RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-206ENST00000482745 ZNF688P0C7X2 276 aa7.36□□□□□ -1.23
HLA-DQA1-206ENST00000482745 GLMPQ8WWB7 406 aa7.36□□□□□ -1.23
HLA-DQA1-206ENST00000482745 RNF125Q96EQ8 232 aa7.36□□□□□ -1.23
HLA-DQA1-206ENST00000482745 C17orf77Q96MU5 243 aa7.36□□□□□ -1.23
HLA-DQA1-206ENST00000482745 U3KQE9 123 aa7.36□□□□□ -1.23
HLA-DQA1-206ENST00000482745 MYMXA0A1B0GTQ4 84 aa7.35□□□□□ -1.23
HLA-DQA1-206ENST00000482745 STHQ8IWL8 128 aa7.35□□□□□ -1.23
HLA-DQA1-206ENST00000482745 TRAV12-1A0A0B4J245 112 aa7.34□□□□□ -1.23
HLA-DQA1-206ENST00000482745 M0R3E3 92 aa7.34□□□□□ -1.23
HLA-DQA1-206ENST00000482745 DCANP1Q8TF63 244 aa7.34□□□□□ -1.23
HLA-DQA1-206ENST00000482745 SS18L2Q9UHA2 77 aa7.34□□□□□ -1.23
HLA-DQA1-206ENST00000482745 IGLV2-18A0A075B6J9 118 aa7.34□□□□□ -1.23
HLA-DQA1-206ENST00000482745 LAGE3Q14657 143 aa7.34□□□□□ -1.23
HLA-DQA1-206ENST00000482745 LCE6AA0A183 80 aa7.33□□□□□ -1.24
HLA-DQA1-206ENST00000482745 KNCNA6PVL3 124 aa7.33□□□□□ -1.24
HLA-DQA1-206ENST00000482745 BUB3O43684 328 aa7.33□□□□□ -1.24
HLA-DQA1-206ENST00000482745 UBE2D3P61077 147 aa7.33□□□□□ -1.24
HLA-DQA1-206ENST00000482745 UBE2D2P62837 147 aa7.33□□□□□ -1.24
HLA-DQA1-206ENST00000482745 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
HLA-DQA1-206ENST00000482745 F8VRH5 84 aa7.33□□□□□ -1.24
HLA-DQA1-206ENST00000482745 H7C1H1 209 aa7.33□□□□□ -1.24
HLA-DQA1-206ENST00000482745 UBE2D1P51668 147 aa7.33□□□□□ -1.24
HLA-DQA1-206ENST00000482745 PRSS29PA6NIE9 313 aa7.32□□□□□ -1.24
HLA-DQA1-206ENST00000482745 PSMB2P49721 201 aa7.32□□□□□ -1.24
HLA-DQA1-206ENST00000482745 SPANXA1Q9NS26 97 aa7.32□□□□□ -1.24
HLA-DQA1-206ENST00000482745 SACSQ9NZJ4 4579 aa7.32□□□□□ -1.24
HLA-DQA1-206ENST00000482745 A8MWV9 139 aa7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 SNRPD3P62318 126 aaKnown RBP7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 TRPT1Q86TN4 253 aaKnown RBP7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 CARD19Q96LW7 228 aa7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 LOC107984156A0A0G2JMH3 177 aa7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 LINC01549A6NIU2 74 aa7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 M0QXV9 152 aa7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 ASIPP42127 132 aa7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 ARL17AQ8IVW1 177 aa7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 MSRB1Q9NZV6 116 aa7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 RYR2Q92736 4967 aa7.31□□□□□ -1.24
HLA-DQA1-206ENST00000482745 IGKV2-40A0A087WW87 121 aaPredicted RBP7.3□□□□□ -1.24
HLA-DQA1-206ENST00000482745 GAS8-AS1O95177 125 aa7.3□□□□□ -1.24
HLA-DQA1-206ENST00000482745 IGKV2D-40P01614 121 aaPredicted RBP7.3□□□□□ -1.24
HLA-DQA1-206ENST00000482745 TMEM78Q5T7P6 136 aa7.3□□□□□ -1.24
HLA-DQA1-206ENST00000482745 FABP5P3A8MUU1 101 aa7.3□□□□□ -1.24
HLA-DQA1-206ENST00000482745 B5MCH6 92 aa7.3□□□□□ -1.24
HLA-DQA1-206ENST00000482745 RHODO00212 210 aa7.3□□□□□ -1.24
HLA-DQA1-206ENST00000482745 ORM1P02763 201 aa7.3□□□□□ -1.24
HLA-DQA1-206ENST00000482745 ZNF80P51504 273 aaPredicted RBP7.3□□□□□ -1.24
HLA-DQA1-206ENST00000482745 TRBV7-9A0A0J9YWB2 115 aa7.29□□□□□ -1.24
HLA-DQA1-206ENST00000482745 DEFB4AO15263 64 aa7.29□□□□□ -1.24
HLA-DQA1-206ENST00000482745 RPL7P18124 248 aaKnown RBP7.29□□□□□ -1.24
HLA-DQA1-206ENST00000482745 ZNF575Q86XF7 245 aa7.29□□□□□ -1.24
HLA-DQA1-206ENST00000482745 NUPR2A6NF83 97 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 GIG44P09565 113 aaPredicted RBP7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 GATA1P15976 413 aaPredicted RBP7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 NRACQ8N912 160 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 PTH2Q96A98 100 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 ALMS1Q8TCU4 4167 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 GAGE12JA6NER3 117 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 GAGE7O76087 117 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 GAGE12FP0CL80 117 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 GAGE12GP0CL81 117 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 GAGE12IP0CL82 117 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 ID1P41134 155 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 NDUFV3P56181 108 aaKnown RBP7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 DEFB1P60022 68 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 GAGE4Q13068 117 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 SRSF9Q13242 221 aaKnown RBP eCLIP7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 Q6Q795 121 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 SCGB1D4Q6XE38 83 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 Q8TAT8 98 aa7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 C11orf68Q9H3H3 251 aaKnown RBP7.28□□□□□ -1.24
HLA-DQA1-206ENST00000482745 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 SNCGO76070 127 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 TCL1BO95988 128 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 GAGE2BQ13066 116 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 GAGE2EQ4V326 116 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 ZFP2Q6ZN57 461 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 ANKRD29Q8N6D5 301 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 PRADC1Q9BSG0 188 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 GAGE2DQ9UEU5 116 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 PLECQ15149 4684 aaKnown RBP7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 DNAH1Q9P2D7 4330 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 H3BMM0 161 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 IGKV3-20P01619 116 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 PRB4P10163 310 aaPredicted RBP7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 NANOS2P60321 138 aaKnown RBP7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 CEMP1Q6PRD7 247 aaPredicted RBP7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 NEXN-AS1Q8NBZ9 246 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 TOMM6Q96B49 74 aa7.27□□□□□ -1.25
HLA-DQA1-206ENST00000482745 SOCS3O14543 225 aa7.26□□□□□ -1.25
HLA-DQA1-206ENST00000482745 SCGB1C2P0DMR2 95 aa7.26□□□□□ -1.25
HLA-DQA1-206ENST00000482745 Q8NAQ8 132 aa7.26□□□□□ -1.25
HLA-DQA1-206ENST00000482745 C11orf45Q8TAV5 145 aa7.26□□□□□ -1.25
HLA-DQA1-206ENST00000482745 SCGB3A1Q96QR1 104 aa7.26□□□□□ -1.25
HLA-DQA1-206ENST00000482745 SMIM2Q9BVW6 85 aa7.26□□□□□ -1.25
HLA-DQA1-206ENST00000482745 XCL2Q9UBD3 114 aa7.26□□□□□ -1.25
HLA-DQA1-206ENST00000482745 IGHV4-28A0A0C4DH34 117 aa7.25□□□□□ -1.25
HLA-DQA1-206ENST00000482745 IFITM1P13164 125 aa7.25□□□□□ -1.25
HLA-DQA1-206ENST00000482745 RPL32P62910 135 aaKnown RBP7.25□□□□□ -1.25
HLA-DQA1-206ENST00000482745 C16orf92Q96LL3 132 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms