RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 YPEL4Q96NS1 127 aa2.51□□□□□ -2.01
PTCD3-216ENST00000487043 IMMP2LQ96T52 175 aa2.51□□□□□ -2.01
PTCD3-216ENST00000487043 HIST1H2BNQ99877 126 aa2.51□□□□□ -2.01
PTCD3-216ENST00000487043 HIST1H2BMQ99879 126 aa2.51□□□□□ -2.01
PTCD3-216ENST00000487043 SMIM7Q9BQ49 75 aa2.51□□□□□ -2.01
PTCD3-216ENST00000487043 SLC50A1Q9BRV3 221 aa2.51□□□□□ -2.01
PTCD3-216ENST00000487043 PRO1933Q9H354 126 aa2.51□□□□□ -2.01
PTCD3-216ENST00000487043 KLK12Q9UKR0 248 aa2.51□□□□□ -2.01
PTCD3-216ENST00000487043 JMJD1CQ15652 2540 aa2.51□□□□□ -2.01
PTCD3-216ENST00000487043 CUBNO60494 3623 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 TRBV20OR9-2A0A075B6H5 130 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 TRAV2A0A0B4J234 112 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 TRAV8-2A0A0B4J237 113 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 TRBV6-1A0A0K0K1D8 114 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 C9JCJ5 164 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 M0R3E3 92 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 ISLRO14498 428 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 OVOL1O14753 267 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 NDUFS5O43920 106 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 TRGC2P03986 189 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 SLC25A5P05141 298 aaKnown RBP2.5□□□□□ -2.01
PTCD3-216ENST00000487043 GZMBP10144 247 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 AKR1C3P42330 323 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 CSN1S1P47710 185 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 PSMB2P49721 201 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 UBE2G1P62253 170 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 GNG5P63218 68 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 DEFB114Q30KQ6 69 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 COL5A1-AS1Q5SY13 56 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 SAMD13Q5VXD3 122 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 ZNF664Q8N3J9 261 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 CIRBP-AS1Q8TBR5 109 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 DCANP1Q8TF63 244 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 FMC1Q96HJ9 113 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 HIST1H2BLQ99880 126 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 DERL1Q9BUN8 251 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 MS4A6AQ9H2W1 248 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 NAT8Q9UHE5 227 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 LY96Q9Y6Y9 160 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 TENM1Q9UKZ4 2725 aa2.5□□□□□ -2.01
PTCD3-216ENST00000487043 ATRQ13535 2644 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 IGKV3-7A0A075B6H7 116 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 C20orf202A1L168 122 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 RBAKDNA6NC62 111 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 ZNF705FA8MVS1 300 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-216ENST00000487043 LTAP01374 205 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 IGLV1-51P01701 117 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 IGLV2-8P01709 118 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 G0S2P27469 103 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 HLA-DMBP28068 263 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 GNG4P50150 75 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 RPS20P60866 119 aaKnown RBP2.49□□□□□ -2.01
PTCD3-216ENST00000487043 SNRPD3P62318 126 aaKnown RBP2.49□□□□□ -2.01
PTCD3-216ENST00000487043 LINC00483Q53H64 154 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 ZNF705AQ6ZN79 300 aaPredicted RBP2.49□□□□□ -2.01
PTCD3-216ENST00000487043 GOLT1AQ6ZVE7 132 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 FAM19A1Q7Z5A9 133 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 BAGE2Q86Y30 109 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 RNF182Q8N6D2 247 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 TMEM75Q8N9X5 138 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 WFDC9Q8NEX5 89 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 OR2K2Q8NGT1 345 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 DYNLRB2Q8TF09 96 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 FRZBQ92765 325 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 SMIM12Q96EX1 92 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 IGF2BP2-AS1Q96M15 143 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 LINC00477Q96M19 166 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 MIEN1Q9BRT3 115 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 TMEM208Q9BTX3 173 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 AGPAT4-IT1Q9H0P7 198 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 ZFP30Q9Y2G7 519 aa2.49□□□□□ -2.01
PTCD3-216ENST00000487043 IGKV2-40A0A087WW87 121 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-216ENST00000487043 TRAV8-1A0A0A6YYK1 113 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 TGIF2-C20orf24A0A0A6YYL0 155 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 OR4C46A6NHA9 309 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 K7EP13 123 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 IGKV2D-40P01614 121 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-216ENST00000487043 CXCL1P09341 107 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 ZNF705DP0CH99 300 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-216ENST00000487043 ZNF705BP0CI00 300 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-216ENST00000487043 INSL3P51460 131 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 CMC4P56277 68 aaPredicted RBP2.48□□□□□ -2.01
PTCD3-216ENST00000487043 PMVKQ15126 192 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 ADIRFQ15847 76 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 COX19Q49B96 90 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 CENPWQ5EE01 88 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 TMEM78Q5T7P6 136 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 Q5W150 140 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 FAM231DQ6ZW35 169 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 PRNTQ86SH4 94 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 Q86TA4 180 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 C3orf56Q8N813 242 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 ZNF738Q8NE65 137 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 OR8A1Q8NGG7 326 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 ORAOV1Q8WV07 137 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 LINC00167Q96N53 147 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 SNHG12Q9BXW3 62 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 OSTCQ9NRP0 149 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 ZNF492Q9P255 531 aa2.48□□□□□ -2.01
PTCD3-216ENST00000487043 NAGKQ9UJ70 344 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms