RNA–Protein interactions for RNA: ENST00000487475.5

PSMD2-215, Transcript of proteasome 26S subunit, non-ATPase 2, human

TSL 2

Gene PSMD2, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD2-215	ENST00000487475	KRTAP10-4	P60372	401 aa	Predicted RBP	11.18	□□□□□ -0.62
PSMD2-215	ENST00000487475	C9orf163	Q8N9P6	203 aa		11.18	□□□□□ -0.62
PSMD2-215	ENST00000487475	GFRA4	Q9GZZ7	299 aa		11.18	□□□□□ -0.62
PSMD2-215	ENST00000487475	TRAV8-4	A0A0B4J246	113 aa		11.17	□□□□□ -0.62
PSMD2-215	ENST00000487475	TRAV26-2	A0A0B4J265	109 aa		11.17	□□□□□ -0.62
PSMD2-215	ENST00000487475	UBE2L6	O14933	153 aa		11.17	□□□□□ -0.62
PSMD2-215	ENST00000487475	AMT	P48728	403 aa		11.17	□□□□□ -0.62
PSMD2-215	ENST00000487475	COTL1	Q14019	142 aa		11.17	□□□□□ -0.62
PSMD2-215	ENST00000487475	AKAP14	Q86UN6	197 aa		11.17	□□□□□ -0.62
PSMD2-215	ENST00000487475	GATD1	Q8NB37	220 aa		11.17	□□□□□ -0.62
PSMD2-215	ENST00000487475	GTSF1	Q8WW33	167 aa		11.17	□□□□□ -0.62
PSMD2-215	ENST00000487475	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.16	□□□□□ -0.62
PSMD2-215	ENST00000487475	ALKAL2	Q6UX46	152 aa		11.16	□□□□□ -0.62
PSMD2-215	ENST00000487475	CLRN3	Q8NCR9	226 aa		11.16	□□□□□ -0.62
PSMD2-215	ENST00000487475	hDV102S1	A0JD36	115 aa		11.14	□□□□□ -0.63
PSMD2-215	ENST00000487475	TMEM250	H0YL14	139 aa		11.14	□□□□□ -0.63
PSMD2-215	ENST00000487475	FOXA3	P55318	350 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD2-215	ENST00000487475	BLOC1S1	P78537	153 aa		11.14	□□□□□ -0.63
PSMD2-215	ENST00000487475	RPL39L	Q96EH5	51 aa	Known RBP	11.14	□□□□□ -0.63
PSMD2-215	ENST00000487475	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.14	□□□□□ -0.63
PSMD2-215	ENST00000487475	hCG_2014768	A0A024R1R8	64 aa		11.13	□□□□□ -0.63
PSMD2-215	ENST00000487475	GATC	O43716	136 aa	Known RBP	11.13	□□□□□ -0.63
PSMD2-215	ENST00000487475	SDIM1	Q6ZPB5	146 aa		11.13	□□□□□ -0.63
PSMD2-215	ENST00000487475	SMIM15	Q7Z3B0	74 aa		11.13	□□□□□ -0.63
PSMD2-215	ENST00000487475	PANO1	I0J062	215 aa		11.12	□□□□□ -0.63
PSMD2-215	ENST00000487475	CEBPG	P53567	150 aa		11.12	□□□□□ -0.63
PSMD2-215	ENST00000487475	CNBP	P62633	177 aa	Known RBP	11.12	□□□□□ -0.63
PSMD2-215	ENST00000487475	LYPD6B	Q8NI32	183 aa		11.12	□□□□□ -0.63
PSMD2-215	ENST00000487475	RPL37A	P61513	92 aa	Known RBP	11.11	□□□□□ -0.63
PSMD2-215	ENST00000487475	FAM231D	Q6ZW35	169 aa		11.11	□□□□□ -0.63
PSMD2-215	ENST00000487475	IGKV3OR2-268	A0A0C4DH90	116 aa		11.1	□□□□□ -0.63
PSMD2-215	ENST00000487475		A8MWL6	223 aa		11.1	□□□□□ -0.63
PSMD2-215	ENST00000487475	NCR2	O95944	276 aa		11.1	□□□□□ -0.63
PSMD2-215	ENST00000487475	TEX261	Q6UWH6	196 aa		11.1	□□□□□ -0.63
PSMD2-215	ENST00000487475	AP5S1	Q9NUS5	200 aa		11.1	□□□□□ -0.63
PSMD2-215	ENST00000487475	LRP1	Q07954	4544 aa	Known RBP	11.1	□□□□□ -0.63
PSMD2-215	ENST00000487475	GAGE12H	A6NDE8	117 aa		11.09	□□□□□ -0.63
PSMD2-215	ENST00000487475	SLPI	P03973	132 aa		11.09	□□□□□ -0.63
PSMD2-215	ENST00000487475	AMMECR1L	Q6DCA0	310 aa		11.09	□□□□□ -0.63
PSMD2-215	ENST00000487475	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.08	□□□□□ -0.64
PSMD2-215	ENST00000487475	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.08	□□□□□ -0.64
PSMD2-215	ENST00000487475	SDHAF1	A6NFY7	115 aa		11.08	□□□□□ -0.64
PSMD2-215	ENST00000487475	APCS	P02743	223 aa		11.08	□□□□□ -0.64
PSMD2-215	ENST00000487475	CT83	Q5H943	113 aa		11.08	□□□□□ -0.64
PSMD2-215	ENST00000487475	RNASEK	Q6P5S7	137 aa	Known RBP	11.08	□□□□□ -0.64
PSMD2-215	ENST00000487475	IGHV3-64	A0A075B6Q5	118 aa		11.07	□□□□□ -0.64
PSMD2-215	ENST00000487475	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.07	□□□□□ -0.64
PSMD2-215	ENST00000487475	BORCS7	Q96B45	105 aa		11.07	□□□□□ -0.64
PSMD2-215	ENST00000487475	SMIM7	Q9BQ49	75 aa		11.07	□□□□□ -0.64
PSMD2-215	ENST00000487475	EIF5A2	Q9GZV4	153 aa	Known RBP	11.07	□□□□□ -0.64
PSMD2-215	ENST00000487475		H7C423	109 aa		11.06	□□□□□ -0.64
PSMD2-215	ENST00000487475	OXT	P01178	125 aa		11.06	□□□□□ -0.64
PSMD2-215	ENST00000487475	FGF6	P10767	208 aa		11.06	□□□□□ -0.64
PSMD2-215	ENST00000487475	CIRBP	Q14011	172 aa	Known RBP	11.06	□□□□□ -0.64
PSMD2-215	ENST00000487475	C15orf56	Q8N910	161 aa		11.06	□□□□□ -0.64
PSMD2-215	ENST00000487475	TRBV6-5	A0A0K0K1A5	114 aa		11.05	□□□□□ -0.64
PSMD2-215	ENST00000487475		I3L3M4	83 aa		11.05	□□□□□ -0.64
PSMD2-215	ENST00000487475	GAS8-AS1	O95177	125 aa		11.05	□□□□□ -0.64
PSMD2-215	ENST00000487475	PMCH	P20382	165 aa		11.05	□□□□□ -0.64
PSMD2-215	ENST00000487475	HNRNPA3	P51991	378 aa	Known RBP	11.05	□□□□□ -0.64
PSMD2-215	ENST00000487475	CFAP161	Q6P656	301 aa		11.05	□□□□□ -0.64
PSMD2-215	ENST00000487475	LINC01551	Q86U37	167 aa		11.05	□□□□□ -0.64
PSMD2-215	ENST00000487475	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.05	□□□□□ -0.64
PSMD2-215	ENST00000487475	DPH3	Q96FX2	82 aa		11.05	□□□□□ -0.64
PSMD2-215	ENST00000487475	FAM231B	A6NCW3	169 aa		11.04	□□□□□ -0.64
PSMD2-215	ENST00000487475	ZNF727	A8MUV8	499 aa		11.04	□□□□□ -0.64
PSMD2-215	ENST00000487475	HIGD1C	A8MV81	97 aa		11.04	□□□□□ -0.64
PSMD2-215	ENST00000487475	CHTF8	P0CG12	524 aa		11.04	□□□□□ -0.64
PSMD2-215	ENST00000487475	TSKU	Q8WUA8	353 aa		11.04	□□□□□ -0.64
PSMD2-215	ENST00000487475		A0A1B0GUT8	65 aa		11.03	□□□□□ -0.64
PSMD2-215	ENST00000487475	NDUFS6	O75380	124 aa	Known RBP	11.03	□□□□□ -0.64
PSMD2-215	ENST00000487475	HIGD2B	Q4VC39	106 aa		11.03	□□□□□ -0.64
PSMD2-215	ENST00000487475	FAM210A	Q96ND0	272 aa		11.03	□□□□□ -0.64
PSMD2-215	ENST00000487475	ST20	Q9HBF5	79 aa		11.03	□□□□□ -0.64
PSMD2-215	ENST00000487475	FAT3	Q8TDW7	4589 aa		11.03	□□□□□ -0.64
PSMD2-215	ENST00000487475	PKHD1L1	Q86WI1	4243 aa		11.03	□□□□□ -0.64
PSMD2-215	ENST00000487475	TSHB	P01222	138 aa		11.02	□□□□□ -0.65
PSMD2-215	ENST00000487475	SRP19	P09132	144 aa	Known RBP	11.02	□□□□□ -0.65
PSMD2-215	ENST00000487475	ZNF25	P17030	456 aa	Predicted RBP	11.02	□□□□□ -0.65
PSMD2-215	ENST00000487475	TMEM191A	Q9H0A3	160 aa		11.02	□□□□□ -0.65
PSMD2-215	ENST00000487475	OSTC	Q9NRP0	149 aa		11.02	□□□□□ -0.65
PSMD2-215	ENST00000487475		A0A087WYN8	130 aa		11.01	□□□□□ -0.65
PSMD2-215	ENST00000487475	ESD	P10768	282 aa		11.01	□□□□□ -0.65
PSMD2-215	ENST00000487475	SPACA4	Q8TDM5	124 aa		11.01	□□□□□ -0.65
PSMD2-215	ENST00000487475	RNF185	Q96GF1	192 aa		11.01	□□□□□ -0.65
PSMD2-215	ENST00000487475	TMEM101	Q96IK0	257 aa		11.01	□□□□□ -0.65
PSMD2-215	ENST00000487475	BTF3L4	Q96K17	158 aa		11.01	□□□□□ -0.65
PSMD2-215	ENST00000487475	TMEM242	Q9NWH2	141 aa		11.01	□□□□□ -0.65
PSMD2-215	ENST00000487475	RAB4A	P20338	218 aa		11	□□□□□ -0.65
PSMD2-215	ENST00000487475	RPS10	P46783	165 aa	Known RBP	11	□□□□□ -0.65
PSMD2-215	ENST00000487475	OR5A1	Q8NGJ0	315 aa		11	□□□□□ -0.65
PSMD2-215	ENST00000487475	GVQW2	A0A096LPI5	108 aa	Predicted RBP	10.99	□□□□□ -0.65
PSMD2-215	ENST00000487475	XCL1	P47992	114 aa		10.99	□□□□□ -0.65
PSMD2-215	ENST00000487475	POLR2K	P53803	58 aa	Known RBP	10.99	□□□□□ -0.65
PSMD2-215	ENST00000487475	COX6A2	Q02221	97 aa		10.99	□□□□□ -0.65
PSMD2-215	ENST00000487475	FOXI1	Q12951	378 aa		10.99	□□□□□ -0.65
PSMD2-215	ENST00000487475	AMN1	Q8IY45	258 aa		10.99	□□□□□ -0.65
PSMD2-215	ENST00000487475	MRAP2	Q96G30	205 aa		10.99	□□□□□ -0.65
PSMD2-215	ENST00000487475		V9GYV3	84 aa		10.98	□□□□□ -0.65
PSMD2-215	ENST00000487475	TRBV27	A0A0K0K1C4	114 aa		10.97	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms