RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 HSD52Q0P140 79 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 KLK9Q2XQG4 91 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 DEFB116Q30KQ4 102 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 PYDC2Q56P42 97 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 Q5BKY6 102 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 CENPWQ5EE01 88 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 RNASE13Q5GAN3 156 aaKnown RBP2.13□□□□□ -2.07
GPNMB-212ENST00000487890 FAM222AQ5U5X8 452 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 LINC00322Q6ZN03 302 aaPredicted RBP2.13□□□□□ -2.07
GPNMB-212ENST00000487890 GTF2H5Q6ZYL4 71 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 FAM19A3Q7Z5A8 133 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 FER1L6-AS1Q8NA97 138 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 C5orf17Q8NAS9 161 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 OR4C16Q8NGL9 310 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 CIRBP-AS1Q8TBR5 109 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 NAA60Q9H7X0 242 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 SPANXCQ9NY87 97 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 NAT8Q9UHE5 227 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 KLK9Q9UKQ9 250 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 HYDINQ4G0P3 5121 aa2.13□□□□□ -2.07
GPNMB-212ENST00000487890 C7orf71A4D174 169 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 CRYM-AS1A6NIL9 109 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 IGLL5B9A064 214 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 GSTZ1O43708 216 aaPredicted RBP2.12□□□□□ -2.07
GPNMB-212ENST00000487890 DEDDO75618 318 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 IGKV1-17P01599 117 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 HLA-DQA1P01909 254 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 IL4P05112 153 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 INAFM2P0DMQ5 153 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 IAPPP10997 89 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 FAUP35544 74 aaKnown RBP2.12□□□□□ -2.07
GPNMB-212ENST00000487890 INPP1P49441 399 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 KRTAP10-12P60413 245 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 SNRPD3P62318 126 aaKnown RBP2.12□□□□□ -2.07
GPNMB-212ENST00000487890 MEF2BQ02080 365 aaPredicted RBP2.12□□□□□ -2.07
GPNMB-212ENST00000487890 SSBP1Q04837 148 aaKnown RBP2.12□□□□□ -2.07
GPNMB-212ENST00000487890 PSMG4Q5JS54 123 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 CLLU1Q5K131 121 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 SCGB1D4Q6XE38 83 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 PRNTQ86SH4 94 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 LHFPL1Q86WI0 220 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 TMEM256Q8N2U0 113 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 RAB2BQ8WUD1 216 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 SMIM4Q8WVI0 70 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 DEDD2Q8WXF8 326 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 AP1S3Q96PC3 154 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 DERL1Q9BUN8 251 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 MRPL36Q9P0J6 103 aaKnown RBP2.12□□□□□ -2.07
GPNMB-212ENST00000487890 PKHD1P08F94 4074 aa2.12□□□□□ -2.07
GPNMB-212ENST00000487890 BIRC6Q9NR09 4857 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 TRAV4A0A0B4J268 109 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 TMEM223A0PJW6 202 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 KLLNB2CW77 178 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 GZMBP10144 247 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 SLC25A4P12235 298 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 IL7P13232 177 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 HTN3P15516 51 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 CRYBB3P26998 211 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 TMBIM6P55061 237 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 FXYD7P58549 80 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 DAD1P61803 113 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 AKR1C1Q04828 323 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 C2orf83Q53S99 150 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 MEIG1Q5JSS6 88 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 Q6ZRU5 148 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 LYZL2Q7Z4W2 148 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 ZNF664Q8N3J9 261 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 RPP25LQ8N5L8 163 aaKnown RBP2.11□□□□□ -2.07
GPNMB-212ENST00000487890 CYB561D1Q8N8Q1 229 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 TMEM75Q8N9X5 138 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 TMEM70Q9BUB7 260 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 C11orf68Q9H3H3 251 aaKnown RBP2.11□□□□□ -2.07
GPNMB-212ENST00000487890 CACFD1Q9UGQ2 172 aa2.11□□□□□ -2.07
GPNMB-212ENST00000487890 TRAV8-3A0A0A6YYJ7 113 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 TRAV2A0A0B4J234 112 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 TRAV5A0A0B4J249 113 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 PIGBOS1A0A0B4J2F0 54 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 FAM236AA0A1B0GUQ0 79 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 FAM236BA0A1B0GV22 79 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 ISLRO14498 428 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 SSSCA1O60232 199 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 DPM2O94777 84 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 IFNA7P01567 189 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 GPX1P07203 203 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 IGLC1P0CG04 106 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 ATP6V0CP27449 155 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 HLA-DMBP28068 263 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 NDUFA6P56556 154 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 DEFB1P60022 68 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 YPEL3P61236 119 aaPredicted RBP2.1□□□□□ -2.07
GPNMB-212ENST00000487890 HERVK_113P63121 156 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 ZNF90Q03938 601 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 NMSQ5H8A3 153 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 SPANXN5Q5MJ07 72 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 EBLN2Q6P2I7 272 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 MORN3Q6PF18 240 aaPredicted RBP2.1□□□□□ -2.07
GPNMB-212ENST00000487890 UBE2DNLQ8IWF7 75 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 TOMM5Q8N4H5 51 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 Q8NAQ8 132 aa2.1□□□□□ -2.07
GPNMB-212ENST00000487890 OR4B1Q8NGF8 309 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms