RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 NIT1Q86X76 327 aa13.53□□□□□ -0.24
COL6A2-208ENST00000485591 TRAV9-2A0A087WT02 112 aa13.52□□□□□ -0.25
COL6A2-208ENST00000485591 APCSP02743 223 aa13.52□□□□□ -0.25
COL6A2-208ENST00000485591 AMTP48728 403 aa13.52□□□□□ -0.25
COL6A2-208ENST00000485591 CHCHD5Q9BSY4 110 aa13.52□□□□□ -0.25
COL6A2-208ENST00000485591 VCYO14598 125 aa13.51□□□□□ -0.25
COL6A2-208ENST00000485591 PKIAP61925 76 aa13.51□□□□□ -0.25
COL6A2-208ENST00000485591 DEFB104AQ8WTQ1 72 aa13.51□□□□□ -0.25
COL6A2-208ENST00000485591 TMEM243Q9BU79 118 aa13.51□□□□□ -0.25
COL6A2-208ENST00000485591 CHCHD7Q9BUK0 85 aa13.51□□□□□ -0.25
COL6A2-208ENST00000485591 TSHBP01222 138 aa13.5□□□□□ -0.25
COL6A2-208ENST00000485591 IGHV3-30P01768 117 aa13.5□□□□□ -0.25
COL6A2-208ENST00000485591 IGHV3-33P01772 117 aa13.5□□□□□ -0.25
COL6A2-208ENST00000485591 IGHV3-30-3P0DP02 117 aa13.5□□□□□ -0.25
COL6A2-208ENST00000485591 IGHV3-30-5P0DP03 117 aa13.5□□□□□ -0.25
COL6A2-208ENST00000485591 C10orf126Q8N4M7 172 aa13.5□□□□□ -0.25
COL6A2-208ENST00000485591 SMIM2Q9BVW6 85 aa13.5□□□□□ -0.25
COL6A2-208ENST00000485591 Q8N3U1 123 aa13.49□□□□□ -0.25
COL6A2-208ENST00000485591 MRPL18Q9H0U6 180 aaKnown RBP13.49□□□□□ -0.25
COL6A2-208ENST00000485591 RYR3Q15413 4870 aa13.49□□□□□ -0.25
COL6A2-208ENST00000485591 A0A087WX48 190 aa13.48□□□□□ -0.25
COL6A2-208ENST00000485591 PRSS47A8MTI9 375 aa13.48□□□□□ -0.25
COL6A2-208ENST00000485591 KIAA1644Q3SXP7 199 aa13.48□□□□□ -0.25
COL6A2-208ENST00000485591 KIR2DL4Q99706 377 aa13.48□□□□□ -0.25
COL6A2-208ENST00000485591 TMEM262E9PQX1 116 aa13.47□□□□□ -0.25
COL6A2-208ENST00000485591 BTF3P20290 206 aaKnown RBP13.47□□□□□ -0.25
COL6A2-208ENST00000485591 MAP1LC3AQ9H492 121 aa13.47□□□□□ -0.25
COL6A2-208ENST00000485591 ESDP10768 282 aa13.46□□□□□ -0.25
COL6A2-208ENST00000485591 FCER1GP30273 86 aa13.46□□□□□ -0.25
COL6A2-208ENST00000485591 GAGE6Q13070 117 aa13.46□□□□□ -0.25
COL6A2-208ENST00000485591 MPV17L2Q567V2 206 aa13.46□□□□□ -0.25
COL6A2-208ENST00000485591 TRAPPC1Q9Y5R8 145 aa13.46□□□□□ -0.25
COL6A2-208ENST00000485591 IBA57-AS1B1ANH7 110 aa13.45□□□□□ -0.26
COL6A2-208ENST00000485591 H7C423 109 aa13.45□□□□□ -0.26
COL6A2-208ENST00000485591 UBE2L6O14933 153 aa13.45□□□□□ -0.26
COL6A2-208ENST00000485591 TCAPO15273 167 aa13.45□□□□□ -0.26
COL6A2-208ENST00000485591 FABP9Q0Z7S8 132 aa13.45□□□□□ -0.26
COL6A2-208ENST00000485591 LAGE3Q14657 143 aa13.45□□□□□ -0.26
COL6A2-208ENST00000485591 C1orf134Q5TEV5 83 aa13.45□□□□□ -0.26
COL6A2-208ENST00000485591 C6orf223Q8N319 242 aa13.45□□□□□ -0.26
COL6A2-208ENST00000485591 ALKBH7Q9BT30 221 aaPredicted RBP13.44□□□□□ -0.26
COL6A2-208ENST00000485591 RBX1P62877 108 aa13.43□□□□□ -0.26
COL6A2-208ENST00000485591 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.42□□□□□ -0.26
COL6A2-208ENST00000485591 LOC389332A0A1B0GUA5 103 aa13.42□□□□□ -0.26
COL6A2-208ENST00000485591 A0A1B0GUV1 79 aa13.42□□□□□ -0.26
COL6A2-208ENST00000485591 IGKV2-29A2NJV5 120 aaPredicted RBP13.42□□□□□ -0.26
COL6A2-208ENST00000485591 ATP6V1G1O75348 118 aa13.42□□□□□ -0.26
COL6A2-208ENST00000485591 Q8N976 141 aa13.42□□□□□ -0.26
COL6A2-208ENST00000485591 S100A1P23297 94 aa13.41□□□□□ -0.26
COL6A2-208ENST00000485591 Q8N8P6 123 aa13.41□□□□□ -0.26
COL6A2-208ENST00000485591 KLK12Q9UKR0 248 aa13.41□□□□□ -0.26
COL6A2-208ENST00000485591 RTL8CO15255 209 aa13.4□□□□□ -0.26
COL6A2-208ENST00000485591 SCO1O75880 301 aa13.4□□□□□ -0.26
COL6A2-208ENST00000485591 NFE4Q86UQ8 179 aa13.4□□□□□ -0.26
COL6A2-208ENST00000485591 NXT2Q9NPJ8 142 aaKnown RBP13.4□□□□□ -0.26
COL6A2-208ENST00000485591 ANGP03950 147 aaKnown RBP13.39□□□□□ -0.27
COL6A2-208ENST00000485591 FGF6P10767 208 aa13.39□□□□□ -0.27
COL6A2-208ENST00000485591 RAB5AP20339 215 aa13.39□□□□□ -0.27
COL6A2-208ENST00000485591 AMMECR1LQ6DCA0 310 aa13.39□□□□□ -0.27
COL6A2-208ENST00000485591 IGLV4-60A0A075B6I1 120 aa13.38□□□□□ -0.27
COL6A2-208ENST00000485591 TRAV8-3A0A0A6YYJ7 113 aa13.38□□□□□ -0.27
COL6A2-208ENST00000485591 COLCA2A8K830 154 aa13.38□□□□□ -0.27
COL6A2-208ENST00000485591 K7EMI3 77 aa13.38□□□□□ -0.27
COL6A2-208ENST00000485591 ZNF25P17030 456 aaPredicted RBP13.38□□□□□ -0.27
COL6A2-208ENST00000485591 C20orf203Q8NBC4 194 aa13.38□□□□□ -0.27
COL6A2-208ENST00000485591 IFI27P40305 119 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-208ENST00000485591 Q6ZRN7 208 aaPredicted RBP13.37□□□□□ -0.27
COL6A2-208ENST00000485591 MRPL52Q86TS9 123 aaKnown RBP13.37□□□□□ -0.27
COL6A2-208ENST00000485591 TMEM18Q96B42 140 aa13.37□□□□□ -0.27
COL6A2-208ENST00000485591 Q9HAA7 133 aa13.37□□□□□ -0.27
COL6A2-208ENST00000485591 RNASEKQ6P5S7 137 aaKnown RBP13.36□□□□□ -0.27
COL6A2-208ENST00000485591 UBE2WQ96B02 151 aa13.36□□□□□ -0.27
COL6A2-208ENST00000485591 PRR34Q9NV39 138 aa13.36□□□□□ -0.27
COL6A2-208ENST00000485591 CRPP02741 224 aa13.35□□□□□ -0.27
COL6A2-208ENST00000485591 SMAGPQ0VAQ4 97 aa13.35□□□□□ -0.27
COL6A2-208ENST00000485591 Q0VG73 95 aa13.35□□□□□ -0.27
COL6A2-208ENST00000485591 ENHOQ6UWT2 76 aa13.35□□□□□ -0.27
COL6A2-208ENST00000485591 LINC00336Q6ZUF6 198 aa13.35□□□□□ -0.27
COL6A2-208ENST00000485591 ORMDL2Q53FV1 153 aa13.34□□□□□ -0.27
COL6A2-208ENST00000485591 LINC00269Q8N2A0 174 aa13.34□□□□□ -0.27
COL6A2-208ENST00000485591 PRSS3P2Q8NHM4 247 aa13.34□□□□□ -0.27
COL6A2-208ENST00000485591 C18orf32Q8TCD1 76 aa13.34□□□□□ -0.27
COL6A2-208ENST00000485591 TMEM101Q96IK0 257 aa13.34□□□□□ -0.27
COL6A2-208ENST00000485591 TIMM21Q9BVV7 248 aa13.34□□□□□ -0.27
COL6A2-208ENST00000485591 UBE2D4Q9Y2X8 147 aa13.34□□□□□ -0.27
COL6A2-208ENST00000485591 REG3AQ06141 175 aa13.33□□□□□ -0.28
COL6A2-208ENST00000485591 OR5A1Q8NGJ0 315 aa13.33□□□□□ -0.28
COL6A2-208ENST00000485591 CSDC2Q9Y534 153 aaKnown RBP13.33□□□□□ -0.28
COL6A2-208ENST00000485591 LINC01546A6NGU7 62 aa13.32□□□□□ -0.28
COL6A2-208ENST00000485591 TRGC2P03986 189 aa13.32□□□□□ -0.28
COL6A2-208ENST00000485591 RPL39P62891 51 aaKnown RBP13.32□□□□□ -0.28
COL6A2-208ENST00000485591 MIAQ16674 131 aa13.32□□□□□ -0.28
COL6A2-208ENST00000485591 CLPSL2Q6UWE3 100 aa13.32□□□□□ -0.28
COL6A2-208ENST00000485591 RMI2Q96E14 147 aa13.32□□□□□ -0.28
COL6A2-208ENST00000485591 TM2D2Q9BX73 214 aa13.31□□□□□ -0.28
COL6A2-208ENST00000485591 PRSS29PA6NIE9 313 aa13.3□□□□□ -0.28
COL6A2-208ENST00000485591 DGAT2L7PQ6IED9 249 aa13.3□□□□□ -0.28
COL6A2-208ENST00000485591 CDC42SE2Q9NRR3 84 aa13.3□□□□□ -0.28
COL6A2-208ENST00000485591 SPANXA1Q9NS26 97 aa13.3□□□□□ -0.28
COL6A2-208ENST00000485591 COX11Q9Y6N1 276 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms