RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 XGP55808 180 aa10.51□□□□□ -0.73
CTDSP1-209ENST00000488627 BORCS7Q96B45 105 aa10.51□□□□□ -0.73
CTDSP1-209ENST00000488627 TMEM243Q9BU79 118 aa10.51□□□□□ -0.73
CTDSP1-209ENST00000488627 IGLV5-52A0A0A0MRZ9 124 aa10.5□□□□□ -0.73
CTDSP1-209ENST00000488627 A0A1B0GUV1 79 aa10.5□□□□□ -0.73
CTDSP1-209ENST00000488627 SMIM27A0A1W2PRY6 76 aa10.5□□□□□ -0.73
CTDSP1-209ENST00000488627 RAB4AP20338 218 aa10.5□□□□□ -0.73
CTDSP1-209ENST00000488627 PCLOQ9Y6V0 5065 aa10.49□□□□□ -0.73
CTDSP1-209ENST00000488627 TRBV6-5A0A0K0K1A5 114 aa10.49□□□□□ -0.73
CTDSP1-209ENST00000488627 COTL1Q14019 142 aa10.49□□□□□ -0.73
CTDSP1-209ENST00000488627 KRTAP26-1Q6PEX3 210 aa10.49□□□□□ -0.73
CTDSP1-209ENST00000488627 LINC00269Q8N2A0 174 aa10.49□□□□□ -0.73
CTDSP1-209ENST00000488627 C20orf203Q8NBC4 194 aa10.49□□□□□ -0.73
CTDSP1-209ENST00000488627 NAT8BQ9UHF3 227 aa10.49□□□□□ -0.73
CTDSP1-209ENST00000488627 IGLV4-60A0A075B6I1 120 aa10.48□□□□□ -0.73
CTDSP1-209ENST00000488627 SDHAF1A6NFY7 115 aa10.48□□□□□ -0.73
CTDSP1-209ENST00000488627 RIGQ13278 110 aa10.48□□□□□ -0.73
CTDSP1-209ENST00000488627 MIAQ16674 131 aa10.48□□□□□ -0.73
CTDSP1-209ENST00000488627 AMN1Q8IY45 258 aa10.48□□□□□ -0.73
CTDSP1-209ENST00000488627 C1orf43Q9BWL3 253 aa10.48□□□□□ -0.73
CTDSP1-209ENST00000488627 CRPP02741 224 aa10.47□□□□□ -0.73
CTDSP1-209ENST00000488627 RPS10P46783 165 aaKnown RBP10.47□□□□□ -0.73
CTDSP1-209ENST00000488627 AMTP48728 403 aa10.47□□□□□ -0.73
CTDSP1-209ENST00000488627 Q8N1X5 172 aa10.47□□□□□ -0.73
CTDSP1-209ENST00000488627 NCR2O95944 276 aa10.46□□□□□ -0.73
CTDSP1-209ENST00000488627 RAB14P61106 215 aa10.46□□□□□ -0.73
CTDSP1-209ENST00000488627 IFITM2Q01629 132 aa10.46□□□□□ -0.73
CTDSP1-209ENST00000488627 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.73
CTDSP1-209ENST00000488627 MRAP2Q96G30 205 aa10.46□□□□□ -0.73
CTDSP1-209ENST00000488627 ABCA13Q86UQ4 5058 aa10.45□□□□□ -0.74
CTDSP1-209ENST00000488627 POLR2KP53803 58 aaKnown RBP10.45□□□□□ -0.74
CTDSP1-209ENST00000488627 REG3AQ06141 175 aa10.45□□□□□ -0.74
CTDSP1-209ENST00000488627 CLLU1Q5K131 121 aa10.45□□□□□ -0.74
CTDSP1-209ENST00000488627 TMEM70Q9BUB7 260 aa10.45□□□□□ -0.74
CTDSP1-209ENST00000488627 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.44□□□□□ -0.74
CTDSP1-209ENST00000488627 ST20Q9HBF5 79 aa10.44□□□□□ -0.74
CTDSP1-209ENST00000488627 FAM30AQ9NZY2 134 aa10.44□□□□□ -0.74
CTDSP1-209ENST00000488627 DNAH8Q96JB1 4490 aa10.43□□□□□ -0.74
CTDSP1-209ENST00000488627 SMKR1H3BMG3 65 aa10.43□□□□□ -0.74
CTDSP1-209ENST00000488627 I3L3M4 83 aa10.43□□□□□ -0.74
CTDSP1-209ENST00000488627 TSHBP01222 138 aa10.43□□□□□ -0.74
CTDSP1-209ENST00000488627 FAM104BQ5XKR9 115 aa10.43□□□□□ -0.74
CTDSP1-209ENST00000488627 NRACQ8N912 160 aa10.43□□□□□ -0.74
CTDSP1-209ENST00000488627 TRBV27A0A0K0K1C4 114 aa10.42□□□□□ -0.74
CTDSP1-209ENST00000488627 UBE2L6O14933 153 aa10.42□□□□□ -0.74
CTDSP1-209ENST00000488627 ESDP10768 282 aa10.42□□□□□ -0.74
CTDSP1-209ENST00000488627 PMCHP20382 165 aa10.42□□□□□ -0.74
CTDSP1-209ENST00000488627 CAMPP49913 170 aa10.42□□□□□ -0.74
CTDSP1-209ENST00000488627 FAT1Q14517 4588 aa10.42□□□□□ -0.74
CTDSP1-209ENST00000488627 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.41□□□□□ -0.74
CTDSP1-209ENST00000488627 TRAV8-4A0A0B4J246 113 aa10.41□□□□□ -0.74
CTDSP1-209ENST00000488627 A0A1B0GXF2 115 aa10.41□□□□□ -0.74
CTDSP1-209ENST00000488627 IGKV2-29A2NJV5 120 aaPredicted RBP10.41□□□□□ -0.74
CTDSP1-209ENST00000488627 USP17L23D6RBM5 183 aa10.41□□□□□ -0.74
CTDSP1-209ENST00000488627 H7C423 109 aa10.41□□□□□ -0.74
CTDSP1-209ENST00000488627 APCSP02743 223 aa10.41□□□□□ -0.74
CTDSP1-209ENST00000488627 MRPL51Q4U2R6 128 aaKnown RBP10.41□□□□□ -0.74
CTDSP1-209ENST00000488627 IGLV10-54A0A075B6I4 117 aa10.4□□□□□ -0.74
CTDSP1-209ENST00000488627 A0A1B0GW15 77 aa10.4□□□□□ -0.74
CTDSP1-209ENST00000488627 LINC01620Q4KN68 170 aa10.4□□□□□ -0.74
CTDSP1-209ENST00000488627 Q6ZSA8 131 aa10.4□□□□□ -0.74
CTDSP1-209ENST00000488627 TMEM242Q9NWH2 141 aa10.4□□□□□ -0.74
CTDSP1-209ENST00000488627 HLA-DQA1P01909 254 aa10.39□□□□□ -0.75
CTDSP1-209ENST00000488627 FGF6P10767 208 aa10.39□□□□□ -0.75
CTDSP1-209ENST00000488627 HAMPP81172 84 aa10.39□□□□□ -0.75
CTDSP1-209ENST00000488627 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
CTDSP1-209ENST00000488627 MRPL54Q6P161 138 aaKnown RBP10.39□□□□□ -0.75
CTDSP1-209ENST00000488627 LINC00862A6NCI5 91 aa10.38□□□□□ -0.75
CTDSP1-209ENST00000488627 VCYO14598 125 aa10.38□□□□□ -0.75
CTDSP1-209ENST00000488627 PPP1R2P9O14990 202 aa10.38□□□□□ -0.75
CTDSP1-209ENST00000488627 PPP1R17O96001 155 aa10.38□□□□□ -0.75
CTDSP1-209ENST00000488627 PRSS1P07477 247 aa10.38□□□□□ -0.75
CTDSP1-209ENST00000488627 SUMO2P61956 95 aaKnown RBP10.38□□□□□ -0.75
CTDSP1-209ENST00000488627 HBBP68871 147 aa10.38□□□□□ -0.75
CTDSP1-209ENST00000488627 C14orf177Q52M58 125 aa10.38□□□□□ -0.75
CTDSP1-209ENST00000488627 TRBV24-1A0A075B6N3 115 aa10.37□□□□□ -0.75
CTDSP1-209ENST00000488627 AMMECR1LQ6DCA0 310 aa10.37□□□□□ -0.75
CTDSP1-209ENST00000488627 RNASEKQ6P5S7 137 aaKnown RBP10.37□□□□□ -0.75
CTDSP1-209ENST00000488627 ZNF25P17030 456 aaPredicted RBP10.36□□□□□ -0.75
CTDSP1-209ENST00000488627 ANAPC16Q96DE5 110 aa10.36□□□□□ -0.75
CTDSP1-209ENST00000488627 MT-ND4LP03901 98 aa10.35□□□□□ -0.75
CTDSP1-209ENST00000488627 S100A8P05109 93 aa10.35□□□□□ -0.75
CTDSP1-209ENST00000488627 CKS2P33552 79 aa10.35□□□□□ -0.75
CTDSP1-209ENST00000488627 UQCC3Q6UW78 93 aa10.35□□□□□ -0.75
CTDSP1-209ENST00000488627 ATP5L2Q7Z4Y8 100 aa10.35□□□□□ -0.75
CTDSP1-209ENST00000488627 MRPL52Q86TS9 123 aaKnown RBP10.35□□□□□ -0.75
CTDSP1-209ENST00000488627 C20orf78Q9BR46 151 aa10.35□□□□□ -0.75
CTDSP1-209ENST00000488627 F8W036 122 aa10.34□□□□□ -0.75
CTDSP1-209ENST00000488627 SMR3BP02814 79 aaPredicted RBP10.34□□□□□ -0.75
CTDSP1-209ENST00000488627 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
CTDSP1-209ENST00000488627 RPL32P62910 135 aaKnown RBP10.34□□□□□ -0.75
CTDSP1-209ENST00000488627 IGKV3OR2-268A0A0C4DH90 116 aa10.33□□□□□ -0.76
CTDSP1-209ENST00000488627 TMEM218A2RU14 115 aa10.33□□□□□ -0.76
CTDSP1-209ENST00000488627 C7orf77A4D0Y5 90 aa10.33□□□□□ -0.76
CTDSP1-209ENST00000488627 EPM2AB3EWF7 344 aa10.33□□□□□ -0.76
CTDSP1-209ENST00000488627 D6R8Y8 96 aa10.33□□□□□ -0.76
CTDSP1-209ENST00000488627 TNFRSF6BO95407 300 aa10.33□□□□□ -0.76
CTDSP1-209ENST00000488627 DGAT2L7PQ6IED9 249 aa10.33□□□□□ -0.76
CTDSP1-209ENST00000488627 CLRN3Q8NCR9 226 aa10.33□□□□□ -0.76
CTDSP1-209ENST00000488627 CHCHD10Q8WYQ3 142 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms