENST00000488833	IGKV3OR2-268	A0A0C4DH90	116 aa		11.71	□□□□□ -0.53
ATG9A-222	ENST00000488833	HNRNPA3	P51991	378 aa	Known RBP	11.71	□□□□□ -0.53
ATG9A-222	ENST00000488833	RPL39L	Q96EH5	51 aa	Known RBP	11.71	□□□□□ -0.53
ATG9A-222	ENST00000488833	SMIM15	Q7Z3B0	74 aa		11.7	□□□□□ -0.54
ATG9A-222	ENST00000488833	GAGE12H	A6NDE8	117 aa		11.69	□□□□□ -0.54
ATG9A-222	ENST00000488833	CIRBP	Q14011	172 aa	Known RBP	11.69	□□□□□ -0.54
ATG9A-222	ENST00000488833	SERTAD4-AS1	Q5TG53	156 aa		11.69	□□□□□ -0.54
ATG9A-222	ENST00000488833	AMMECR1L	Q6DCA0	310 aa		11.69	□□□□□ -0.54
ATG9A-222	ENST00000488833		Q6ZNX1	250 aa		11.69	□□□□□ -0.54
ATG9A-222	ENST00000488833	GTSF1	Q8WW33	167 aa		11.69	□□□□□ -0.54
ATG9A-222	ENST00000488833	GATC	O43716	136 aa	Known RBP	11.68	□□□□□ -0.54
ATG9A-222	ENST00000488833	SLPI	P03973	132 aa		11.68	□□□□□ -0.54
ATG9A-222	ENST00000488833	FOXA3	P55318	350 aa	Predicted RBP	11.68	□□□□□ -0.54
ATG9A-222	ENST00000488833	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.67	□□□□□ -0.54
ATG9A-222	ENST00000488833	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.67	□□□□□ -0.54
ATG9A-222	ENST00000488833	TMEM250	H0YL14	139 aa		11.67	□□□□□ -0.54
ATG9A-222	ENST00000488833	NCR2	O95944	276 aa		11.67	□□□□□ -0.54
ATG9A-222	ENST00000488833	APCS	P02743	223 aa		11.67	□□□□□ -0.54
ATG9A-222	ENST00000488833	CHTF8	P0CG12	524 aa		11.67	□□□□□ -0.54
ATG9A-222	ENST00000488833	RNASEK	Q6P5S7	137 aa	Known RBP	11.67	□□□□□ -0.54
ATG9A-222	ENST00000488833	C15orf56	Q8N910	161 aa		11.67	□□□□□ -0.54
ATG9A-222	ENST00000488833	DPH3	Q96FX2	82 aa		11.67	□□□□□ -0.54
ATG9A-222	ENST00000488833	SDHAF1	A6NFY7	115 aa		11.66	□□□□□ -0.54
ATG9A-222	ENST00000488833	BLOC1S1	P78537	153 aa		11.66	□□□□□ -0.54
ATG9A-222	ENST00000488833	CFAP161	Q6P656	301 aa		11.66	□□□□□ -0.54
ATG9A-222	ENST00000488833	ALKAL2	Q6UX46	152 aa		11.66	□□□□□ -0.54
ATG9A-222	ENST00000488833	CEBPG	P53567	150 aa		11.65	□□□□□ -0.54
ATG9A-222	ENST00000488833	HIGD2B	Q4VC39	106 aa		11.65	□□□□□ -0.54
ATG9A-222	ENST00000488833	TEX261	Q6UWH6	196 aa		11.65	□□□□□ -0.54
ATG9A-222	ENST00000488833	SPACA4	Q8TDM5	124 aa		11.65	□□□□□ -0.54
ATG9A-222	ENST00000488833	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.65	□□□□□ -0.54
ATG9A-222	ENST00000488833	RNF185	Q96GF1	192 aa		11.65	□□□□□ -0.54
ATG9A-222	ENST00000488833		A0A087WYN8	130 aa		11.64	□□□□□ -0.55
ATG9A-222	ENST00000488833		A8MWL6	223 aa		11.64	□□□□□ -0.55
ATG9A-222	ENST00000488833	FGF6	P10767	208 aa		11.64	□□□□□ -0.55
ATG9A-222	ENST00000488833	FAM231D	Q6ZW35	169 aa		11.64	□□□□□ -0.55
ATG9A-222	ENST00000488833	AKAP14	Q86UN6	197 aa		11.64	□□□□□ -0.55
ATG9A-222	ENST00000488833		H7C423	109 aa		11.63	□□□□□ -0.55
ATG9A-222	ENST00000488833	RPS10	P46783	165 aa	Known RBP	11.62	□□□□□ -0.55
ATG9A-222	ENST00000488833	CT83	Q5H943	113 aa		11.62	□□□□□ -0.55
ATG9A-222	ENST00000488833	BORCS7	Q96B45	105 aa		11.62	□□□□□ -0.55
ATG9A-222	ENST00000488833		I3L3M4	83 aa		11.61	□□□□□ -0.55
ATG9A-222	ENST00000488833	PMCH	P20382	165 aa		11.61	□□□□□ -0.55
ATG9A-222	ENST00000488833	hCG_2014768	A0A024R1R8	64 aa		11.6	□□□□□ -0.55
ATG9A-222	ENST00000488833	ZNF25	P17030	456 aa	Predicted RBP	11.6	□□□□□ -0.55
ATG9A-222	ENST00000488833	COX6A2	Q02221	97 aa		11.6	□□□□□ -0.55
ATG9A-222	ENST00000488833	LYPD6B	Q8NI32	183 aa		11.6	□□□□□ -0.55
ATG9A-222	ENST00000488833	TMEM101	Q96IK0	257 aa		11.6	□□□□□ -0.55
ATG9A-222	ENST00000488833	BTF3L4	Q96K17	158 aa		11.6	□□□□□ -0.55
ATG9A-222	ENST00000488833	PLAC8	Q9NZF1	115 aa		11.6	□□□□□ -0.55
ATG9A-222	ENST00000488833	PLA2G2D	Q9UNK4	145 aa		11.6	□□□□□ -0.55
ATG9A-222	ENST00000488833	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.59	□□□□□ -0.55
ATG9A-222	ENST00000488833	TRBV6-5	A0A0K0K1A5	114 aa		11.59	□□□□□ -0.55
ATG9A-222	ENST00000488833	FAM231B	A6NCW3	169 aa		11.59	□□□□□ -0.55
ATG9A-222	ENST00000488833	GAS8-AS1	O95177	125 aa		11.59	□□□□□ -0.55
ATG9A-222	ENST00000488833	OR5A1	Q8NGJ0	315 aa		11.59	□□□□□ -0.55
ATG9A-222	ENST00000488833	SMIM7	Q9BQ49	75 aa		11.59	□□□□□ -0.55
ATG9A-222	ENST00000488833	ST20	Q9HBF5	79 aa		11.59	□□□□□ -0.55
ATG9A-222	ENST00000488833	TMEM242	Q9NWH2	141 aa		11.59	□□□□□ -0.55
ATG9A-222	ENST00000488833	IGKV2-24	A0A0C4DH68	120 aa		11.58	□□□□□ -0.56
ATG9A-222	ENST00000488833	NDUFS6	O75380	124 aa	Known RBP	11.58	□□□□□ -0.56
ATG9A-222	ENST00000488833	TSHB	P01222	138 aa		11.58	□□□□□ -0.56
ATG9A-222	ENST00000488833	XCL1	P47992	114 aa		11.58	□□□□□ -0.56
ATG9A-222	ENST00000488833	FOXI1	Q12951	378 aa		11.58	□□□□□ -0.56
ATG9A-222	ENST00000488833	MAJIN	Q3KP22	176 aa		11.58	□□□□□ -0.56
ATG9A-222	ENST00000488833		Q6ZRU5	148 aa		11.58	□□□□□ -0.56
ATG9A-222	ENST00000488833	PRSS3P2	Q8NHM4	247 aa		11.58	□□□□□ -0.56
ATG9A-222	ENST00000488833	C7orf33	Q8WU49	177 aa		11.58	□□□□□ -0.56
ATG9A-222	ENST00000488833	EIF5A2	Q9GZV4	153 aa	Known RBP	11.58	□□□□□ -0.56
ATG9A-222	ENST00000488833		A0A1B0GUT8	65 aa		11.57	□□□□□ -0.56
ATG9A-222	ENST00000488833	HIGD1C	A8MV81	97 aa		11.57	□□□□□ -0.56
ATG9A-222	ENST00000488833	TSKU	Q8WUA8	353 aa		11.57	□□□□□ -0.56
ATG9A-222	ENST00000488833	MRAP2	Q96G30	205 aa		11.57	□□□□□ -0.56
ATG9A-222	ENST00000488833	PHOX2A	O14813	284 aa		11.56	□□□□□ -0.56
ATG9A-222	ENST00000488833	CCL25	O15444	150 aa		11.56	□□□□□ -0.56
ATG9A-222	ENST00000488833	ESD	P10768	282 aa		11.56	□□□□□ -0.56

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