RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 GAGE2BQ13066 116 aa9.17□□□□□ -0.94
HSPG2-211ENST00000486901 GAGE2EQ4V326 116 aa9.17□□□□□ -0.94
HSPG2-211ENST00000486901 GAGE2DQ9UEU5 116 aa9.17□□□□□ -0.94
HSPG2-211ENST00000486901 M0QY20 66 aa9.16□□□□□ -0.94
HSPG2-211ENST00000486901 DEFB136Q30KP8 78 aa9.16□□□□□ -0.94
HSPG2-211ENST00000486901 LYRM7Q5U5X0 104 aa9.16□□□□□ -0.94
HSPG2-211ENST00000486901 RHODO00212 210 aa9.16□□□□□ -0.94
HSPG2-211ENST00000486901 IGHV3-30-3P0DP02 117 aa9.16□□□□□ -0.94
HSPG2-211ENST00000486901 TMEM263Q8WUH6 116 aaKnown RBP9.16□□□□□ -0.94
HSPG2-211ENST00000486901 IGHV1-69DA0A0B4J2H0 117 aa9.15□□□□□ -0.95
HSPG2-211ENST00000486901 A0A0J9YXY3 114 aa9.15□□□□□ -0.95
HSPG2-211ENST00000486901 FAM223BA6NKX1 122 aa9.15□□□□□ -0.95
HSPG2-211ENST00000486901 IGHV1-69P01742 117 aa9.15□□□□□ -0.95
HSPG2-211ENST00000486901 LINC01620Q4KN68 170 aa9.15□□□□□ -0.95
HSPG2-211ENST00000486901 C2orf82Q6UX34 121 aa9.15□□□□□ -0.95
HSPG2-211ENST00000486901 FAM223AQ8IWN6 122 aa9.15□□□□□ -0.95
HSPG2-211ENST00000486901 C15orf53Q8NAA6 179 aa9.15□□□□□ -0.95
HSPG2-211ENST00000486901 TMEM223A0PJW6 202 aa9.14□□□□□ -0.95
HSPG2-211ENST00000486901 IGLV4-3A0A075B6K6 122 aa9.14□□□□□ -0.95
HSPG2-211ENST00000486901 AVPP01185 164 aa9.14□□□□□ -0.95
HSPG2-211ENST00000486901 TIMM21Q9BVV7 248 aa9.14□□□□□ -0.95
HSPG2-211ENST00000486901 ATP6V0E2Q8NHE4 81 aa9.14□□□□□ -0.95
HSPG2-211ENST00000486901 LENEPQ9Y5L5 61 aa9.14□□□□□ -0.95
HSPG2-211ENST00000486901 NDUFA7O95182 113 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 ATRQ13535 2644 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 PAPPA-AS1Q5QFB9 102 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 DCANP1Q8TF63 244 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 TMEM141Q96I45 108 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 LINC01619G3V211 115 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 RS1O15537 224 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 PPP1R17O96001 155 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 NHLRC4P0CG21 123 aaPredicted RBP9.13□□□□□ -0.95
HSPG2-211ENST00000486901 C20orf203Q8NBC4 194 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 TIMM17AQ99595 171 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 NDUFA12Q9UI09 145 aa9.13□□□□□ -0.95
HSPG2-211ENST00000486901 TRAV8-4A0A0B4J246 113 aa9.12□□□□□ -0.95
HSPG2-211ENST00000486901 TRBV27A0A0K0K1C4 114 aa9.12□□□□□ -0.95
HSPG2-211ENST00000486901 KLLNB2CW77 178 aa9.12□□□□□ -0.95
HSPG2-211ENST00000486901 Q6ZSN1 163 aa9.12□□□□□ -0.95
HSPG2-211ENST00000486901 IGHV4OR15-8A0A075B7B6 117 aa9.12□□□□□ -0.95
HSPG2-211ENST00000486901 A0A087WW49 117 aa9.12□□□□□ -0.95
HSPG2-211ENST00000486901 IGHV4-59P01825 116 aa9.12□□□□□ -0.95
HSPG2-211ENST00000486901 ID1P41134 155 aa9.12□□□□□ -0.95
HSPG2-211ENST00000486901 LEPROTO15243 131 aa9.12□□□□□ -0.95
HSPG2-211ENST00000486901 FBXL19-AS1Q494R0 122 aa9.12□□□□□ -0.95
HSPG2-211ENST00000486901 RBMY1A1P0DJD3 496 aaKnown RBP9.11□□□□□ -0.95
HSPG2-211ENST00000486901 RBMY1CP0DJD4 496 aa9.11□□□□□ -0.95
HSPG2-211ENST00000486901 RBMY1FQ15415 496 aaKnown RBP9.11□□□□□ -0.95
HSPG2-211ENST00000486901 IGHV1OR15-1A0A075B7D0 117 aa9.11□□□□□ -0.95
HSPG2-211ENST00000486901 IGKV3OR2-268A0A0C4DH90 116 aa9.11□□□□□ -0.95
HSPG2-211ENST00000486901 FAM19A4Q96LR4 140 aa9.11□□□□□ -0.95
HSPG2-211ENST00000486901 ATXN8Q156A1 80 aa9.11□□□□□ -0.95
HSPG2-211ENST00000486901 C18orf65Q6ZTR6 163 aa9.11□□□□□ -0.95
HSPG2-211ENST00000486901 IGHV4-30-2A0A087WSY4 118 aa9.1□□□□□ -0.95
HSPG2-211ENST00000486901 I3L3M4 83 aa9.1□□□□□ -0.95
HSPG2-211ENST00000486901 IGHV3-53P01767 116 aa9.1□□□□□ -0.95
HSPG2-211ENST00000486901 GCN1Q92616 2671 aaKnown RBP9.1□□□□□ -0.95
HSPG2-211ENST00000486901 SMIM20Q8N5G0 67 aa9.1□□□□□ -0.95
HSPG2-211ENST00000486901 CHCHD5Q9BSY4 110 aa9.1□□□□□ -0.95
HSPG2-211ENST00000486901 NDUFV3P56181 108 aaKnown RBP9.09□□□□□ -0.95
HSPG2-211ENST00000486901 POM121L12Q8N7R1 296 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 TNFRSF18Q9Y5U5 241 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 AKAP9Q99996 3911 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 H3BMM0 161 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 RPL13AP40429 203 aaKnown RBP9.09□□□□□ -0.95
HSPG2-211ENST00000486901 GAGE5Q13069 117 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 GAGE6Q13070 117 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 UBE2WQ96B02 151 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 PIMREGQ9BSJ6 248 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 LGALS9O00182 355 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 DEFB131AP59861 70 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 SNRPD3P62318 126 aaKnown RBP9.09□□□□□ -0.95
HSPG2-211ENST00000486901 CFHR3Q02985 330 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
HSPG2-211ENST00000486901 M0R2P5 195 aa9.08□□□□□ -0.96
HSPG2-211ENST00000486901 APRG1Q8IVJ8 170 aa9.08□□□□□ -0.96
HSPG2-211ENST00000486901 ODF3Q96PU9 254 aa9.08□□□□□ -0.96
HSPG2-211ENST00000486901 H7C423 109 aa9.08□□□□□ -0.96
HSPG2-211ENST00000486901 IGHG2P01859 326 aa9.08□□□□□ -0.96
HSPG2-211ENST00000486901 A0A0J9YX75 114 aa9.08□□□□□ -0.96
HSPG2-211ENST00000486901 C19orf54Q5BKX5 351 aa9.08□□□□□ -0.96
HSPG2-211ENST00000486901 TRAV13-1A0A0B4J241 112 aa9.07□□□□□ -0.96
HSPG2-211ENST00000486901 TMEM262E9PQX1 116 aa9.07□□□□□ -0.96
HSPG2-211ENST00000486901 CDKN2A-AS1Q9UH64 79 aa9.07□□□□□ -0.96
HSPG2-211ENST00000486901 HOXD3P31249 432 aaPredicted RBP9.07□□□□□ -0.96
HSPG2-211ENST00000486901 DGAT2L7PQ6IED9 249 aa9.07□□□□□ -0.96
HSPG2-211ENST00000486901 USMG5Q96IX5 58 aa9.07□□□□□ -0.96
HSPG2-211ENST00000486901 LINC00467Q9BRT7 94 aa9.07□□□□□ -0.96
HSPG2-211ENST00000486901 IFITM1P13164 125 aa9.06□□□□□ -0.96
HSPG2-211ENST00000486901 CITED1Q99966 193 aa9.06□□□□□ -0.96
HSPG2-211ENST00000486901 UBR5O95071 2799 aaPredicted RBP9.06□□□□□ -0.96
HSPG2-211ENST00000486901 SBSPONQ8IVN8 264 aa9.06□□□□□ -0.96
HSPG2-211ENST00000486901 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.06□□□□□ -0.96
HSPG2-211ENST00000486901 UBE2E2Q96LR5 201 aa9.06□□□□□ -0.96
HSPG2-211ENST00000486901 C9orf85Q96MD7 179 aa9.06□□□□□ -0.96
HSPG2-211ENST00000486901 ITPR2Q14571 2701 aa9.06□□□□□ -0.96
HSPG2-211ENST00000486901 NXPH4O95158 308 aa9.06□□□□□ -0.96
HSPG2-211ENST00000486901 SLURP1P55000 103 aa9.05□□□□□ -0.96
HSPG2-211ENST00000486901 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
HSPG2-211ENST00000486901 MED14OSP0DP75 135 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms