RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
HDAC1-209ENST00000484305 FAM30AQ9NZY2 134 aa8.47□□□□□ -1.05
HDAC1-209ENST00000484305 HIGD1CA8MV81 97 aa8.46□□□□□ -1.06
HDAC1-209ENST00000484305 MIAQ16674 131 aa8.46□□□□□ -1.06
HDAC1-209ENST00000484305 TMEM241Q24JQ0 296 aa8.46□□□□□ -1.06
HDAC1-209ENST00000484305 FRZBQ92765 325 aa8.46□□□□□ -1.06
HDAC1-209ENST00000484305 GFRA4Q9GZZ7 299 aa8.46□□□□□ -1.06
HDAC1-209ENST00000484305 V9GYV3 84 aa8.46□□□□□ -1.06
HDAC1-209ENST00000484305 A0A1B0GUT8 65 aa8.45□□□□□ -1.06
HDAC1-209ENST00000484305 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
HDAC1-209ENST00000484305 SMR3BP02814 79 aaPredicted RBP8.45□□□□□ -1.06
HDAC1-209ENST00000484305 RPL23P62829 140 aaKnown RBP8.45□□□□□ -1.06
HDAC1-209ENST00000484305 COTL1Q14019 142 aa8.45□□□□□ -1.06
HDAC1-209ENST00000484305 LINC01620Q4KN68 170 aa8.45□□□□□ -1.06
HDAC1-209ENST00000484305 C20orf203Q8NBC4 194 aa8.45□□□□□ -1.06
HDAC1-209ENST00000484305 ISOC2Q96AB3 205 aa8.45□□□□□ -1.06
HDAC1-209ENST00000484305 IGLV4-60A0A075B6I1 120 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 A0A1B0GUV1 79 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 FAM231BA6NCW3 169 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 GAS8-AS1O95177 125 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 HLA-DQA1P01909 254 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 AMTP48728 403 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 REG3AQ06141 175 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 FAM74A3Q4VXF1 159 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 C4orf48Q5BLP8 95 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 KRTAP26-1Q6PEX3 210 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 BORCS7Q96B45 105 aa8.44□□□□□ -1.06
HDAC1-209ENST00000484305 UBE2L6O14933 153 aa8.43□□□□□ -1.06
HDAC1-209ENST00000484305 PEA15Q15121 130 aa8.43□□□□□ -1.06
HDAC1-209ENST00000484305 TMEM191AQ9H0A3 160 aa8.43□□□□□ -1.06
HDAC1-209ENST00000484305 NAT8Q9UHE5 227 aa8.43□□□□□ -1.06
HDAC1-209ENST00000484305 IGLV10-54A0A075B6I4 117 aa8.42□□□□□ -1.06
HDAC1-209ENST00000484305 SDHAF1A6NFY7 115 aa8.42□□□□□ -1.06
HDAC1-209ENST00000484305 USP17L23D6RBM5 183 aa8.42□□□□□ -1.06
HDAC1-209ENST00000484305 ADIRFQ15847 76 aa8.42□□□□□ -1.06
HDAC1-209ENST00000484305 Q5VSD8 79 aa8.42□□□□□ -1.06
HDAC1-209ENST00000484305 Q6ZSA8 131 aa8.42□□□□□ -1.06
HDAC1-209ENST00000484305 NUP35Q8NFH5 326 aa8.42□□□□□ -1.06
HDAC1-209ENST00000484305 RNF185Q96GF1 192 aa8.42□□□□□ -1.06
HDAC1-209ENST00000484305 FAT1Q14517 4588 aa8.42□□□□□ -1.06
HDAC1-209ENST00000484305 DNAH8Q96JB1 4490 aa8.42□□□□□ -1.06
HDAC1-209ENST00000484305 RAB4AP20338 218 aa8.41□□□□□ -1.06
HDAC1-209ENST00000484305 C14orf177Q52M58 125 aa8.41□□□□□ -1.06
HDAC1-209ENST00000484305 SMDT1Q9H4I9 107 aa8.41□□□□□ -1.06
HDAC1-209ENST00000484305 TRBV6-5A0A0K0K1A5 114 aa8.4□□□□□ -1.06
HDAC1-209ENST00000484305 NCR2O95944 276 aa8.4□□□□□ -1.06
HDAC1-209ENST00000484305 PRSS1P07477 247 aa8.4□□□□□ -1.06
HDAC1-209ENST00000484305 RPS10P46783 165 aaKnown RBP8.4□□□□□ -1.06
HDAC1-209ENST00000484305 AMN1Q8IY45 258 aa8.4□□□□□ -1.06
HDAC1-209ENST00000484305 NAT8BQ9UHF3 227 aa8.4□□□□□ -1.06
HDAC1-209ENST00000484305 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.39□□□□□ -1.07
HDAC1-209ENST00000484305 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
HDAC1-209ENST00000484305 SMIM27A0A1W2PRY6 76 aa8.39□□□□□ -1.07
HDAC1-209ENST00000484305 IGKV2-29A2NJV5 120 aaPredicted RBP8.39□□□□□ -1.07
HDAC1-209ENST00000484305 I3L3M4 83 aa8.39□□□□□ -1.07
HDAC1-209ENST00000484305 APCSP02743 223 aa8.39□□□□□ -1.07
HDAC1-209ENST00000484305 PMCHP20382 165 aa8.39□□□□□ -1.07
HDAC1-209ENST00000484305 RIGQ13278 110 aa8.39□□□□□ -1.07
HDAC1-209ENST00000484305 ST20Q9HBF5 79 aa8.39□□□□□ -1.07
HDAC1-209ENST00000484305 SMKR1H3BMG3 65 aa8.38□□□□□ -1.07
HDAC1-209ENST00000484305 AMMECR1LQ6DCA0 310 aa8.38□□□□□ -1.07
HDAC1-209ENST00000484305 MRAP2Q96G30 205 aa8.38□□□□□ -1.07
HDAC1-209ENST00000484305 IGKV3OR2-268A0A0C4DH90 116 aa8.37□□□□□ -1.07
HDAC1-209ENST00000484305 FAM229AH3BQW9 127 aa8.37□□□□□ -1.07
HDAC1-209ENST00000484305 H7C423 109 aa8.37□□□□□ -1.07
HDAC1-209ENST00000484305 TSHBP01222 138 aa8.37□□□□□ -1.07
HDAC1-209ENST00000484305 FGF6P10767 208 aa8.37□□□□□ -1.07
HDAC1-209ENST00000484305 POLR2KP53803 58 aaKnown RBP8.37□□□□□ -1.07
HDAC1-209ENST00000484305 RNASEKQ6P5S7 137 aaKnown RBP8.37□□□□□ -1.07
HDAC1-209ENST00000484305 TMEM242Q9NWH2 141 aa8.37□□□□□ -1.07
HDAC1-209ENST00000484305 INAFM2P0DMQ5 153 aa8.36□□□□□ -1.07
HDAC1-209ENST00000484305 TRBV27A0A0K0K1C4 114 aa8.35□□□□□ -1.07
HDAC1-209ENST00000484305 ESDP10768 282 aa8.35□□□□□ -1.07
HDAC1-209ENST00000484305 CAMPP49913 170 aa8.35□□□□□ -1.07
HDAC1-209ENST00000484305 FAM104BQ5XKR9 115 aa8.35□□□□□ -1.07
HDAC1-209ENST00000484305 DGAT2L7PQ6IED9 249 aa8.35□□□□□ -1.07
HDAC1-209ENST00000484305 SCXQ7RTU7 201 aa8.35□□□□□ -1.07
HDAC1-209ENST00000484305 NRACQ8N912 160 aa8.35□□□□□ -1.07
HDAC1-209ENST00000484305 SRRM2Q9UQ35 2752 aaKnown RBP8.34□□□□□ -1.07
HDAC1-209ENST00000484305 VPS13BQ7Z7G8 4022 aa8.34□□□□□ -1.07
HDAC1-209ENST00000484305 GAGE12HA6NDE8 117 aa8.34□□□□□ -1.07
HDAC1-209ENST00000484305 MRPL51Q4U2R6 128 aaKnown RBP8.34□□□□□ -1.07
HDAC1-209ENST00000484305 C9orf163Q8N9P6 203 aa8.34□□□□□ -1.07
HDAC1-209ENST00000484305 CLRN3Q8NCR9 226 aa8.34□□□□□ -1.07
HDAC1-209ENST00000484305 CHAC1Q9BUX1 264 aa8.34□□□□□ -1.07
HDAC1-209ENST00000484305 A0A1B0GW15 77 aa8.33□□□□□ -1.08
HDAC1-209ENST00000484305 hDV102S1A0JD36 115 aa8.33□□□□□ -1.08
HDAC1-209ENST00000484305 VCYO14598 125 aa8.33□□□□□ -1.08
HDAC1-209ENST00000484305 ZNF25P17030 456 aaPredicted RBP8.33□□□□□ -1.08
HDAC1-209ENST00000484305 SUMO2P61956 95 aaKnown RBP8.33□□□□□ -1.08
HDAC1-209ENST00000484305 MRPL54Q6P161 138 aaKnown RBP8.33□□□□□ -1.08
HDAC1-209ENST00000484305 LINC00528Q8N1L1 170 aa8.33□□□□□ -1.08
HDAC1-209ENST00000484305 CIRBP-AS1Q8TBR5 109 aa8.33□□□□□ -1.08
HDAC1-209ENST00000484305 CHCHD10Q8WYQ3 142 aaPredicted RBP8.33□□□□□ -1.08
HDAC1-209ENST00000484305 PPP1R17O96001 155 aa8.32□□□□□ -1.08
HDAC1-209ENST00000484305 RAB14P61106 215 aa8.32□□□□□ -1.08
HDAC1-209ENST00000484305 LCE2AQ5TA79 106 aaPredicted RBP8.32□□□□□ -1.08
HDAC1-209ENST00000484305 OR5A1Q8NGJ0 315 aa8.32□□□□□ -1.08
HDAC1-209ENST00000484305 TMEM101Q96IK0 257 aa8.32□□□□□ -1.08
HDAC1-209ENST00000484305 BTF3L4Q96K17 158 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms