RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 TRAV10A0A0B4J240 114 aa9.82□□□□□ -0.84
SMAD9-204ENST00000483941 HTN3P15516 51 aa9.82□□□□□ -0.84
SMAD9-204ENST00000483941 SMAGPQ0VAQ4 97 aa9.82□□□□□ -0.84
SMAD9-204ENST00000483941 COTL1Q14019 142 aa9.82□□□□□ -0.84
SMAD9-204ENST00000483941 MRPL23Q16540 153 aaKnown RBP9.82□□□□□ -0.84
SMAD9-204ENST00000483941 RYR1P21817 5038 aa9.82□□□□□ -0.84
SMAD9-204ENST00000483941 HECTD4Q9Y4D8 3996 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 TRAV26-1A0A087WT03 109 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 GAGE12JA6NER3 117 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 NUDT3O95989 172 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 P0DMU3 169 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 FAM231AP0DMU4 169 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 FAM231CP0DMU5 169 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 GYPEP15421 78 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 AMTP48728 403 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 UBE2D3P61077 147 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 UBE2D2P62837 147 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 GAGE1Q13065 139 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 GAGE4Q13068 117 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 GAGE5Q13069 117 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 GAGE13Q4V321 117 aa9.81□□□□□ -0.84
SMAD9-204ENST00000483941 DEFB131BA0A096LNP1 70 aa9.8□□□□□ -0.84
SMAD9-204ENST00000483941 HBDP02042 147 aa9.8□□□□□ -0.84
SMAD9-204ENST00000483941 NANOS2P60321 138 aaKnown RBP9.8□□□□□ -0.84
SMAD9-204ENST00000483941 Q6ZTC4 211 aa9.8□□□□□ -0.84
SMAD9-204ENST00000483941 HIST3H2BBQ8N257 126 aa9.8□□□□□ -0.84
SMAD9-204ENST00000483941 GTSF1LQ9H1H1 148 aa9.8□□□□□ -0.84
SMAD9-204ENST00000483941 HSPB8Q9UJY1 196 aa9.8□□□□□ -0.84
SMAD9-204ENST00000483941 ICOSQ9Y6W8 199 aa9.8□□□□□ -0.84
SMAD9-204ENST00000483941 NACAE9PAV3 2078 aa9.79□□□□□ -0.84
SMAD9-204ENST00000483941 ATP6V0E2Q8NHE4 81 aa9.79□□□□□ -0.84
SMAD9-204ENST00000483941 URB1-AS1Q96HZ7 61 aa9.79□□□□□ -0.84
SMAD9-204ENST00000483941 DNAH10Q8IVF4 4471 aa9.79□□□□□ -0.84
SMAD9-204ENST00000483941 LINC00310P59036 64 aa9.78□□□□□ -0.84
SMAD9-204ENST00000483941 IGHV1-24A0A0C4DH33 117 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 A0A0J9YY99 117 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 NUPR1O60356 82 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 LEPROTL1O95214 131 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 TSHBP01222 138 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 LINC00694P0DN24 101 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 BTF3P20290 206 aaKnown RBP9.77□□□□□ -0.85
SMAD9-204ENST00000483941 PDZD11Q5EBL8 140 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 NEGR1Q7Z3B1 354 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 C15orf53Q8NAA6 179 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 VSIG2Q96IQ7 327 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 CYSLTR1Q9Y271 337 aa9.77□□□□□ -0.85
SMAD9-204ENST00000483941 KMT2AQ03164 3969 aa9.76□□□□□ -0.85
SMAD9-204ENST00000483941 TRBV25-1A0A075B6N4 114 aa9.76□□□□□ -0.85
SMAD9-204ENST00000483941 H7C423 109 aa9.76□□□□□ -0.85
SMAD9-204ENST00000483941 ATP5LO75964 103 aa9.76□□□□□ -0.85
SMAD9-204ENST00000483941 FABP4P15090 132 aa9.76□□□□□ -0.85
SMAD9-204ENST00000483941 FAM19A2Q8N3H0 131 aa9.76□□□□□ -0.85
SMAD9-204ENST00000483941 PHLDA1Q8WV24 401 aaPredicted RBP9.76□□□□□ -0.85
SMAD9-204ENST00000483941 HIST1H2BLQ99880 126 aa9.76□□□□□ -0.85
SMAD9-204ENST00000483941 NPSP0C0P6 89 aa9.75□□□□□ -0.85
SMAD9-204ENST00000483941 PKIAP61925 76 aa9.75□□□□□ -0.85
SMAD9-204ENST00000483941 PAPPA-AS1Q5QFB9 102 aa9.75□□□□□ -0.85
SMAD9-204ENST00000483941 TOMM6Q96B49 74 aa9.75□□□□□ -0.85
SMAD9-204ENST00000483941 Q9UF83 564 aa9.75□□□□□ -0.85
SMAD9-204ENST00000483941 IGHV3-38A0A0C4DH36 116 aa9.74□□□□□ -0.85
SMAD9-204ENST00000483941 LOC100131303A0A0U1RQF7 123 aa9.74□□□□□ -0.85
SMAD9-204ENST00000483941 UBE2L6O14933 153 aa9.74□□□□□ -0.85
SMAD9-204ENST00000483941 AKR1D1P51857 326 aa9.74□□□□□ -0.85
SMAD9-204ENST00000483941 TIRAPP58753 221 aa9.74□□□□□ -0.85
SMAD9-204ENST00000483941 C2orf66Q6UXQ4 117 aa9.74□□□□□ -0.85
SMAD9-204ENST00000483941 C20orf203Q8NBC4 194 aa9.74□□□□□ -0.85
SMAD9-204ENST00000483941 MAP1LC3CQ9BXW4 147 aa9.74□□□□□ -0.85
SMAD9-204ENST00000483941 TRBV6-8A0A0A6YYG3 113 aa9.73□□□□□ -0.85
SMAD9-204ENST00000483941 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.73□□□□□ -0.85
SMAD9-204ENST00000483941 ERASQ7Z444 233 aa9.73□□□□□ -0.85
SMAD9-204ENST00000483941 TMEM141Q96I45 108 aa9.73□□□□□ -0.85
SMAD9-204ENST00000483941 SCGB3A1Q96QR1 104 aa9.73□□□□□ -0.85
SMAD9-204ENST00000483941 TMEM243Q9BU79 118 aa9.73□□□□□ -0.85
SMAD9-204ENST00000483941 PMCHL1Q16048 86 aa9.72□□□□□ -0.85
SMAD9-204ENST00000483941 TIMM17AQ99595 171 aa9.72□□□□□ -0.85
SMAD9-204ENST00000483941 SPANXA1Q9NS26 97 aa9.72□□□□□ -0.85
SMAD9-204ENST00000483941 A0A096LPF7 62 aa9.71□□□□□ -0.86
SMAD9-204ENST00000483941 Q6ZN92 141 aa9.71□□□□□ -0.86
SMAD9-204ENST00000483941 IFI27L1Q96BM0 104 aa9.71□□□□□ -0.86
SMAD9-204ENST00000483941 TIMM21Q9BVV7 248 aa9.71□□□□□ -0.86
SMAD9-204ENST00000483941 KLK5Q9Y337 293 aaPredicted RBP9.71□□□□□ -0.86
SMAD9-204ENST00000483941 PYGO1Q9Y3Y4 419 aa9.71□□□□□ -0.86
SMAD9-204ENST00000483941 A0A096LNJ9 63 aa9.7□□□□□ -0.86
SMAD9-204ENST00000483941 C20orf202A1L168 122 aa9.7□□□□□ -0.86
SMAD9-204ENST00000483941 NUPR2A6NF83 97 aa9.7□□□□□ -0.86
SMAD9-204ENST00000483941 ZNF25P17030 456 aaPredicted RBP9.7□□□□□ -0.86
SMAD9-204ENST00000483941 TCTAP57738 103 aa9.7□□□□□ -0.86
SMAD9-204ENST00000483941 LELP1Q5T871 98 aa9.7□□□□□ -0.86
SMAD9-204ENST00000483941 DGAT2L7PQ6IED9 249 aa9.7□□□□□ -0.86
SMAD9-204ENST00000483941 OR10D4PQ8NGN7 298 aa9.7□□□□□ -0.86
SMAD9-204ENST00000483941 TMEM101Q96IK0 257 aa9.7□□□□□ -0.86
SMAD9-204ENST00000483941 CHCHD7Q9BUK0 85 aa9.7□□□□□ -0.86
SMAD9-204ENST00000483941 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
SMAD9-204ENST00000483941 IFITM10A6NMD0 228 aa9.69□□□□□ -0.86
SMAD9-204ENST00000483941 AMMECR1LQ6DCA0 310 aa9.69□□□□□ -0.86
SMAD9-204ENST00000483941 CHCHD5Q9BSY4 110 aa9.69□□□□□ -0.86
SMAD9-204ENST00000483941 CSDC2Q9Y534 153 aaKnown RBP9.69□□□□□ -0.86
SMAD9-204ENST00000483941 LOC105371267A0A1B0GV96 52 aa9.68□□□□□ -0.86
SMAD9-204ENST00000483941 PRSS1P07477 247 aa9.68□□□□□ -0.86
SMAD9-204ENST00000483941 KRTDAPP60985 99 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms