RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 FAM104BQ5XKR9 115 aa8.23□□□□□ -1.09
SFXN3-206ENST00000487721 Q6ZRN7 208 aaPredicted RBP8.23□□□□□ -1.09
SFXN3-206ENST00000487721 NIT1Q86X76 327 aa8.23□□□□□ -1.09
SFXN3-206ENST00000487721 RMI2Q96E14 147 aa8.23□□□□□ -1.09
SFXN3-206ENST00000487721 CHCHD5Q9BSY4 110 aa8.23□□□□□ -1.09
SFXN3-206ENST00000487721 Q9HAA7 133 aa8.23□□□□□ -1.09
SFXN3-206ENST00000487721 TRBV25-1A0A075B6N4 114 aa8.22□□□□□ -1.09
SFXN3-206ENST00000487721 MRPL51Q4U2R6 128 aaKnown RBP8.22□□□□□ -1.09
SFXN3-206ENST00000487721 SPATA12Q7Z6I5 190 aa8.22□□□□□ -1.09
SFXN3-206ENST00000487721 RPL39LQ96EH5 51 aaKnown RBP8.22□□□□□ -1.09
SFXN3-206ENST00000487721 COX11Q9Y6N1 276 aa8.22□□□□□ -1.09
SFXN3-206ENST00000487721 PKD1P98161 4303 aa8.22□□□□□ -1.09
SFXN3-206ENST00000487721 IGHV1-24A0A0C4DH33 117 aa8.21□□□□□ -1.1
SFXN3-206ENST00000487721 C16orf90A8MZG2 172 aa8.21□□□□□ -1.1
SFXN3-206ENST00000487721 NCR2O95944 276 aa8.21□□□□□ -1.1
SFXN3-206ENST00000487721 MRAP2Q96G30 205 aa8.21□□□□□ -1.1
SFXN3-206ENST00000487721 SMKR1H3BMG3 65 aa8.2□□□□□ -1.1
SFXN3-206ENST00000487721 GAS8-AS1O95177 125 aa8.2□□□□□ -1.1
SFXN3-206ENST00000487721 Q0VG73 95 aa8.2□□□□□ -1.1
SFXN3-206ENST00000487721 PGPEP1Q9NXJ5 209 aa8.2□□□□□ -1.1
SFXN3-206ENST00000487721 DNAH11Q96DT5 4516 aa8.19□□□□□ -1.1
SFXN3-206ENST00000487721 TGIF2-C20orf24A0A0A6YYL0 155 aa8.19□□□□□ -1.1
SFXN3-206ENST00000487721 CRPP02741 224 aa8.19□□□□□ -1.1
SFXN3-206ENST00000487721 COTL1Q14019 142 aa8.19□□□□□ -1.1
SFXN3-206ENST00000487721 IQCJQ1A5X6 159 aa8.19□□□□□ -1.1
SFXN3-206ENST00000487721 TMEM136Q6ZRR5 245 aa8.19□□□□□ -1.1
SFXN3-206ENST00000487721 CBLN2Q8IUK8 224 aa8.19□□□□□ -1.1
SFXN3-206ENST00000487721 SMCO4Q9NRQ5 59 aa8.19□□□□□ -1.1
SFXN3-206ENST00000487721 KLK12Q9UKR0 248 aa8.19□□□□□ -1.1
SFXN3-206ENST00000487721 A0A087WTM6 91 aa8.18□□□□□ -1.1
SFXN3-206ENST00000487721 D6R8Y8 96 aa8.18□□□□□ -1.1
SFXN3-206ENST00000487721 UBE2L6O14933 153 aa8.18□□□□□ -1.1
SFXN3-206ENST00000487721 ATP6V1G1O75348 118 aa8.18□□□□□ -1.1
SFXN3-206ENST00000487721 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
SFXN3-206ENST00000487721 CKS2P33552 79 aa8.18□□□□□ -1.1
SFXN3-206ENST00000487721 RPS10P46783 165 aaKnown RBP8.18□□□□□ -1.1
SFXN3-206ENST00000487721 COX19Q49B96 90 aa8.18□□□□□ -1.1
SFXN3-206ENST00000487721 Q8N3U1 123 aa8.18□□□□□ -1.1
SFXN3-206ENST00000487721 UBE2WQ96B02 151 aa8.18□□□□□ -1.1
SFXN3-206ENST00000487721 TMEM243Q9BU79 118 aa8.18□□□□□ -1.1
SFXN3-206ENST00000487721 TRBV24-1A0A075B6N3 115 aa8.17□□□□□ -1.1
SFXN3-206ENST00000487721 IGKV2D-24A0A075B6R9 120 aa8.17□□□□□ -1.1
SFXN3-206ENST00000487721 TRBV6-5A0A0K0K1A5 114 aa8.17□□□□□ -1.1
SFXN3-206ENST00000487721 PPP1R17O96001 155 aa8.17□□□□□ -1.1
SFXN3-206ENST00000487721 HLA-DQA1P01909 254 aa8.17□□□□□ -1.1
SFXN3-206ENST00000487721 ANGP03950 147 aaKnown RBP8.17□□□□□ -1.1
SFXN3-206ENST00000487721 GAGE6Q13070 117 aa8.17□□□□□ -1.1
SFXN3-206ENST00000487721 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
SFXN3-206ENST00000487721 NTM-AS1Q6ZSK4 140 aa8.17□□□□□ -1.1
SFXN3-206ENST00000487721 NRACQ8N912 160 aa8.17□□□□□ -1.1
SFXN3-206ENST00000487721 ST20Q9HBF5 79 aa8.17□□□□□ -1.1
SFXN3-206ENST00000487721 DYNC1H1Q14204 4646 aaKnown RBP8.17□□□□□ -1.1
SFXN3-206ENST00000487721 SDHAF1A6NFY7 115 aa8.16□□□□□ -1.1
SFXN3-206ENST00000487721 PPBPP02775 128 aa8.16□□□□□ -1.1
SFXN3-206ENST00000487721 MT-ND6P03923 174 aa8.16□□□□□ -1.1
SFXN3-206ENST00000487721 AMTP48728 403 aa8.16□□□□□ -1.1
SFXN3-206ENST00000487721 MPV17L2Q567V2 206 aa8.16□□□□□ -1.1
SFXN3-206ENST00000487721 ORMDL3Q8N138 153 aa8.16□□□□□ -1.1
SFXN3-206ENST00000487721 MAPKAPK5-AS1Q8N8E1 139 aa8.16□□□□□ -1.1
SFXN3-206ENST00000487721 YPEL4Q96NS1 127 aa8.16□□□□□ -1.1
SFXN3-206ENST00000487721 GNB1LQ9BYB4 327 aa8.16□□□□□ -1.1
SFXN3-206ENST00000487721 I3L3M4 83 aa8.15□□□□□ -1.1
SFXN3-206ENST00000487721 APCSP02743 223 aa8.15□□□□□ -1.1
SFXN3-206ENST00000487721 PMCHP20382 165 aa8.15□□□□□ -1.1
SFXN3-206ENST00000487721 KRTAP10-2P60368 255 aa8.15□□□□□ -1.1
SFXN3-206ENST00000487721 RBX1P62877 108 aa8.15□□□□□ -1.1
SFXN3-206ENST00000487721 PRELID3AQ96N28 172 aa8.15□□□□□ -1.1
SFXN3-206ENST00000487721 C1orf43Q9BWL3 253 aa8.15□□□□□ -1.1
SFXN3-206ENST00000487721 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
SFXN3-206ENST00000487721 SCO1O75880 301 aa8.14□□□□□ -1.11
SFXN3-206ENST00000487721 TNFRSF6BO95407 300 aa8.14□□□□□ -1.11
SFXN3-206ENST00000487721 NPYP01303 97 aa8.14□□□□□ -1.11
SFXN3-206ENST00000487721 S100A1P23297 94 aa8.14□□□□□ -1.11
SFXN3-206ENST00000487721 SUMO2P61956 95 aaKnown RBP8.14□□□□□ -1.11
SFXN3-206ENST00000487721 MIAQ16674 131 aa8.14□□□□□ -1.11
SFXN3-206ENST00000487721 KIAA1644Q3SXP7 199 aa8.14□□□□□ -1.11
SFXN3-206ENST00000487721 Q8N976 141 aa8.14□□□□□ -1.11
SFXN3-206ENST00000487721 DEFB104AQ8WTQ1 72 aa8.14□□□□□ -1.11
SFXN3-206ENST00000487721 NTN5Q8WTR8 489 aaPredicted RBP8.14□□□□□ -1.11
SFXN3-206ENST00000487721 TMEM70Q9BUB7 260 aa8.14□□□□□ -1.11
SFXN3-206ENST00000487721 MRPL18Q9H0U6 180 aaKnown RBP8.14□□□□□ -1.11
SFXN3-206ENST00000487721 A0A1B0GUV1 79 aa8.13□□□□□ -1.11
SFXN3-206ENST00000487721 PHOX2AO14813 284 aa8.13□□□□□ -1.11
SFXN3-206ENST00000487721 POLR2KP53803 58 aaKnown RBP8.13□□□□□ -1.11
SFXN3-206ENST00000487721 AMMECR1LQ6DCA0 310 aa8.13□□□□□ -1.11
SFXN3-206ENST00000487721 C20orf78Q9BR46 151 aa8.13□□□□□ -1.11
SFXN3-206ENST00000487721 LAMTOR2Q9Y2Q5 125 aa8.13□□□□□ -1.11
SFXN3-206ENST00000487721 TRAPPC1Q9Y5R8 145 aa8.13□□□□□ -1.11
SFXN3-206ENST00000487721 LRCOL1A6NCL2 159 aa8.12□□□□□ -1.11
SFXN3-206ENST00000487721 H7C423 109 aa8.12□□□□□ -1.11
SFXN3-206ENST00000487721 FABP9Q0Z7S8 132 aa8.12□□□□□ -1.11
SFXN3-206ENST00000487721 Q8N1X5 172 aa8.12□□□□□ -1.11
SFXN3-206ENST00000487721 LINC00269Q8N2A0 174 aa8.12□□□□□ -1.11
SFXN3-206ENST00000487721 Q8N814 137 aa8.12□□□□□ -1.11
SFXN3-206ENST00000487721 SMIM2Q9BVW6 85 aa8.12□□□□□ -1.11
SFXN3-206ENST00000487721 IGLV5-52A0A0A0MRZ9 124 aa8.11□□□□□ -1.11
SFXN3-206ENST00000487721 TRBV27A0A0K0K1C4 114 aa8.11□□□□□ -1.11
SFXN3-206ENST00000487721 VCYO14598 125 aa8.11□□□□□ -1.11
SFXN3-206ENST00000487721 ENHOQ6UWT2 76 aa8.11□□□□□ -1.11
SFXN3-206ENST00000487721 MAP1LC3AQ9H492 121 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms