RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 UBR1Q8IWV7 1749 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 FMN2Q9NZ56 1722 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 TOGARAM1Q9Y4F4 1720 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 AKAP12Q02952 1782 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 ANK1P16157 1881 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 MYH8P13535 1937 aa0.77□□□□□ -2.29
SMC4-218ENST00000486711 MYH9P35579 1960 aaKnown RBP0.76□□□□□ -2.29
SMC4-218ENST00000486711 LAMB1P07942 1786 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 DDX60Q8IY21 1712 aaKnown RBP0.76□□□□□ -2.29
SMC4-218ENST00000486711 C5P01031 1676 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 SCN7AQ01118 1682 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 ZNF831Q5JPB2 1677 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 TNRC6CQ9HCJ0 1690 aaKnown RBP0.76□□□□□ -2.29
SMC4-218ENST00000486711 LRP6O75581 1613 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 A0A0G2JND7 137 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 KANTRA0A1W2PQU2 76 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 TMEM218A2RU14 115 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 YPEL1O60688 119 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 SNCGO76070 127 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 LY6G6CO95867 125 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 IFNGP01579 166 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 RBP4P02753 201 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 CCKP06307 115 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 IFI6P09912 130 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 PIPP12273 146 aaPredicted RBP0.76□□□□□ -2.29
SMC4-218ENST00000486711 S100PP25815 95 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 NCS1P62166 190 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 PPP3R1P63098 170 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 C4orf33Q8N1A6 199 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 PPDPFLQ8WWR9 84 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 COPS9Q8WXC6 57 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 TCEAL4Q96EI5 215 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 SDF2Q99470 211 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 TPT1P8Q9HAU6 139 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 FAIMQ9NVQ4 179 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 ABRACLQ9P1F3 81 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 NOP16Q9Y3C1 178 aaKnown RBP0.76□□□□□ -2.29
SMC4-218ENST00000486711 Q9Y3F1 56 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 SPTBP11277 2137 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 MYH1P12882 1939 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 MYH13Q9UKX3 1938 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 MYH4Q9Y623 1939 aa0.76□□□□□ -2.29
SMC4-218ENST00000486711 WNK3Q9BYP7 1800 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 ANKRD36CQ5JPF3 1778 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 KIDINS220Q9ULH0 1771 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 PHLPP1O60346 1717 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 KIAA1551Q9HCM1 1747 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 CRYBG1Q9Y4K1 1723 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 TRBV10-1A0A0K0K1A3 114 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 LOC100130705A0A1B0GUX0 176 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 C20orf202A1L168 122 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 SNRPGP15A8MWD9 76 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 UMAD1C9J7I0 102 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 M0R129 80 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 CYB5AP00167 134 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 IFNA17P01571 189 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 UBA52P62987 128 aaKnown RBP0.75□□□□□ -2.29
SMC4-218ENST00000486711 EMX2Q04743 252 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 PEA15Q15121 130 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 SLC25A26Q70HW3 274 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 DEFB107AQ8IZN7 70 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 TOMM5Q8N4H5 51 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 KCNRGQ8N5I3 272 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 TSTD1Q8NFU3 115 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 S100A16Q96FQ6 103 aaKnown RBP0.75□□□□□ -2.29
SMC4-218ENST00000486711 PFDN5Q99471 154 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 DPY30Q9C005 99 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 RABAC1Q9UI14 185 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 DNAJC15Q9Y5T4 150 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 KDM3BQ7LBC6 1761 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 NUP188Q5SRE5 1749 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 RICTORQ6R327 1708 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 PKD1L3Q7Z443 1732 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 TIAM2Q8IVF5 1701 aa0.75□□□□□ -2.29
SMC4-218ENST00000486711 MARF1Q9Y4F3 1742 aaKnown RBP0.75□□□□□ -2.29
SMC4-218ENST00000486711 TRAV2A0A0B4J234 112 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 LOC285095A0A1B0GVY8 99 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 F6UZH7 168 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 SIX6O95475 246 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 PPP1R17O96001 155 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 LINC00032P0C843 101 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 SMIM6P0DI80 62 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 MPC1LP0DKB6 136 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 S100A3P33764 101 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 SNCAP37840 140 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 TPPP2P59282 170 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 S100A10P60903 97 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 KRTDAPP60985 99 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 SELENOWP63302 87 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 SERF2P84101 59 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 PLGLAQ15195 96 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 NCMAPQ5T1S8 102 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 COMMD6Q7Z4G1 85 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 SNX29P2Q8IUI4 249 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 MAFIPQ8WZ33 124 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 ARL11Q969Q4 196 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 NPVFQ9HCQ7 196 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 SMCO4Q9NRQ5 59 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 TMEM242Q9NWH2 141 aa0.74□□□□□ -2.29
SMC4-218ENST00000486711 CCDC167Q9P0B6 97 aa0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms