RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 TRAV6A0A075B6T7 132 aa3.86□□□□□ -1.79
SMC4-217ENST00000485867 GRIFINA4D1Z8 144 aa3.86□□□□□ -1.79
SMC4-217ENST00000485867 FABP5P3A8MUU1 101 aa3.86□□□□□ -1.79
SMC4-217ENST00000485867 TPT1P13693 172 aaKnown RBP3.86□□□□□ -1.79
SMC4-217ENST00000485867 SULT1A2P50226 295 aa3.86□□□□□ -1.79
SMC4-217ENST00000485867 CYCSP99999 105 aaKnown RBP3.86□□□□□ -1.79
SMC4-217ENST00000485867 SPCS2Q15005 226 aa3.86□□□□□ -1.79
SMC4-217ENST00000485867 TPRXLQ17RH7 258 aa3.86□□□□□ -1.79
SMC4-217ENST00000485867 ZFP82Q8N141 532 aa3.86□□□□□ -1.79
SMC4-217ENST00000485867 C5orf17Q8NAS9 161 aa3.86□□□□□ -1.79
SMC4-217ENST00000485867 CARD19Q96LW7 228 aa3.86□□□□□ -1.79
SMC4-217ENST00000485867 AQP10Q96PS8 301 aa3.86□□□□□ -1.79
SMC4-217ENST00000485867 WDR61Q9GZS3 305 aaKnown RBP3.86□□□□□ -1.79
SMC4-217ENST00000485867 FAM25EA8MYX2 175 aa3.85□□□□□ -1.79
SMC4-217ENST00000485867 KRBOX1C9JBD0 128 aa3.85□□□□□ -1.79
SMC4-217ENST00000485867 C17orf112F2Z3M2 114 aa3.85□□□□□ -1.79
SMC4-217ENST00000485867 K7EQM0 130 aa3.85□□□□□ -1.79
SMC4-217ENST00000485867 M0R036 132 aa3.85□□□□□ -1.79
SMC4-217ENST00000485867 GAGE2BQ13066 116 aa3.85□□□□□ -1.79
SMC4-217ENST00000485867 C9orf116Q5BN46 136 aaPredicted RBP3.85□□□□□ -1.79
SMC4-217ENST00000485867 SAPCD1Q5SSQ6 148 aa3.85□□□□□ -1.79
SMC4-217ENST00000485867 PQLC2Q6ZP29 291 aa3.85□□□□□ -1.79
SMC4-217ENST00000485867 PHF5AQ7RTV0 110 aaKnown RBP3.85□□□□□ -1.79
SMC4-217ENST00000485867 LINC00526Q96FQ7 95 aa3.85□□□□□ -1.79
SMC4-217ENST00000485867 CTDSP1Q9GZU7 261 aa3.85□□□□□ -1.79
SMC4-217ENST00000485867 PYDC2Q56P42 97 aa3.84□□□□□ -1.79
SMC4-217ENST00000485867 LCE3CQ5T5A8 94 aa3.84□□□□□ -1.79
SMC4-217ENST00000485867 KRTAP11-1Q8IUC1 163 aa3.84□□□□□ -1.79
SMC4-217ENST00000485867 CHCHD10Q8WYQ3 142 aaPredicted RBP3.84□□□□□ -1.79
SMC4-217ENST00000485867 TMEM243Q9BU79 118 aa3.84□□□□□ -1.79
SMC4-217ENST00000485867 CARHSP1Q9Y2V2 147 aaKnown RBP3.84□□□□□ -1.79
SMC4-217ENST00000485867 ARL2-SNX15V9GYD0 113 aa3.84□□□□□ -1.79
SMC4-217ENST00000485867 IGKV3OR2-268A0A0C4DH90 116 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 LOC107984640A0A0U1RRK4 108 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 SH2D1AO60880 128 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 ATP6V1G2O95670 118 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 CRYGAP11844 174 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 CRIP1P50238 77 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 TMBIM6P55061 237 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 EIF5AP63241 154 aaKnown RBP3.83□□□□□ -1.8
SMC4-217ENST00000485867 SYCNQ0VAF6 134 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 IL15RAQ13261 267 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 ZNF674Q2M3X9 581 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 RETNLBQ9BQ08 111 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 EPDR1Q9UM22 224 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 V9GYH0 126 aa3.83□□□□□ -1.8
SMC4-217ENST00000485867 A0A087WZ39 114 aa3.82□□□□□ -1.8
SMC4-217ENST00000485867 TMSB15BA0A087X1C1 80 aa3.82□□□□□ -1.8
SMC4-217ENST00000485867 TRAV34A0A0B4J273 112 aa3.82□□□□□ -1.8
SMC4-217ENST00000485867 IGHV1-58A0A0C4DH39 117 aa3.82□□□□□ -1.8
SMC4-217ENST00000485867 HMGB3O15347 200 aaKnown RBP3.82□□□□□ -1.8
SMC4-217ENST00000485867 ARL14EPLP0DKL9 152 aa3.82□□□□□ -1.8
SMC4-217ENST00000485867 OR10AG1Q8NH19 301 aa3.82□□□□□ -1.8
SMC4-217ENST00000485867 SDHCQ99643 169 aaPredicted RBP3.82□□□□□ -1.8
SMC4-217ENST00000485867 KRTAP4-1Q9BYQ7 146 aa3.82□□□□□ -1.8
SMC4-217ENST00000485867 RPP21Q9H633 154 aaKnown RBP3.82□□□□□ -1.8
SMC4-217ENST00000485867 A0A1W2PPV4 95 aa3.81□□□□□ -1.8
SMC4-217ENST00000485867 NAP1L6A6NFF2 107 aa3.81□□□□□ -1.8
SMC4-217ENST00000485867 BCL2P10415 239 aa3.81□□□□□ -1.8
SMC4-217ENST00000485867 FGF6P10767 208 aa3.81□□□□□ -1.8
SMC4-217ENST00000485867 BTCP35070 178 aa3.81□□□□□ -1.8
SMC4-217ENST00000485867 Q86TA4 180 aa3.81□□□□□ -1.8
SMC4-217ENST00000485867 KRTAP7-1Q8IUC3 87 aa3.81□□□□□ -1.8
SMC4-217ENST00000485867 IGLV7-46A0A075B6I9 117 aa3.8□□□□□ -1.8
SMC4-217ENST00000485867 H3BMQ9 156 aa3.8□□□□□ -1.8
SMC4-217ENST00000485867 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.8□□□□□ -1.8
SMC4-217ENST00000485867 UBE2L6O14933 153 aa3.8□□□□□ -1.8
SMC4-217ENST00000485867 CAMPP49913 170 aa3.8□□□□□ -1.8
SMC4-217ENST00000485867 MEF2BQ02080 365 aaPredicted RBP3.8□□□□□ -1.8
SMC4-217ENST00000485867 PAPPA-AS1Q5QFB9 102 aa3.8□□□□□ -1.8
SMC4-217ENST00000485867 FAM162BQ5T6X4 162 aa3.8□□□□□ -1.8
SMC4-217ENST00000485867 COX8CQ7Z4L0 72 aa3.8□□□□□ -1.8
SMC4-217ENST00000485867 PGLYRP4Q96LB8 373 aa3.8□□□□□ -1.8
SMC4-217ENST00000485867 MED28Q9H204 178 aa3.8□□□□□ -1.8
SMC4-217ENST00000485867 A0A087X002 238 aa3.79□□□□□ -1.8
SMC4-217ENST00000485867 M0QY20 66 aa3.79□□□□□ -1.8
SMC4-217ENST00000485867 APOMO95445 188 aa3.79□□□□□ -1.8
SMC4-217ENST00000485867 GCHFRP30047 84 aa3.79□□□□□ -1.8
SMC4-217ENST00000485867 RPL12P30050 165 aaKnown RBP3.79□□□□□ -1.8
SMC4-217ENST00000485867 RPL18AQ02543 176 aaKnown RBP3.79□□□□□ -1.8
SMC4-217ENST00000485867 ASB16-AS1Q495Z4 193 aa3.79□□□□□ -1.8
SMC4-217ENST00000485867 NUP35Q8NFH5 326 aa3.79□□□□□ -1.8
SMC4-217ENST00000485867 SEC22CQ9BRL7 303 aa3.79□□□□□ -1.8
SMC4-217ENST00000485867 ZNF471Q9BX82 626 aaPredicted RBP3.79□□□□□ -1.8
SMC4-217ENST00000485867 IGLV4-69A0A075B6H9 119 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 MUC21A0A140T8X8 626 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 SNAI2O43623 268 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 STAG3L2P0CL84 134 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 STAG3L3P0CL85 134 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 XCL1P47992 114 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 CDC34P49427 236 aaPredicted RBP3.78□□□□□ -1.8
SMC4-217ENST00000485867 NKX2-5P52952 324 aaPredicted RBP3.78□□□□□ -1.8
SMC4-217ENST00000485867 DEFA3P59666 94 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 SVIPQ8NHG7 77 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 TYMSOSQ8TAI1 123 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 SCGB1C1Q8TD33 95 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 TSKUQ8WUA8 353 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 ISOC2Q96AB3 205 aa3.78□□□□□ -1.8
SMC4-217ENST00000485867 FAM168BA1KXE4 195 aa3.77□□□□□ -1.81
SMC4-217ENST00000485867 PEX7O00628 323 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms