RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 OCC1Q8TAD7 63 aa15.81■□□□□ 0.12
LIME1-206ENST00000487026 A0A1B0GUV1 79 aa15.8■□□□□ 0.12
LIME1-206ENST00000487026 WDR73Q6P4I2 378 aa15.8■□□□□ 0.12
LIME1-206ENST00000487026 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.8■□□□□ 0.12
LIME1-206ENST00000487026 FAT3Q8TDW7 4589 aa15.8■□□□□ 0.12
LIME1-206ENST00000487026 TRAV26-2A0A0B4J265 109 aa15.79■□□□□ 0.12
LIME1-206ENST00000487026 PANO1I0J062 215 aa15.79■□□□□ 0.12
LIME1-206ENST00000487026 PGLYRP4Q96LB8 373 aa15.79■□□□□ 0.12
LIME1-206ENST00000487026 RPP21Q9H633 154 aaKnown RBP15.79■□□□□ 0.12
LIME1-206ENST00000487026 TRAV8-4A0A0B4J246 113 aa15.78■□□□□ 0.12
LIME1-206ENST00000487026 UBE2L6O14933 153 aa15.78■□□□□ 0.12
LIME1-206ENST00000487026 GATD1Q8NB37 220 aa15.78■□□□□ 0.12
LIME1-206ENST00000487026 hDV102S1A0JD36 115 aa15.77■□□□□ 0.12
LIME1-206ENST00000487026 AMTP48728 403 aa15.77■□□□□ 0.12
LIME1-206ENST00000487026 COTL1Q14019 142 aa15.77■□□□□ 0.12
LIME1-206ENST00000487026 SDIM1Q6ZPB5 146 aa15.77■□□□□ 0.12
LIME1-206ENST00000487026 CLRN3Q8NCR9 226 aa15.77■□□□□ 0.12
LIME1-206ENST00000487026 PKHD1L1Q86WI1 4243 aa15.77■□□□□ 0.11
LIME1-206ENST00000487026 TAGLN2P37802 199 aaKnown RBP15.76■□□□□ 0.11
LIME1-206ENST00000487026 FOXA3P55318 350 aaPredicted RBP15.76■□□□□ 0.11
LIME1-206ENST00000487026 RPL37AP61513 92 aaKnown RBP15.76■□□□□ 0.11
LIME1-206ENST00000487026 CNFNQ9BYD5 112 aa15.76■□□□□ 0.11
LIME1-206ENST00000487026 GTSF1Q8WW33 167 aa15.75■□□□□ 0.11
LIME1-206ENST00000487026 RPL39LQ96EH5 51 aaKnown RBP15.74■□□□□ 0.11
LIME1-206ENST00000487026 SLPIP03973 132 aa15.73■□□□□ 0.11
LIME1-206ENST00000487026 IGKV3OR2-268A0A0C4DH90 116 aa15.72■□□□□ 0.11
LIME1-206ENST00000487026 CNBPP62633 177 aaKnown RBP15.72■□□□□ 0.11
LIME1-206ENST00000487026 ALKAL2Q6UX46 152 aa15.72■□□□□ 0.11
LIME1-206ENST00000487026 HNRNPA3P51991 378 aaKnown RBP15.71■□□□□ 0.11
LIME1-206ENST00000487026 BLOC1S1P78537 153 aa15.71■□□□□ 0.11
LIME1-206ENST00000487026 GATCO43716 136 aaKnown RBP15.7■□□□□ 0.1
LIME1-206ENST00000487026 GAGE12HA6NDE8 117 aa15.69■□□□□ 0.1
LIME1-206ENST00000487026 OXTP01178 125 aa15.69■□□□□ 0.1
LIME1-206ENST00000487026 CEBPGP53567 150 aa15.69■□□□□ 0.1
LIME1-206ENST00000487026 SMIM15Q7Z3B0 74 aa15.69■□□□□ 0.1
LIME1-206ENST00000487026 AP5S1Q9NUS5 200 aa15.69■□□□□ 0.1
LIME1-206ENST00000487026 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.68■□□□□ 0.1
LIME1-206ENST00000487026 IGKV2-29A2NJV5 120 aaPredicted RBP15.68■□□□□ 0.1
LIME1-206ENST00000487026 IGHV3-64A0A075B6Q5 118 aa15.67■□□□□ 0.1
LIME1-206ENST00000487026 TMEM250H0YL14 139 aa15.67■□□□□ 0.1
LIME1-206ENST00000487026 TEX261Q6UWH6 196 aa15.67■□□□□ 0.1
LIME1-206ENST00000487026 DPH3Q96FX2 82 aa15.67■□□□□ 0.1
LIME1-206ENST00000487026 CHTF8P0CG12 524 aa15.66■□□□□ 0.1
LIME1-206ENST00000487026 AMMECR1LQ6DCA0 310 aa15.66■□□□□ 0.1
LIME1-206ENST00000487026 RNASEKQ6P5S7 137 aaKnown RBP15.66■□□□□ 0.1
LIME1-206ENST00000487026 C15orf56Q8N910 161 aa15.66■□□□□ 0.1
LIME1-206ENST00000487026 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.65■□□□□ 0.1
LIME1-206ENST00000487026 SDHAF1A6NFY7 115 aa15.65■□□□□ 0.1
LIME1-206ENST00000487026 FAM231DQ6ZW35 169 aa15.65■□□□□ 0.1
LIME1-206ENST00000487026 A8MWL6 223 aa15.64■□□□□ 0.09
LIME1-206ENST00000487026 CIRBPQ14011 172 aaKnown RBP15.64■□□□□ 0.09
LIME1-206ENST00000487026 GAS8-AS1O95177 125 aa15.63■□□□□ 0.09
LIME1-206ENST00000487026 NCR2O95944 276 aa15.63■□□□□ 0.09
LIME1-206ENST00000487026 APCSP02743 223 aa15.63■□□□□ 0.09
LIME1-206ENST00000487026 FGF6P10767 208 aa15.63■□□□□ 0.09
LIME1-206ENST00000487026 LYPD6BQ8NI32 183 aa15.63■□□□□ 0.09
LIME1-206ENST00000487026 HIGD2BQ4VC39 106 aa15.62■□□□□ 0.09
LIME1-206ENST00000487026 CHCHD10Q8WYQ3 142 aaPredicted RBP15.62■□□□□ 0.09
LIME1-206ENST00000487026 A0A087WYN8 130 aa15.61■□□□□ 0.09
LIME1-206ENST00000487026 PMCHP20382 165 aa15.61■□□□□ 0.09
LIME1-206ENST00000487026 CFAP161Q6P656 301 aa15.61■□□□□ 0.09
LIME1-206ENST00000487026 HMCN2Q8NDA2 5059 aa15.6■□□□□ 0.09
LIME1-206ENST00000487026 FAM231BA6NCW3 169 aa15.6■□□□□ 0.09
LIME1-206ENST00000487026 SERTAD4-AS1Q5TG53 156 aa15.6■□□□□ 0.09
LIME1-206ENST00000487026 H7C423 109 aa15.59■□□□□ 0.09
LIME1-206ENST00000487026 I3L3M4 83 aa15.59■□□□□ 0.09
LIME1-206ENST00000487026 SPACA4Q8TDM5 124 aa15.59■□□□□ 0.09
LIME1-206ENST00000487026 EIF5A2Q9GZV4 153 aaKnown RBP15.59■□□□□ 0.09
LIME1-206ENST00000487026 RAB14P61106 215 aa15.58■□□□□ 0.08
LIME1-206ENST00000487026 CT83Q5H943 113 aa15.58■□□□□ 0.08
LIME1-206ENST00000487026 SMIM7Q9BQ49 75 aa15.58■□□□□ 0.08
LIME1-206ENST00000487026 TRBV6-5A0A0K0K1A5 114 aa15.57■□□□□ 0.08
LIME1-206ENST00000487026 RPS10P46783 165 aaKnown RBP15.57■□□□□ 0.08
LIME1-206ENST00000487026 COX6A2Q02221 97 aa15.57■□□□□ 0.08
LIME1-206ENST00000487026 BORCS7Q96B45 105 aa15.57■□□□□ 0.08
LIME1-206ENST00000487026 HIGD1CA8MV81 97 aa15.56■□□□□ 0.08
LIME1-206ENST00000487026 TSHBP01222 138 aa15.56■□□□□ 0.08
LIME1-206ENST00000487026 LINC01551Q86U37 167 aa15.56■□□□□ 0.08
LIME1-206ENST00000487026 RNF185Q96GF1 192 aa15.56■□□□□ 0.08
LIME1-206ENST00000487026 ST20Q9HBF5 79 aa15.56■□□□□ 0.08
LIME1-206ENST00000487026 TMEM242Q9NWH2 141 aa15.56■□□□□ 0.08
LIME1-206ENST00000487026 A0A1B0GUT8 65 aa15.55■□□□□ 0.08
LIME1-206ENST00000487026 FOXI1Q12951 378 aa15.55■□□□□ 0.08
LIME1-206ENST00000487026 PRSS3P2Q8NHM4 247 aa15.55■□□□□ 0.08
LIME1-206ENST00000487026 TSKUQ8WUA8 353 aa15.55■□□□□ 0.08
LIME1-206ENST00000487026 XCL1P47992 114 aa15.54■□□□□ 0.08
LIME1-206ENST00000487026 OR5A1Q8NGJ0 315 aa15.54■□□□□ 0.08
LIME1-206ENST00000487026 TMEM101Q96IK0 257 aa15.54■□□□□ 0.08
LIME1-206ENST00000487026 BTF3L4Q96K17 158 aa15.54■□□□□ 0.08
LIME1-206ENST00000487026 TMEM191AQ9H0A3 160 aa15.54■□□□□ 0.08
LIME1-206ENST00000487026 ZNF727A8MUV8 499 aa15.53■□□□□ 0.08
LIME1-206ENST00000487026 ESDP10768 282 aa15.53■□□□□ 0.08
LIME1-206ENST00000487026 ZNF25P17030 456 aaPredicted RBP15.53■□□□□ 0.08
LIME1-206ENST00000487026 RAB4AP20338 218 aa15.53■□□□□ 0.08
LIME1-206ENST00000487026 PLAC8Q9NZF1 115 aa15.53■□□□□ 0.08
LIME1-206ENST00000487026 IGKV2-24A0A0C4DH68 120 aa15.52■□□□□ 0.08
LIME1-206ENST00000487026 SRP19P09132 144 aaKnown RBP15.52■□□□□ 0.08
LIME1-206ENST00000487026 FAM210AQ96ND0 272 aa15.52■□□□□ 0.08
LIME1-206ENST00000487026 OSTCQ9NRP0 149 aa15.52■□□□□ 0.08
LIME1-206ENST00000487026 GVQW2A0A096LPI5 108 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms