RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 IFITM3Q01628 133 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 DNLZQ5SXM8 178 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 KCNIP4Q6PIL6 250 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 PRNTQ86SH4 94 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 C14orf178Q8N769 122 aaPredicted RBP2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 OR2G3Q8NGZ4 309 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 ENKURQ8TC29 256 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 UBE2WQ96B02 151 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 DNAJC30Q96LL9 226 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 SMIM3Q9BZL3 60 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 JPT2Q9H910 190 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 WFDC1Q9HC57 220 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 TMEM167BQ9NRX6 74 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 IL36BQ9NZH7 164 aa2.52□□□□□ -2.01
SNRNP40-205ENST00000486941 TRBV7-3A0A075B6L6 115 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 TRBV10-1A0A0K0K1A3 114 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 A0A1W2PRE2 83 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 B4DEV8 164 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 CXorf1O96002 111 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 MBP02144 154 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 ARMS2P0C7Q2 107 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 GCHFRP30047 84 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 HNRNPA3P51991 378 aaKnown RBP2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 UBE2D3P61077 147 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 UBE2D2P62837 147 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 SERF2P84101 59 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 RGS21Q2M5E4 152 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 ENHOQ6UWT2 76 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 Q6ZRU5 148 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 LINC00518Q8N0U6 118 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 C9orf163Q8N9P6 203 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 S100ZQ8WXG8 99 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 SFRP2Q96HF1 295 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 MARVELD1Q9BSK0 173 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 PSMG3Q9BT73 122 aaPredicted RBP2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 TNFSF18Q9UNG2 199 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 ARL2-SNX15V9GYD0 113 aa2.51□□□□□ -2.01
SNRNP40-205ENST00000486941 TRBV6-8A0A0A6YYG3 113 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 TRAV34A0A0B4J273 112 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 A0A0D9SG52 128 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 KRBOX1C9JBD0 128 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 TMEM262E9PQX1 116 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 H3BVH4 76 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 SSNA1O43805 119 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 UPK1BO75841 260 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 SNAPINO95295 136 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 CRPP02741 224 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 S100A6P06703 90 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 MT1HL1P0DM35 61 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 TPT1P13693 172 aaKnown RBP2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 ATP6V0CP27449 155 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 RAB4BP61018 213 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 PKIAP61925 76 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 S100A12P80511 92 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 MIAQ16674 131 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 Q5BKY6 102 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 FAM74A4Q5TZK3 123 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 SDIM1Q6ZPB5 146 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 COX8CQ7Z4L0 72 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 C15orf54Q8N8G6 183 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 HSD17B11Q8NBQ5 300 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 HIST1H2BAQ96A08 127 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 NKX6-2Q9C056 277 aaPredicted RBP2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 ACTR3CQ9C0K3 210 aaPredicted RBP2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 ZFP30Q9Y2G7 519 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 PHLDA3Q9Y5J5 127 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 PKHD1L1Q86WI1 4243 aa2.5□□□□□ -2.01
SNRNP40-205ENST00000486941 GRIFINA4D1Z8 144 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 M0R036 132 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 M0R381 172 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 PEX7O00628 323 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 IFNA7P01567 189 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 ANGP03950 147 aaKnown RBP2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 CRIP1P50238 77 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 RPL19P84098 196 aaKnown RBP2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 CIRBPQ14011 172 aaKnown RBP2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 MPV17L2Q567V2 206 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 TMEM97Q5BJF2 176 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 FAM162BQ5T6X4 162 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 PRR27Q6MZM9 219 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 Q86TA4 180 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 ZFP82Q8N141 532 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 ZC2HC1AQ96GY0 325 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 LINC00167Q96N53 147 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 AQP10Q96PS8 301 aa2.49□□□□□ -2.01
SNRNP40-205ENST00000486941 TRBV6-1A0A0K0K1D8 114 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 CTXND1A0A1B0GTU2 59 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 LINC00862A6NCI5 91 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 FAM74A7A6NL05 159 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 PANO1I0J062 215 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 SH2D1AO60880 128 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 PTTG1O95997 202 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 HLA-DQA1P01909 254 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 FHITP49789 147 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 DEFA1P59665 94 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 DEFA3P59666 94 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 UBE2G2P60604 165 aa2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 CNBPP62633 177 aaKnown RBP2.48□□□□□ -2.01
SNRNP40-205ENST00000486941 KRTAP26-1Q6PEX3 210 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms