RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 FAT1Q14517 4588 aa7.51□□□□□ -1.21
SPEN-205ENST00000487496 TRAV26-2A0A0B4J265 109 aa7.5□□□□□ -1.21
SPEN-205ENST00000487496 ZNF727A8MUV8 499 aa7.5□□□□□ -1.21
SPEN-205ENST00000487496 FOXA3P55318 350 aaPredicted RBP7.5□□□□□ -1.21
SPEN-205ENST00000487496 Q5VSD8 79 aa7.5□□□□□ -1.21
SPEN-205ENST00000487496 SMIM15Q7Z3B0 74 aa7.5□□□□□ -1.21
SPEN-205ENST00000487496 LINC01551Q86U37 167 aa7.5□□□□□ -1.21
SPEN-205ENST00000487496 DEFB104AQ8WTQ1 72 aa7.5□□□□□ -1.21
SPEN-205ENST00000487496 PGLYRP4Q96LB8 373 aa7.5□□□□□ -1.21
SPEN-205ENST00000487496 TMEM243Q9BU79 118 aa7.5□□□□□ -1.21
SPEN-205ENST00000487496 LINC01620Q4KN68 170 aa7.49□□□□□ -1.21
SPEN-205ENST00000487496 CLPSL2Q6UWE3 100 aa7.49□□□□□ -1.21
SPEN-205ENST00000487496 Q6ZSA8 131 aa7.49□□□□□ -1.21
SPEN-205ENST00000487496 C20orf203Q8NBC4 194 aa7.49□□□□□ -1.21
SPEN-205ENST00000487496 A0A1B0GUV1 79 aa7.48□□□□□ -1.21
SPEN-205ENST00000487496 REG3AQ06141 175 aa7.48□□□□□ -1.21
SPEN-205ENST00000487496 COTL1Q14019 142 aa7.48□□□□□ -1.21
SPEN-205ENST00000487496 C14orf177Q52M58 125 aa7.48□□□□□ -1.21
SPEN-205ENST00000487496 KRTAP26-1Q6PEX3 210 aa7.48□□□□□ -1.21
SPEN-205ENST00000487496 RPL39LQ96EH5 51 aaKnown RBP7.48□□□□□ -1.21
SPEN-205ENST00000487496 OSTCQ9NRP0 149 aa7.48□□□□□ -1.21
SPEN-205ENST00000487496 IGLV4-60A0A075B6I1 120 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 HIGD1CA8MV81 97 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 USP17L23D6RBM5 183 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 HLA-DQA1P01909 254 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 INAFM2P0DMQ5 153 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 AMTP48728 403 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 ANKRD39Q53RE8 183 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 TEX261Q6UWH6 196 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 TSKUQ8WUA8 353 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 BORCS7Q96B45 105 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 GFRA4Q9GZZ7 299 aa7.47□□□□□ -1.21
SPEN-205ENST00000487496 A0A1B0GUT8 65 aa7.46□□□□□ -1.22
SPEN-205ENST00000487496 FAM231BA6NCW3 169 aa7.46□□□□□ -1.22
SPEN-205ENST00000487496 C9JQL5 133 aa7.46□□□□□ -1.22
SPEN-205ENST00000487496 FAM229AH3BQW9 127 aa7.46□□□□□ -1.22
SPEN-205ENST00000487496 UBE2L6O14933 153 aa7.46□□□□□ -1.22
SPEN-205ENST00000487496 GHRHP01286 108 aa7.46□□□□□ -1.22
SPEN-205ENST00000487496 VPS13BQ7Z7G8 4022 aa7.46□□□□□ -1.22
SPEN-205ENST00000487496 IGLV10-54A0A075B6I4 117 aa7.45□□□□□ -1.22
SPEN-205ENST00000487496 SDHAF1A6NFY7 115 aa7.45□□□□□ -1.22
SPEN-205ENST00000487496 GAS8-AS1O95177 125 aa7.45□□□□□ -1.22
SPEN-205ENST00000487496 PRSS1P07477 247 aa7.45□□□□□ -1.22
SPEN-205ENST00000487496 SRSF3P84103 164 aaKnown RBP7.45□□□□□ -1.22
SPEN-205ENST00000487496 TMEM241Q24JQ0 296 aa7.45□□□□□ -1.22
SPEN-205ENST00000487496 FAM74A3Q4VXF1 159 aa7.45□□□□□ -1.22
SPEN-205ENST00000487496 TMEM191AQ9H0A3 160 aa7.45□□□□□ -1.22
SPEN-205ENST00000487496 V9GYV3 84 aa7.45□□□□□ -1.22
SPEN-205ENST00000487496 TRAV8-4A0A0B4J246 113 aa7.44□□□□□ -1.22
SPEN-205ENST00000487496 TRBV6-5A0A0K0K1A5 114 aa7.44□□□□□ -1.22
SPEN-205ENST00000487496 NCR2O95944 276 aa7.44□□□□□ -1.22
SPEN-205ENST00000487496 RPL23P62829 140 aaKnown RBP7.44□□□□□ -1.22
SPEN-205ENST00000487496 SCXQ7RTU7 201 aa7.44□□□□□ -1.22
SPEN-205ENST00000487496 ISOC2Q96AB3 205 aa7.44□□□□□ -1.22
SPEN-205ENST00000487496 I3L3M4 83 aa7.43□□□□□ -1.22
SPEN-205ENST00000487496 EIF4EBP3O60516 100 aaPredicted RBP7.43□□□□□ -1.22
SPEN-205ENST00000487496 RAB4AP20338 218 aa7.43□□□□□ -1.22
SPEN-205ENST00000487496 PEA15Q15121 130 aa7.43□□□□□ -1.22
SPEN-205ENST00000487496 DGAT2L7PQ6IED9 249 aa7.43□□□□□ -1.22
SPEN-205ENST00000487496 NUP35Q8NFH5 326 aa7.43□□□□□ -1.22
SPEN-205ENST00000487496 RNF185Q96GF1 192 aa7.43□□□□□ -1.22
SPEN-205ENST00000487496 CHAC1Q9BUX1 264 aa7.43□□□□□ -1.22
SPEN-205ENST00000487496 NAT8Q9UHE5 227 aa7.43□□□□□ -1.22
SPEN-205ENST00000487496 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.42□□□□□ -1.22
SPEN-205ENST00000487496 IGKV2-29A2NJV5 120 aaPredicted RBP7.42□□□□□ -1.22
SPEN-205ENST00000487496 H7C423 109 aa7.42□□□□□ -1.22
SPEN-205ENST00000487496 APCSP02743 223 aa7.42□□□□□ -1.22
SPEN-205ENST00000487496 PMCHP20382 165 aa7.42□□□□□ -1.22
SPEN-205ENST00000487496 RIGQ13278 110 aa7.42□□□□□ -1.22
SPEN-205ENST00000487496 ADIRFQ15847 76 aa7.42□□□□□ -1.22
SPEN-205ENST00000487496 AMN1Q8IY45 258 aa7.42□□□□□ -1.22
SPEN-205ENST00000487496 SMDT1Q9H4I9 107 aa7.42□□□□□ -1.22
SPEN-205ENST00000487496 ST20Q9HBF5 79 aa7.42□□□□□ -1.22
SPEN-205ENST00000487496 RPS10P46783 165 aaKnown RBP7.41□□□□□ -1.22
SPEN-205ENST00000487496 AMMECR1LQ6DCA0 310 aa7.41□□□□□ -1.22
SPEN-205ENST00000487496 LINC00528Q8N1L1 170 aa7.41□□□□□ -1.22
SPEN-205ENST00000487496 C9orf163Q8N9P6 203 aa7.41□□□□□ -1.22
SPEN-205ENST00000487496 MRAP2Q96G30 205 aa7.41□□□□□ -1.22
SPEN-205ENST00000487496 NAT8BQ9UHF3 227 aa7.41□□□□□ -1.22
SPEN-205ENST00000487496 IGKV3OR2-268A0A0C4DH90 116 aa7.4□□□□□ -1.22
SPEN-205ENST00000487496 TSHBP01222 138 aa7.4□□□□□ -1.22
SPEN-205ENST00000487496 FGF6P10767 208 aa7.4□□□□□ -1.22
SPEN-205ENST00000487496 ESDP10768 282 aa7.4□□□□□ -1.22
SPEN-205ENST00000487496 POLR2KP53803 58 aaKnown RBP7.4□□□□□ -1.22
SPEN-205ENST00000487496 RNASEKQ6P5S7 137 aaKnown RBP7.4□□□□□ -1.22
SPEN-205ENST00000487496 CIRBP-AS1Q8TBR5 109 aa7.4□□□□□ -1.22
SPEN-205ENST00000487496 TRBV27A0A0K0K1C4 114 aa7.39□□□□□ -1.23
SPEN-205ENST00000487496 SMIM27A0A1W2PRY6 76 aa7.39□□□□□ -1.23
SPEN-205ENST00000487496 hDV102S1A0JD36 115 aa7.39□□□□□ -1.23
SPEN-205ENST00000487496 GAGE12HA6NDE8 117 aa7.39□□□□□ -1.23
SPEN-205ENST00000487496 SMKR1H3BMG3 65 aa7.39□□□□□ -1.23
SPEN-205ENST00000487496 PLA2G1BP04054 148 aaKnown RBP7.39□□□□□ -1.23
SPEN-205ENST00000487496 TMEM242Q9NWH2 141 aa7.39□□□□□ -1.23
SPEN-205ENST00000487496 FLG2Q5D862 2391 aaPredicted RBP7.38□□□□□ -1.23
SPEN-205ENST00000487496 ZNF25P17030 456 aaPredicted RBP7.38□□□□□ -1.23
SPEN-205ENST00000487496 CNBPP62633 177 aaKnown RBP7.38□□□□□ -1.23
SPEN-205ENST00000487496 NRACQ8N912 160 aa7.38□□□□□ -1.23
SPEN-205ENST00000487496 SRRM2Q9UQ35 2752 aaKnown RBP7.37□□□□□ -1.23
SPEN-205ENST00000487496 VCYO14598 125 aa7.37□□□□□ -1.23
SPEN-205ENST00000487496 PPP1R17O96001 155 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms