RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 TRAV6A0A075B6T7 132 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 IGHV1-24A0A0C4DH33 117 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 C9orf170A2RU37 121 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 GRIFINA4D1Z8 144 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 B4DEV8 164 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 TSHBP01222 138 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 BCL2P10415 239 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 S100A11P31949 105 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 RAB4BP61018 213 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 SYCNQ0VAF6 134 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 IQCJQ1A5X6 159 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 ASB16-AS1Q495Z4 193 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 SDHCQ99643 169 aaPredicted RBP3.07□□□□□ -1.92
PTPN4-210ENST00000485247 VCX3BQ9H321 246 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 PPDPFQ9H3Y8 114 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 PSG8Q9UQ74 426 aa3.07□□□□□ -1.92
PTPN4-210ENST00000485247 LSM5Q9Y4Y9 91 aaKnown RBP3.07□□□□□ -1.92
PTPN4-210ENST00000485247 A0A087X002 238 aa3.06□□□□□ -1.92
PTPN4-210ENST00000485247 LOC107984640A0A0U1RRK4 108 aa3.06□□□□□ -1.92
PTPN4-210ENST00000485247 M0R036 132 aa3.06□□□□□ -1.92
PTPN4-210ENST00000485247 FAUP35544 74 aaKnown RBP3.06□□□□□ -1.92
PTPN4-210ENST00000485247 SULT1A1P50225 295 aa3.06□□□□□ -1.92
PTPN4-210ENST00000485247 SPCS2Q15005 226 aa3.06□□□□□ -1.92
PTPN4-210ENST00000485247 LINC00173Q6ZV60 143 aa3.06□□□□□ -1.92
PTPN4-210ENST00000485247 PRNTQ86SH4 94 aa3.06□□□□□ -1.92
PTPN4-210ENST00000485247 TYMSOSQ8TAI1 123 aa3.06□□□□□ -1.92
PTPN4-210ENST00000485247 CHCHD10Q8WYQ3 142 aaPredicted RBP3.06□□□□□ -1.92
PTPN4-210ENST00000485247 LITAFQ99732 161 aa3.06□□□□□ -1.92
PTPN4-210ENST00000485247 SLC25A21Q9BQT8 299 aaPredicted RBP3.06□□□□□ -1.92
PTPN4-210ENST00000485247 FUNDC2Q9BWH2 189 aa3.06□□□□□ -1.92
PTPN4-210ENST00000485247 NAA50Q9GZZ1 169 aaKnown RBP3.06□□□□□ -1.92
PTPN4-210ENST00000485247 IGSF23A1L1A6 192 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 FABP5P3A8MUU1 101 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 TCRAP04437 139 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 FGF6P10767 208 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 TPT1P13693 172 aaKnown RBP3.05□□□□□ -1.92
PTPN4-210ENST00000485247 HBG1P69891 147 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 HBG2P69892 147 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 FLI1Q01543 452 aaPredicted RBP3.05□□□□□ -1.92
PTPN4-210ENST00000485247 KHDC3LQ587J8 217 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 EIF5AL1Q6IS14 154 aaKnown RBP3.05□□□□□ -1.92
PTPN4-210ENST00000485247 STX12Q86Y82 276 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 ZFP82Q8N141 532 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 LINC00337Q8N6G1 96 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 TMEM252Q8N6L7 170 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 TMEM243Q9BU79 118 aa3.05□□□□□ -1.92
PTPN4-210ENST00000485247 TMSB15BA0A087X1C1 80 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 IGLV9-49A0A0B4J1Y8 123 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 TRAV34A0A0B4J273 112 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 IGHV1-58A0A0C4DH39 117 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 KRBOX1C9JBD0 128 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 K7EQM0 130 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 UBE2L6O14933 153 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 TAS2R45P59539 299 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 RPL18AQ02543 176 aaKnown RBP3.04□□□□□ -1.92
PTPN4-210ENST00000485247 ATP6V1FQ16864 119 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 KRTAP19-2Q3LHN2 52 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 LBHQ53QV2 105 aaPredicted RBP3.04□□□□□ -1.92
PTPN4-210ENST00000485247 SAPCD1Q5SSQ6 148 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 KRTAP5-1Q6L8H4 278 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 TOMM5Q8N4H5 51 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 OR5C1Q8NGR4 320 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 C11orf1Q9H5F2 150 aa3.04□□□□□ -1.92
PTPN4-210ENST00000485247 SERTM2A0A1B0GWG4 89 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 FAM168BA1KXE4 195 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 FAM25EA8MYX2 175 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.03□□□□□ -1.92
PTPN4-210ENST00000485247 HMGB3O15347 200 aaKnown RBP3.03□□□□□ -1.92
PTPN4-210ENST00000485247 APOMO95445 188 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 PVALBP20472 110 aaPredicted RBP3.03□□□□□ -1.92
PTPN4-210ENST00000485247 RPL12P30050 165 aaKnown RBP3.03□□□□□ -1.92
PTPN4-210ENST00000485247 XCL1P47992 114 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 TMBIM6P55061 237 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 DEFA3P59666 94 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 MEF2BQ02080 365 aaPredicted RBP3.03□□□□□ -1.92
PTPN4-210ENST00000485247 DNLZQ5SXM8 178 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 PET117Q6UWS5 81 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 C5orf17Q8NAS9 161 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 TSKUQ8WUA8 353 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 ISOC2Q96AB3 205 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 Q9H521 79 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 VCX3AQ9NNX9 186 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 KCNIP2Q9NS61 270 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 RSL24D1Q9UHA3 163 aaKnown RBP3.03□□□□□ -1.92
PTPN4-210ENST00000485247 FLVCR2Q9UPI3 526 aa3.03□□□□□ -1.92
PTPN4-210ENST00000485247 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
PTPN4-210ENST00000485247 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 SMIM1B2RUZ4 78 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 M0R2T5 61 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 ZNF861PO60384 105 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 CRIP1P50238 77 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 AP3S2P59780 193 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 SSTP61278 116 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 UBE2BP63146 152 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 FAM19A5Q7Z5A7 132 aaPredicted RBP3.02□□□□□ -1.93
PTPN4-210ENST00000485247 LINC00304Q8N9R0 145 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 NUP35Q8NFH5 326 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 OCC1Q8TAD7 63 aa3.02□□□□□ -1.93
PTPN4-210ENST00000485247 CAMK2N2Q96S95 79 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms