RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 B9D2Q9BPU9 175 aa10.12□□□□□ -0.79
COL9A1-207ENST00000486080 ZMAT4Q9H898 229 aa10.12□□□□□ -0.79
COL9A1-207ENST00000486080 A0A0J9YY99 117 aa10.11□□□□□ -0.79
COL9A1-207ENST00000486080 C3orf79P0CE67 100 aa10.11□□□□□ -0.79
COL9A1-207ENST00000486080 NANOS2P60321 138 aaKnown RBP10.11□□□□□ -0.79
COL9A1-207ENST00000486080 Q6ZTC4 211 aa10.11□□□□□ -0.79
COL9A1-207ENST00000486080 PAX4O43316 350 aa10.1□□□□□ -0.79
COL9A1-207ENST00000486080 GYPEP15421 78 aa10.1□□□□□ -0.79
COL9A1-207ENST00000486080 DEFA6Q01524 100 aa10.1□□□□□ -0.79
COL9A1-207ENST00000486080 VSIG2Q96IQ7 327 aa10.1□□□□□ -0.79
COL9A1-207ENST00000486080 TRAV26-1A0A087WT03 109 aa10.1□□□□□ -0.79
COL9A1-207ENST00000486080 LINC00694P0DN24 101 aa10.1□□□□□ -0.79
COL9A1-207ENST00000486080 RPL39P62891 51 aaKnown RBP10.1□□□□□ -0.79
COL9A1-207ENST00000486080 PYY3Q5JQD4 70 aa10.1□□□□□ -0.79
COL9A1-207ENST00000486080 C2orf66Q6UXQ4 117 aa10.1□□□□□ -0.79
COL9A1-207ENST00000486080 C11orf45Q8TAV5 145 aa10.1□□□□□ -0.79
COL9A1-207ENST00000486080 HSPB8Q9UJY1 196 aa10.1□□□□□ -0.79
COL9A1-207ENST00000486080 TOMM6Q96B49 74 aa10.09□□□□□ -0.79
COL9A1-207ENST00000486080 COTL1Q14019 142 aa10.08□□□□□ -0.8
COL9A1-207ENST00000486080 SPATA12Q7Z6I5 190 aa10.08□□□□□ -0.8
COL9A1-207ENST00000486080 DAZ4Q86SG3 579 aaKnown RBP10.08□□□□□ -0.8
COL9A1-207ENST00000486080 DAZ3Q9NR90 486 aaKnown RBP10.08□□□□□ -0.8
COL9A1-207ENST00000486080 NTM-AS1Q6ZSK4 140 aa10.07□□□□□ -0.8
COL9A1-207ENST00000486080 CHCHD7Q9BUK0 85 aa10.07□□□□□ -0.8
COL9A1-207ENST00000486080 H0Y8G0 127 aa10.07□□□□□ -0.8
COL9A1-207ENST00000486080 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
COL9A1-207ENST00000486080 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
COL9A1-207ENST00000486080 IFI27L1Q96BM0 104 aa10.07□□□□□ -0.8
COL9A1-207ENST00000486080 CYSLTR1Q9Y271 337 aa10.07□□□□□ -0.8
COL9A1-207ENST00000486080 STAB2Q8WWQ8 2551 aa10.07□□□□□ -0.8
COL9A1-207ENST00000486080 A0A096LPF7 62 aa10.06□□□□□ -0.8
COL9A1-207ENST00000486080 SYS1-DBNDD2H3BUS1 97 aa10.06□□□□□ -0.8
COL9A1-207ENST00000486080 SCGB1D1O95968 90 aa10.06□□□□□ -0.8
COL9A1-207ENST00000486080 CDPF1Q6NVV7 123 aa10.06□□□□□ -0.8
COL9A1-207ENST00000486080 Q8N976 141 aa10.06□□□□□ -0.8
COL9A1-207ENST00000486080 SCGB3A1Q96QR1 104 aa10.06□□□□□ -0.8
COL9A1-207ENST00000486080 MAP1LC3CQ9BXW4 147 aa10.06□□□□□ -0.8
COL9A1-207ENST00000486080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.05□□□□□ -0.8
COL9A1-207ENST00000486080 IGKV2-29A2NJV5 120 aaPredicted RBP10.05□□□□□ -0.8
COL9A1-207ENST00000486080 ATP6V0E2Q8NHE4 81 aa10.05□□□□□ -0.8
COL9A1-207ENST00000486080 G0S2P27469 103 aa10.04□□□□□ -0.8
COL9A1-207ENST00000486080 IGIPA6NJ69 53 aa10.03□□□□□ -0.8
COL9A1-207ENST00000486080 ATP5LO75964 103 aa10.03□□□□□ -0.8
COL9A1-207ENST00000486080 SMIM6P0DI80 62 aa10.03□□□□□ -0.8
COL9A1-207ENST00000486080 ERASQ7Z444 233 aa10.03□□□□□ -0.8
COL9A1-207ENST00000486080 DEFB131BA0A096LNP1 70 aa10.03□□□□□ -0.8
COL9A1-207ENST00000486080 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.03□□□□□ -0.8
COL9A1-207ENST00000486080 CEMP1Q6PRD7 247 aaPredicted RBP10.03□□□□□ -0.8
COL9A1-207ENST00000486080 LINC00518Q8N0U6 118 aa10.03□□□□□ -0.8
COL9A1-207ENST00000486080 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
COL9A1-207ENST00000486080 PMCHL2Q9BQD1 86 aa10.03□□□□□ -0.8
COL9A1-207ENST00000486080 GTSF1LQ9H1H1 148 aa10.03□□□□□ -0.8
COL9A1-207ENST00000486080 PRSS1P07477 247 aa10.02□□□□□ -0.81
COL9A1-207ENST00000486080 C12orf57Q99622 126 aa10.02□□□□□ -0.81
COL9A1-207ENST00000486080 TRBV6-8A0A0A6YYG3 113 aa10.01□□□□□ -0.81
COL9A1-207ENST00000486080 PET117Q6UWS5 81 aa10.01□□□□□ -0.81
COL9A1-207ENST00000486080 ICOSQ9Y6W8 199 aa10.01□□□□□ -0.81
COL9A1-207ENST00000486080 NHLRC4P0CG21 123 aaPredicted RBP10□□□□□ -0.81
COL9A1-207ENST00000486080 MRPL23Q16540 153 aaKnown RBP10□□□□□ -0.81
COL9A1-207ENST00000486080 ZC2HC1BQ5TFG8 222 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 BAALCQ8WXS3 180 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 TIMM17AQ99595 171 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 TRBV25-1A0A075B6N4 114 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 LINC01549A6NIU2 74 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 LINC01545Q5VT33 79 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 Q6ZN92 141 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 ATOH7Q8N100 152 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 FAM104AQ969W3 186 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 TMEM243Q9BU79 118 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 UBE2D4Q9Y2X8 147 aa10□□□□□ -0.81
COL9A1-207ENST00000486080 TMEM141Q96I45 108 aa9.99□□□□□ -0.81
COL9A1-207ENST00000486080 TRAV10A0A0B4J240 114 aa9.98□□□□□ -0.81
COL9A1-207ENST00000486080 PYGO1Q9Y3Y4 419 aa9.98□□□□□ -0.81
COL9A1-207ENST00000486080 IGLV4-3A0A075B6K6 122 aa9.98□□□□□ -0.81
COL9A1-207ENST00000486080 H3BNG1 76 aa9.98□□□□□ -0.81
COL9A1-207ENST00000486080 ODF1Q14990 250 aa9.98□□□□□ -0.81
COL9A1-207ENST00000486080 FGF6P10767 208 aa9.97□□□□□ -0.81
COL9A1-207ENST00000486080 GAGE6Q13070 117 aa9.97□□□□□ -0.81
COL9A1-207ENST00000486080 TMEM97Q5BJF2 176 aa9.97□□□□□ -0.81
COL9A1-207ENST00000486080 RNASE13Q5GAN3 156 aaKnown RBP9.97□□□□□ -0.81
COL9A1-207ENST00000486080 LGALS9CQ6DKI2 356 aa9.97□□□□□ -0.81
COL9A1-207ENST00000486080 CHCHD5Q9BSY4 110 aa9.97□□□□□ -0.81
COL9A1-207ENST00000486080 SPANXA1Q9NS26 97 aa9.97□□□□□ -0.81
COL9A1-207ENST00000486080 C20orf202A1L168 122 aa9.96□□□□□ -0.81
COL9A1-207ENST00000486080 PRSS29PA6NIE9 313 aa9.96□□□□□ -0.81
COL9A1-207ENST00000486080 UBE2L6O14933 153 aa9.96□□□□□ -0.81
COL9A1-207ENST00000486080 TEX43Q6ZNM6 134 aa9.96□□□□□ -0.81
COL9A1-207ENST00000486080 TGP01266 2768 aa9.96□□□□□ -0.82
COL9A1-207ENST00000486080 A0A087WX48 190 aa9.96□□□□□ -0.82
COL9A1-207ENST00000486080 TRAV12-1A0A0B4J245 112 aa9.96□□□□□ -0.82
COL9A1-207ENST00000486080 Q6ZUT4 128 aa9.96□□□□□ -0.82
COL9A1-207ENST00000486080 SH2D6Q7Z4S9 175 aa9.96□□□□□ -0.82
COL9A1-207ENST00000486080 CST9LQ9H4G1 147 aa9.96□□□□□ -0.82
COL9A1-207ENST00000486080 MRPL35Q9NZE8 188 aaKnown RBP9.96□□□□□ -0.82
COL9A1-207ENST00000486080 PMVKQ15126 192 aa9.95□□□□□ -0.82
COL9A1-207ENST00000486080 MAJINQ3KP22 176 aa9.95□□□□□ -0.82
COL9A1-207ENST00000486080 MRPL52Q86TS9 123 aaKnown RBP9.95□□□□□ -0.82
COL9A1-207ENST00000486080 TIMM21Q9BVV7 248 aa9.95□□□□□ -0.82
COL9A1-207ENST00000486080 AMMECR1LQ6DCA0 310 aa9.94□□□□□ -0.82
COL9A1-207ENST00000486080 DGAT2L7PQ6IED9 249 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms