RNA–Protein interactions for RNA: ENST00000486793.5

GMDS-205, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 3

Gene GMDS, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-205ENST00000486793 GAGE12HA6NDE8 117 aa11.84□□□□□ -0.51
GMDS-205ENST00000486793 PHOX2AO14813 284 aa11.84□□□□□ -0.51
GMDS-205ENST00000486793 NTF3P20783 257 aa11.84□□□□□ -0.51
GMDS-205ENST00000486793 COX6A2Q02221 97 aa11.84□□□□□ -0.51
GMDS-205ENST00000486793 WDR73Q6P4I2 378 aa11.84□□□□□ -0.51
GMDS-205ENST00000486793 LYZL1Q6UWQ5 148 aa11.84□□□□□ -0.51
GMDS-205ENST00000486793 C15orf56Q8N910 161 aa11.84□□□□□ -0.51
GMDS-205ENST00000486793 KANTRA0A1W2PQU2 76 aa11.83□□□□□ -0.52
GMDS-205ENST00000486793 HMSDA8MTL9 139 aa11.83□□□□□ -0.52
GMDS-205ENST00000486793 BCL2L11O43521 198 aa11.83□□□□□ -0.52
GMDS-205ENST00000486793 TRGC1P0CF51 173 aa11.83□□□□□ -0.52
GMDS-205ENST00000486793 AMTP48728 403 aa11.83□□□□□ -0.52
GMDS-205ENST00000486793 COTL1Q14019 142 aa11.83□□□□□ -0.52
GMDS-205ENST00000486793 RGS21Q2M5E4 152 aa11.83□□□□□ -0.52
GMDS-205ENST00000486793 CFAP161Q6P656 301 aa11.83□□□□□ -0.52
GMDS-205ENST00000486793 C7orf33Q8WU49 177 aa11.83□□□□□ -0.52
GMDS-205ENST00000486793 MANBALQ9NQG1 85 aa11.83□□□□□ -0.52
GMDS-205ENST00000486793 IGKV3OR2-268A0A0C4DH90 116 aa11.82□□□□□ -0.52
GMDS-205ENST00000486793 XKRY2A2RUG3 117 aa11.82□□□□□ -0.52
GMDS-205ENST00000486793 IFNA1P01562 189 aa11.82□□□□□ -0.52
GMDS-205ENST00000486793 RPS10P46783 165 aaKnown RBP11.82□□□□□ -0.52
GMDS-205ENST00000486793 GNG4P50150 75 aa11.82□□□□□ -0.52
GMDS-205ENST00000486793 DPH3P1Q9H4G8 78 aa11.82□□□□□ -0.52
GMDS-205ENST00000486793 HIGD2BQ4VC39 106 aa11.81□□□□□ -0.52
GMDS-205ENST00000486793 C9orf62Q8N4C0 152 aa11.81□□□□□ -0.52
GMDS-205ENST00000486793 PRSS3P2Q8NHM4 247 aa11.81□□□□□ -0.52
GMDS-205ENST00000486793 GTSF1Q8WW33 167 aa11.81□□□□□ -0.52
GMDS-205ENST00000486793 TRAV1-1A0A0B4J248 108 aa11.8□□□□□ -0.52
GMDS-205ENST00000486793 EIF5AP63241 154 aaKnown RBP11.8□□□□□ -0.52
GMDS-205ENST00000486793 MAJINQ3KP22 176 aa11.8□□□□□ -0.52
GMDS-205ENST00000486793 IGKV2-24A0A0C4DH68 120 aa11.79□□□□□ -0.52
GMDS-205ENST00000486793 NDUFS6O75380 124 aaKnown RBP11.79□□□□□ -0.52
GMDS-205ENST00000486793 SMIM12Q96EX1 92 aa11.79□□□□□ -0.52
GMDS-205ENST00000486793 TRBV20OR9-2A0A075B6H5 130 aa11.78□□□□□ -0.52
GMDS-205ENST00000486793 TWIST1Q15672 202 aa11.78□□□□□ -0.52
GMDS-205ENST00000486793 GATD1Q8NB37 220 aa11.78□□□□□ -0.52
GMDS-205ENST00000486793 CHCHD10Q8WYQ3 142 aaPredicted RBP11.78□□□□□ -0.52
GMDS-205ENST00000486793 LINC01600Q96MT4 127 aa11.78□□□□□ -0.52
GMDS-205ENST00000486793 TRAV26-2A0A0B4J265 109 aa11.77□□□□□ -0.53
GMDS-205ENST00000486793 STPG4Q8N801 248 aa11.77□□□□□ -0.53
GMDS-205ENST00000486793 NUDT10Q8NFP7 164 aa11.77□□□□□ -0.53
GMDS-205ENST00000486793 LYPD6BQ8NI32 183 aa11.77□□□□□ -0.53
GMDS-205ENST00000486793 NUDT11Q96G61 164 aa11.77□□□□□ -0.53
GMDS-205ENST00000486793 MED9Q9NWA0 146 aa11.77□□□□□ -0.53
GMDS-205ENST00000486793 MEF2BQ02080 365 aaPredicted RBP11.76□□□□□ -0.53
GMDS-205ENST00000486793 ODF1Q14990 250 aa11.76□□□□□ -0.53
GMDS-205ENST00000486793 AMMECR1LQ6DCA0 310 aa11.76□□□□□ -0.53
GMDS-205ENST00000486793 BIN3Q9NQY0 253 aa11.76□□□□□ -0.53
GMDS-205ENST00000486793 PDE6DO43924 150 aa11.75□□□□□ -0.53
GMDS-205ENST00000486793 CTRLP40313 264 aa11.75□□□□□ -0.53
GMDS-205ENST00000486793 PRR3P79522 188 aaKnown RBP11.75□□□□□ -0.53
GMDS-205ENST00000486793 Q6ZNX1 250 aa11.75□□□□□ -0.53
GMDS-205ENST00000486793 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.74□□□□□ -0.53
GMDS-205ENST00000486793 GVQW2A0A096LPI5 108 aaPredicted RBP11.74□□□□□ -0.53
GMDS-205ENST00000486793 IGKV2-29A2NJV5 120 aaPredicted RBP11.74□□□□□ -0.53
GMDS-205ENST00000486793 TEX46H3BTG2 121 aa11.74□□□□□ -0.53
GMDS-205ENST00000486793 RNASEKQ6P5S7 137 aaKnown RBP11.74□□□□□ -0.53
GMDS-205ENST00000486793 RPL39LQ96EH5 51 aaKnown RBP11.74□□□□□ -0.53
GMDS-205ENST00000486793 CNFNQ9BYD5 112 aa11.74□□□□□ -0.53
GMDS-205ENST00000486793 A0A096LNI7 61 aa11.72□□□□□ -0.53
GMDS-205ENST00000486793 NCR2O95944 276 aa11.72□□□□□ -0.53
GMDS-205ENST00000486793 FGF6P10767 208 aa11.72□□□□□ -0.53
GMDS-205ENST00000486793 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
GMDS-205ENST00000486793 FOXI1Q12951 378 aa11.72□□□□□ -0.53
GMDS-205ENST00000486793 H7C423 109 aa11.71□□□□□ -0.53
GMDS-205ENST00000486793 RNASE7Q9H1E1 156 aaKnown RBP11.71□□□□□ -0.53
GMDS-205ENST00000486793 APCSP02743 223 aa11.7□□□□□ -0.54
GMDS-205ENST00000486793 EIF5AL1Q6IS14 154 aaKnown RBP11.7□□□□□ -0.54
GMDS-205ENST00000486793 LINC00526Q96FQ7 95 aa11.7□□□□□ -0.54
GMDS-205ENST00000486793 RPP21Q9H633 154 aaKnown RBP11.7□□□□□ -0.54
GMDS-205ENST00000486793 A0A0J9YXV3 536 aa11.69□□□□□ -0.54
GMDS-205ENST00000486793 SDHAF1A6NFY7 115 aa11.69□□□□□ -0.54
GMDS-205ENST00000486793 BCL2P10415 239 aa11.69□□□□□ -0.54
GMDS-205ENST00000486793 XCL1P47992 114 aa11.69□□□□□ -0.54
GMDS-205ENST00000486793 KRTAP10-8P60410 259 aa11.69□□□□□ -0.54
GMDS-205ENST00000486793 OCC1Q8TAD7 63 aa11.69□□□□□ -0.54
GMDS-205ENST00000486793 FAM231BA6NCW3 169 aa11.68□□□□□ -0.54
GMDS-205ENST00000486793 K7EN84 100 aa11.68□□□□□ -0.54
GMDS-205ENST00000486793 SPINK6Q6UWN8 80 aa11.68□□□□□ -0.54
GMDS-205ENST00000486793 SMIM15Q7Z3B0 74 aa11.68□□□□□ -0.54
GMDS-205ENST00000486793 OR5A1Q8NGJ0 315 aa11.68□□□□□ -0.54
GMDS-205ENST00000486793 LINC00474Q9P2X8 69 aa11.68□□□□□ -0.54
GMDS-205ENST00000486793 PMCHP20382 165 aa11.67□□□□□ -0.54
GMDS-205ENST00000486793 TEX261Q6UWH6 196 aa11.67□□□□□ -0.54
GMDS-205ENST00000486793 LINC00959A0A1B0GUT2 108 aa11.66□□□□□ -0.54
GMDS-205ENST00000486793 I3L3M4 83 aa11.66□□□□□ -0.54
GMDS-205ENST00000486793 CCL25O15444 150 aa11.66□□□□□ -0.54
GMDS-205ENST00000486793 ZNF25P17030 456 aaPredicted RBP11.66□□□□□ -0.54
GMDS-205ENST00000486793 SRSF9Q13242 221 aaKnown RBP eCLIP11.66□□□□□ -0.54
GMDS-205ENST00000486793 TMEM101Q96IK0 257 aa11.66□□□□□ -0.54
GMDS-205ENST00000486793 BTF3L4Q96K17 158 aa11.66□□□□□ -0.54
GMDS-205ENST00000486793 IGHV1-58A0A0C4DH39 117 aa11.65□□□□□ -0.54
GMDS-205ENST00000486793 REG3GQ6UW15 175 aa11.65□□□□□ -0.54
GMDS-205ENST00000486793 CARD19Q96LW7 228 aa11.64□□□□□ -0.55
GMDS-205ENST00000486793 TRBV6-5A0A0K0K1A5 114 aa11.63□□□□□ -0.55
GMDS-205ENST00000486793 GAS8-AS1O95177 125 aa11.63□□□□□ -0.55
GMDS-205ENST00000486793 ESDP10768 282 aa11.63□□□□□ -0.55
GMDS-205ENST00000486793 Q6ZRP5 223 aa11.63□□□□□ -0.55
GMDS-205ENST00000486793 PKIGQ9Y2B9 76 aa11.63□□□□□ -0.55
GMDS-205ENST00000486793 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms