RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 COL4A4P53420 1690 aaPredicted RBP2.88□□□□□ -1.95
LMBR1-218ENST00000486837 NCOA6Q14686 2063 aaPredicted RBP2.88□□□□□ -1.95
LMBR1-218ENST00000486837 PTPRDP23468 1912 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 IGKV1D-43A0A0B4J1Z2 117 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 IGLV3-27P01718 113 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 HMGN2P05204 90 aaKnown RBP2.87□□□□□ -1.95
LMBR1-218ENST00000486837 CD28P10747 220 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 IAPPP10997 89 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 PLNP26678 52 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 FXYD4P59646 89 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 UBE2BP63146 152 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 TFF3Q07654 80 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 CIRBPQ14011 172 aaKnown RBP2.87□□□□□ -1.95
LMBR1-218ENST00000486837 RHOHQ15669 191 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 ZNF818PQ6ZRF7 136 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 TMEM263Q8WUH6 116 aaKnown RBP2.87□□□□□ -1.95
LMBR1-218ENST00000486837 SPTSSAQ969W0 71 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 UBE2D4Q9Y2X8 147 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 PCDH15Q96QU1 1955 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 SVILO95425 2214 aa2.87□□□□□ -1.95
LMBR1-218ENST00000486837 TRAV7A0A075B6U4 112 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 IGLV3-32A0A0A0MS00 114 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 TRAV12-1A0A0B4J245 112 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 IGHV1-3A0A0C4DH29 117 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 E7EQL1 145 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 H3BSH0 61 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 K7ERS5 55 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 FSTL3O95633 263 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 IGHV3-30P01768 117 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 IGHV3-30-5P0DP03 117 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 ESRGQ1W209 222 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 SPANXN5Q5MJ07 72 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.86□□□□□ -1.95
LMBR1-218ENST00000486837 SFTA2Q6UW10 78 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 CCL13Q99616 98 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 TIMM21Q9BVV7 248 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
LMBR1-218ENST00000486837 IGKV1D-17A0A075B6S4 117 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.85□□□□□ -1.95
LMBR1-218ENST00000486837 A0A0J9YY99 117 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 TMEM30CPA0ZSE6 113 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 A6NN06 94 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 SNRNP200O75643 2136 aaKnown RBP2.85□□□□□ -1.95
LMBR1-218ENST00000486837 COX6B1P14854 86 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 HMGA1P17096 107 aaKnown RBP2.85□□□□□ -1.95
LMBR1-218ENST00000486837 KRTAP10-8P60410 259 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 FGF12P61328 243 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 PLGLAQ15195 96 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 Q5W150 140 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 C7orf65Q6ZTY9 151 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 VMO1Q7Z5L0 202 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 DYNAPQ8N1N2 210 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 C20orf197Q8N268 126 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 DIRC1Q969H9 104 aa2.85□□□□□ -1.95
LMBR1-218ENST00000486837 TIMM8BQ9Y5J9 83 aaPredicted RBP2.85□□□□□ -1.95
LMBR1-218ENST00000486837 DOCK11Q5JSL3 2073 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 KIAA1549LQ6ZVL6 1849 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 IGHV3-43A0A0B4J1X8 118 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 TRAV40A0A0B4J280 105 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 IGKV1-12A0A0C4DH73 117 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 TRBV10-3A0A0K0K1G6 114 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 E7EUB6 86 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 IGKV1D-12P01611 117 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 COX6CP09669 75 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 PIRTP0C851 137 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 INAFM2P0DMQ5 153 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 CD24P25063 80 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 EDDM3BP56851 147 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 BLCAPP62952 87 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 ATP5EP2Q5VTU8 51 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 ATP11AUNQ6ZP68 121 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 BPESC1Q9GZL8 116 aa2.84□□□□□ -1.95
LMBR1-218ENST00000486837 PLXNA2O75051 1894 aa2.84□□□□□ -1.96
LMBR1-218ENST00000486837 SCN3AQ9NY46 2000 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 A0A1B0GUT8 65 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 ZNF815PA8K554 130 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 BUB1B-PAK6H3BSN5 160 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 M0R135 149 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 COX7A2LO14548 114 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 IGKV1-5P01602 117 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 DEFA4P12838 97 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 CCL4P13236 92 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 ZNF137PP52743 207 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 BSPH1Q075Z2 132 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 FAM229BQ4G0N7 80 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 MRPL51Q4U2R6 128 aaKnown RBP2.83□□□□□ -1.96
LMBR1-218ENST00000486837 ZNF826PQ6ZT77 177 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 GPHB5Q86YW7 130 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 B9D2Q9BPU9 175 aa2.83□□□□□ -1.96
LMBR1-218ENST00000486837 IGHV3-21A0A0B4J1V1 117 aa2.82□□□□□ -1.96
LMBR1-218ENST00000486837 IGKV1-9A0A0C4DH69 117 aa2.82□□□□□ -1.96
LMBR1-218ENST00000486837 TRBV6-1A0A0K0K1D8 114 aa2.82□□□□□ -1.96
LMBR1-218ENST00000486837 F8VRH5 84 aa2.82□□□□□ -1.96
LMBR1-218ENST00000486837 F8WEM9 126 aa2.82□□□□□ -1.96
LMBR1-218ENST00000486837 MIFP14174 115 aa2.82□□□□□ -1.96
LMBR1-218ENST00000486837 FUSP35637 526 aaKnown RBP eCLIP2.82□□□□□ -1.96
LMBR1-218ENST00000486837 DYNLRB2Q8TF09 96 aa2.82□□□□□ -1.96
LMBR1-218ENST00000486837 ATG2BQ96BY7 2078 aa2.81□□□□□ -1.96
LMBR1-218ENST00000486837 ERC2-IT1O76042 136 aa2.81□□□□□ -1.96
LMBR1-218ENST00000486837 IGHV1-46P01743 117 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 330 ms