RNA–Protein interactions for RNA: ENST00000488255.1

VPS8-224, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-224ENST00000488255 IGKV2D-26A0A0A0MRZ7 120 aa2.53□□□□□ -2
VPS8-224ENST00000488255 IGLV3-32A0A0A0MS00 114 aa2.53□□□□□ -2
VPS8-224ENST00000488255 TRAV10A0A0B4J240 114 aa2.53□□□□□ -2
VPS8-224ENST00000488255 SDHAF1A6NFY7 115 aa2.53□□□□□ -2
VPS8-224ENST00000488255 IGLV3-19P01714 112 aa2.53□□□□□ -2
VPS8-224ENST00000488255 SERF2P84101 59 aa2.53□□□□□ -2
VPS8-224ENST00000488255 C1orf134Q5TEV5 83 aa2.53□□□□□ -2
VPS8-224ENST00000488255 Q6ZQT0 140 aa2.53□□□□□ -2
VPS8-224ENST00000488255 Q86TA4 180 aa2.53□□□□□ -2
VPS8-224ENST00000488255 LINC00474Q9P2X8 69 aa2.53□□□□□ -2
VPS8-224ENST00000488255 HILPDAQ9Y5L2 63 aa2.53□□□□□ -2
VPS8-224ENST00000488255 PREX1Q8TCU6 1659 aa2.53□□□□□ -2
VPS8-224ENST00000488255 GPR179Q6PRD1 2367 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 IGLV3-12A0A075B6K2 115 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 TRBV6-8A0A0A6YYG3 113 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 TRAV22A0A0B4J277 110 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 TRBV10-1A0A0K0K1A3 114 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 C19orf71A6NCJ1 209 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 D6R8Y8 96 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 F8WEM9 126 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 PSCAO43653 123 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 IGLV1-51P01701 117 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 CGB3P0DN86 165 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 CGB7P0DN87 165 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 FAM27BQ5VT28 67 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 LYPD5Q6UWN5 251 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 Q6ZR03 302 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 NTM-AS1Q6ZSK4 140 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 MUSTN1Q8IVN3 82 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 Q8IYB0 196 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 CLECL1Q8IZS7 167 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 FAM19A2Q8N3H0 131 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 ALS2Q96Q42 1657 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 SCN3AQ9NY46 2000 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 HIVEP2P31629 2446 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 EXPH5Q8NEV8 1989 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 GPATCH8Q9UKJ3 1502 aaKnown RBP2.52□□□□□ -2.01
VPS8-224ENST00000488255 BTAF1O14981 1849 aa2.52□□□□□ -2.01
VPS8-224ENST00000488255 KDM3BQ7LBC6 1761 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 SNRNP200O75643 2136 aaKnown RBP2.51□□□□□ -2.01
VPS8-224ENST00000488255 PTPRDP23468 1912 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 IGLV2-18A0A075B6J9 118 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 TRAV1-2A0A0B4J238 106 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 C16orf90A8MZG2 172 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 C5orf67F2Z3F1 127 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 LHBP01229 141 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 ERHP84090 104 aaKnown RBP2.51□□□□□ -2.01
VPS8-224ENST00000488255 NNATQ16517 81 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 C15orf56Q8N910 161 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 SPANXA2-OT1Q8N9U9 137 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 LINC00574Q9H8X3 128 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 LENEPQ9Y5L5 61 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 CDC42BPGQ6DT37 1551 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 CPS1P31327 1500 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 CRYBG1Q9Y4K1 1723 aa2.51□□□□□ -2.01
VPS8-224ENST00000488255 USP32Q8NFA0 1604 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 DOCK11Q5JSL3 2073 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 TRAV12-3A0A0B4J271 114 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 H3BQ85 93 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 SNRPGP62308 76 aaKnown RBP2.5□□□□□ -2.01
VPS8-224ENST00000488255 MIR22HGQ0VDD5 57 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 FAM223AQ8IWN6 122 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 DMAC1Q96GE9 116 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 TMEM14BQ9NUH8 114 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 UBE2D4Q9Y2X8 147 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 AGLP35573 1532 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 TET3O43151 1660 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 PLCH1Q4KWH8 1693 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 KIAA2026Q5HYC2 2103 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 TANC1Q9C0D5 1861 aa2.5□□□□□ -2.01
VPS8-224ENST00000488255 CICQ96RK0 1608 aaPredicted RBP2.5□□□□□ -2.01
VPS8-224ENST00000488255 SIPA1L3O60292 1781 aaPredicted RBP2.49□□□□□ -2.01
VPS8-224ENST00000488255 SLIT2O94813 1529 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 NEXMIFQ5QGS0 1516 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 TRBV30A0A0K0K1B3 111 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 LOC101927531A0A1B0GV80 90 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 C11orf86A6NJI1 115 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 DNAL4O96015 105 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 TLX1NBP0CAT3 122 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 KPRPQ5T749 579 aaPredicted RBP2.49□□□□□ -2.01
VPS8-224ENST00000488255 CIRBP-AS1Q8TBR5 109 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 HIGD2AQ9BW72 106 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 ORMDL1Q9P0S3 153 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 TRPM7Q96QT4 1865 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 CLTCL1P53675 1640 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 DSCAMO60469 2012 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 ARFGEF2Q9Y6D5 1785 aa2.49□□□□□ -2.01
VPS8-224ENST00000488255 TEX49A0A1B0GTD5 131 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 LINC01549A6NIU2 74 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 C17orf98A8MV24 154 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 IGHV3-33P01772 117 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 CISD3P0C7P0 127 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 ARMS2P0C7Q2 107 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 UBE2D1P51668 147 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.48□□□□□ -2.01
VPS8-224ENST00000488255 TMEM105Q8N8V8 129 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 C1orf64Q8NEQ6 169 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 CDC42SE2Q9NRR3 84 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 R4GMQ9 66 aa2.48□□□□□ -2.01
VPS8-224ENST00000488255 ADGRB2O60241 1585 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms